[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,639 items for (author: j. & zhang)

PDB-8qqk:
Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs

PDB-8wh5:
Structure of DDM1-nucleosome complex in the apo state

PDB-8wh8:
Structure of DDM1-nucleosome complex in ADP state

PDB-8wh9:
Structure of DDM1-nucleosome complex in ADP-BeFx state

PDB-8wha:
Structure of DDM1-nucleosome complex in the ADP-BeFx state with DDM1 bound to SHL2 and SHL-2

PDB-8whb:
Structure of nucleosome core particle of Arabidopsis thaliana

PDB-8j0f:
GK tetramer with adjacent hooks at reaction state

PDB-8j27:
GK monomer complexes with ADP

PDB-8j0e:
GK monomer complexes with catalytic intermediate

PDB-8j0g:
GK monomer complexes with glutamate and ATP

PDB-9asb:
Structure of human calcium-sensing receptor in complex with chimeric Gq (miniGisq) protein in nanodiscs

PDB-9avg:
Structure of human calcium-sensing receptor in complex with chimeric Gs (miniGis) protein in nanodiscs

PDB-9avl:
Structure of human calcium-sensing receptor in complex with Gi3 protein in nanodiscs

PDB-9axf:
Structure of human calcium-sensing receptor in complex with chimeric Gq (miniGisq) protein in detergent

PDB-9ayf:
Structure of human calcium-sensing receptor in complex with Gi1 (miniGi1) protein in detergent

PDB-8j28:
GK monomer complexes with G5P and ADP

PDB-8wy8:
Cryo-EM structure of DSR2 apo complex

PDB-8wy9:
Cryo-EM structure of DSR2 apo (partial) complex

PDB-8wya:
Cryo-EM structure of DSR2-tube complex

PDB-8wyb:
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ complex

PDB-8wyc:
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ (partial) complex

PDB-8wyd:
Cryo-EM structure of DSR2-DSAD1 complex

PDB-8wye:
Cryo-EM structure of DSR2-DSAD1 (partial) complex

PDB-8wyf:
Cryo-EM structure of DSR2-DSAD1-NAD+ (partial) complex

PDB-9b4h:
Chlamydomonas reinhardtii mastigoneme filament

PDB-8io3:
Cryo-EM structure of human HCN3 channel with cilobradine

PDB-8inz:
Cryo-EM structure of human HCN3 channel in apo state

PDB-8j0n:
cryo-EM structure of human EMC

PDB-8j0o:
cryo-EM structure of human EMC and VDAC

PDB-8jts:
hOCT1 in complex with metformin in outward open conformation

PDB-8jtt:
hOCT1 in complex with metformin in outward occluded conformation

PDB-8jtv:
hOCT1 in complex with metformin in inward occluded conformation

PDB-8jtw:
hOCT1 in complex with nb5660 in inward facing partially open 1 conformation

PDB-8jtx:
hOCT1 in complex with nb5660 in inward facing fully open conformation

PDB-8jty:
hOCT1 in complex with nb5660 in inward facing partially open 2 conformation

PDB-8jtz:
hOCT1 in complex with spironolactone in outward facing partially occluded conformation

PDB-8ju0:
hOCT1 in complex with spironolactone in inward facing occluded conformation

PDB-8iu2:
Cryo-EM structure of Long-wave-sensitive opsin 1

PDB-8woq:
Cryo-EM structure of human SIDT1 protein with C1 symmetry at neutral pH

PDB-8wor:
Cryo-EM structure of human SIDT1 protein with C2 symmetry at neutral pH

PDB-8wos:
Cryo-EM structure of human SIDT1 protein with C1 symmetry at low pH

PDB-8wot:
Cryo-EM structure of human SIDT1 protein with C2 symmetry at low pH

PDB-7xog:
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Postfusion state)

PDB-8tum:
Type IV pilus from Pseudomonas PAO1 strain

PDB-8tuw:
Type IV pilus from Pseudomonas PAO1 strain with PP7 Maturation protein

PDB-8tux:
Capsid of mature PP7 virion with 3'end region of PP7 genomic RNA

PDB-8wcn:
Cryo-EM structure of PAO1-ImcA with GMPCPP

PDB-8tz1:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Ribavirin

PDB-8tz2:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in MSP2N2 nanodiscs, apo state

PDB-8tz3:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with GS-441524, consensus reconstruction

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more