[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 182 items for (author: nelson & e)

EMDB-41423:
Cryo-EM structure of DDB1dB:CRBN:Pomalidomide:SD40
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-41424:
Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 1
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-41425:
Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 2
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-41777:
Map from local refinement (focused on CRBN) of DDB1dB:CRBN:Pomalidomide:SD40
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-41778:
Map from local refinement (focused on CRBN) of DDB1dB:CRBN:PT-179:SD40, conformation 1
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-41779:
Map from local refinement (focused on CRBN) of DDB1dB:CRBN:PT-179:SD40, conformation 2
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

PDB-8tnp:
Cryo-EM structure of DDB1dB:CRBN:Pomalidomide:SD40
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

PDB-8tnq:
Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 1
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

PDB-8tnr:
Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 2
Method: single particle / : Roy Burman SS, Hunkeler M, Fischer ES

EMDB-16732:
Cryo-EM structure of the Photosystem I - LHCI supercomplex from Coelastrella sp.
Method: single particle / : Fadeeva M, Klaiman D, Nelson N

PDB-8cmo:
Cryo-EM structure of the Photosystem I - LHCI supercomplex from Coelastrella sp.
Method: single particle / : Fadeeva M, Klaiman D, Nelson N

EMDB-18848:
Cryo-EM Structure of native Photosystem II assembly intermediate fromChlamydomonas reinhardtii
Method: single particle / : Fadeeva M, Klaiman D, Kandiah E, Nelson N

PDB-8r2i:
Cryo-EM Structure of native Photosystem II assembly intermediate from Chlamydomonas reinhardtii
Method: single particle / : Fadeeva M, Klaiman D, Kandiah E, Nelson N

EMDB-40711:
CryoEM structure of Western equine encephalitis virus VLP in complex with the chimeric Du-D1-Mo-D2 MXRA8 receptor
Method: single particle / : Zimmerman MI, Fremont DH, Center for Structural Genomics of Infectious Diseases (CSGID)

PDB-8sqn:
CryoEM structure of Western equine encephalitis virus VLP in complex with the chimeric Du-D1-Mo-D2 MXRA8 receptor
Method: single particle / : Zimmerman MI, Fremont DH, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-27272:
CryoEM structure of Western equine encephalitis virus VLP
Method: single particle / : Zimmerman MI, Fremont DH

EMDB-27271:
CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor
Method: single particle / : Zimmerman MI, Fremont DH

EMDB-15969:
Photosystem I assembly intermediate of Avena sativa
Method: single particle / : Naschberger A, Amunts A, Nelson N

EMDB-15970:
Photosystem I assembly intermediate of Avena sativa
Method: single particle / : Naschberger A, Amunts A, Nelson N

PDB-8bcv:
Photosystem I assembly intermediate of Avena sativa
Method: single particle / : Naschberger A, Amunts A, Nelson N

PDB-8bcw:
Photosystem I assembly intermediate of Avena sativa
Method: single particle / : Naschberger A, Amunts A, Nelson N

EMDB-28644:
CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor
Method: single particle / : Zimmerman MI, Fremont DH, Center for Structural Genomics of Infectious Diseases (CSGID)

EMDB-15973:
Cryo-EM structure of the Photosystem II - LHCII supercomplex from Chlorella ohadi
Method: single particle / : Fadeeva M, Klaiman D, Caspy I, Nelson N

PDB-8bd3:
Cryo-EM structure of the Photosystem II - LHCII supercomplex from Chlorella ohadi
Method: single particle / : Fadeeva M, Klaiman D, Caspy I, Nelson N

EMDB-15882:
Mp2Ba1 pre-pore
Method: single particle / : Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry J, Altier D, Lum A, Scolaro E, Perez Ortega C, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu A, Nelson ME, Eswar N, Topf M, Saibil HR

EMDB-15883:
Mpf2Ba1 pore
Method: single particle / : Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry J, Altier D, Lum A, Scolaro E, Perez Ortega C, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu A, Nelson ME, Eswar N, Topf M, Saibil HR

PDB-8b6v:
Mp2Ba1 pre-pore
Method: single particle / : Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry J, Altier D, Lum A, Scolaro E, Perez Ortega C, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu A, Nelson ME, Eswar N, Topf M, Saibil HR

