Pairwise fitting emdb-1559 on emdb-5220 by gmfit



Pairwise fitting of target emdb-1559 on reference emdb-5220 by gmfit(PID:1352730).

RANK[7] Corr.Coeff:0.545 [JSmol] [Molmil]
TARGET(emdb-1559)
display:
color:
3D structure of human endoglin [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1559)]
REFERENCE(emdb-5220)
display:
color:
The architecture of the DNA polymerase-PCNA-DNA ternary complex [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.607 0.593 0.575 0.562 0.550 0.545 0.545 0.542 0.540 0.522

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5220.map.gz", and read it.
  2. Download the Target map "emd_1559.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.940695,0.339084,0.010774 96.223696 center 0,0,0 model #1
    move -375.344724,-262.819056,780.582911 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!