Pairwise fitting emdb-1559 on pdb-5xwy by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-5xwy by gmfit(PID:370660).





RANK[1] Corr.Coeff:0.748

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

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3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-5xwy)

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b'ELECTRON CRYO-MICROSCOPY STRUCTURE OF LBUCAS13A-CRRNA BINARY COMPLEX  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.748
0.713
0.699
0.699
0.692
0.684
0.673
0.671
0.665
0.637







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5xwy"(PDB-format) or 
 "5xwy"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.191463,0.766535,0.612998 131.352365 center 0,0,0 model #1
move 95.775900,-776.420210,-181.796764 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 5xwy)]

[Download the target GMM(emdb 1559)]

[Download gmfit result file(370660)]