PDB-8b6w:
Mpf2Ba1 pore
Method: single particle / : Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry J, Altier D, Lum A, Scolaro E, Perez Ortega C, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu A, Nelson ME, Eswar N, Topf M, Saibil HR

EMDB-14248:
Chlamydomonas reinhardtii TSP9 mutant small Photosystem I complex
Method: single particle / : Klaiman D, Schwartz T, Nelson N

PDB-7r3k:
Chlamydomonas reinhardtii TSP9 mutant small Photosystem I complex
Method: single particle / : Klaiman D, Schwartz T, Nelson N

EMDB-29377:
AAV1 VP3 Only Capsid
Method: single particle / : Mietzsch M, McKenna R

PDB-8fq4:
AAV1 VP3 Only Capsid
Method: single particle / : Mietzsch M, McKenna R

EMDB-13429:
Unstacked compact Dunaliella PSII
Method: single particle / : Caspy I, Fadeeva M, Mazor Y, Nelson N

EMDB-13430:
Unstacked stretched Dunaliella PSII
Method: single particle / : Caspy I, Fadeeva M, Mazor Y, Nelson N

EMDB-13444:
Stacked compact Dunaliella PSII
Method: single particle / : Caspy I, Fadeeva M, Mazor Y, Nelson N

EMDB-13455:
Stacked stretched Dunaliella PSII
Method: single particle / : Caspy I, Fadeeva M, Mazor Y, Nelson N

EMDB-13548:
Unstacked compact Dunaliella PSII
Method: single particle / : Caspy I, Fadeeva M, Mazor Y, Nelson N

PDB-7pi0:
Unstacked compact Dunaliella PSII
Method: single particle / : Caspy I, Fadeeva M, Mazor Y, Nelson N

PDB-7pi5:
Unstacked stretched Dunaliella PSII
Method: single particle / : Caspy I, Fadeeva M, Mazor Y, Nelson N

PDB-7pin:
Stacked compact Dunaliella PSII
Method: single particle / : Caspy I, Fadeeva M, Mazor Y, Nelson N

PDB-7piw:
Stacked stretched Dunaliella PSII
Method: single particle / : Caspy I, Fadeeva M, Mazor Y, Nelson N

PDB-7pnk:
Unstacked compact Dunaliella PSII
Method: single particle / : Caspy I, Fadeeva M, Mazor Y, Nelson N

EMDB-24060:
Structure of the SARS-CoV-2 Spike trimer with all RBDs down in complex with the Fab fragment of human neutralizing antibody clone 6
Method: single particle / : Hu Y, Xiong Y

EMDB-24061:
Structure of the SARS-CoV-2 Spike trimer with two RBDs down in complex with the Fab fragment of human neutralizing antibody clone 6
Method: single particle / : Hu Y, Xiong Y

EMDB-24062:
Structure of the SARS-CoV-2 Spike trimer with one RBD down in complex with the Fab fragment of human neutralizing antibody clone 6
Method: single particle / : Hu Y, Xiong Y

EMDB-24063:
Structure of the SARS-CoV-2 Spike trimer with one RBD down in complex with the Fab fragment of human neutralizing antibody clone 2
Method: single particle / : Hu Y, Xiong Y

EMDB-24064:
Structure of the SARS-CoV-2 Spike trimer with three RBDs up in complex with the Fab fragment of human neutralizing antibody clone 2
Method: single particle / : Hu Y, Xiong Y

PDB-7mw2:
Structure of the SARS-CoV-2 Spike trimer with all RBDs down in complex with the Fab fragment of human neutralizing antibody clone 6
Method: single particle / : Hu Y, Xiong Y

PDB-7mw3:
Structure of the SARS-CoV-2 Spike trimer with two RBDs down in complex with the Fab fragment of human neutralizing antibody clone 6
Method: single particle / : Hu Y, Xiong Y

PDB-7mw4:
Structure of the SARS-CoV-2 Spike trimer with one RBD down in complex with the Fab fragment of human neutralizing antibody clone 6
Method: single particle / : Hu Y, Xiong Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more