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Yorodumi- PDB-1clm: STRUCTURE OF PARAMECIUM TETRAURELIA CALMODULIN AT 1.8 ANGSTROMS R... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1clm | ||||||
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Title | STRUCTURE OF PARAMECIUM TETRAURELIA CALMODULIN AT 1.8 ANGSTROMS RESOLUTION | ||||||
Components | CALMODULIN | ||||||
Keywords | CALCIUM-BINDING PROTEIN | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Paramecium tetraurelia (eukaryote) | ||||||
Method | X-RAY DIFFRACTION / Resolution: 1.8 Å | ||||||
Authors | Sundaralingam, M. | ||||||
Citation | Journal: Protein Sci. / Year: 1993 Title: Structure of Paramecium tetraurelia calmodulin at 1.8 A resolution. Authors: Rao, S.T. / Wu, S. / Satyshur, K.A. / Ling, K.Y. / Kung, C. / Sundaralingam, M. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1clm.cif.gz | 42.3 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1clm.ent.gz | 29.6 KB | Display | PDB format |
PDBx/mmJSON format | 1clm.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1clm_validation.pdf.gz | 425.1 KB | Display | wwPDB validaton report |
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Full document | 1clm_full_validation.pdf.gz | 427.3 KB | Display | |
Data in XML | 1clm_validation.xml.gz | 8.8 KB | Display | |
Data in CIF | 1clm_validation.cif.gz | 11.3 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/cl/1clm ftp://data.pdbj.org/pub/pdb/validation_reports/cl/1clm | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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-Components
#1: Protein | Mass: 16687.420 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Paramecium tetraurelia (eukaryote) / References: UniProt: P07463 | ||
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#2: Chemical | ChemComp-CA / #3: Water | ChemComp-HOH / | |
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 2.41 Å3/Da / Density % sol: 49.07 % | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Crystal grow | *PLUS Temperature: 4 ℃ / pH: 5 / Method: vapor diffusion, hanging drop | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Radiation | Scattering type: x-ray |
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Radiation wavelength | Relative weight: 1 |
Reflection | *PLUS Highest resolution: 1.8 Å / Num. all: 15515 / Num. obs: 11458 / % possible obs: 85 % / Observed criterion σ(I): 1.5 / Num. measured all: 53853 / Rmerge(I) obs: 0.07 |
-Processing
Software |
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Refinement | Highest resolution: 1.8 Å / σ(F): 3 /
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Refinement step | Cycle: LAST / Highest resolution: 1.8 Å
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Refine LS restraints |
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Software | *PLUS Name: X-PLOR / Classification: refinement | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement | *PLUS Lowest resolution: 10 Å / Rfactor obs: 0.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints | *PLUS
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