- PDB-5eg1: Antibacterial peptide ABC transporter McjD with a resolved lipid -
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IDまたはキーワード:
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基本情報
登録情報
データベース: PDB / ID: 5eg1
タイトル
Antibacterial peptide ABC transporter McjD with a resolved lipid
要素
Microcin-J25 export ATP-binding/permease protein McjD
キーワード
TRANSPORT PROTEIN (運搬体タンパク質) / membrane protein (膜タンパク質) / ABC transporter / lipid (脂質)
機能・相同性
機能・相同性情報
bacteriocin transport / bacteriocin immunity / ABC-type transporter activity / protein transport / ATP hydrolysis activity / ATP binding / 細胞膜 類似検索 - 分子機能
Type 1 protein exporter / ABC transporter transmembrane region / ABC transporter type 1, transmembrane domain / ABC transporter integral membrane type-1 fused domain profile. / ABC transporter type 1, transmembrane domain superfamily / ABC transporter-like, conserved site / ABC transporters family signature. / ABC transporter / ABC transporter-like, ATP-binding domain / ATP-binding cassette, ABC transporter-type domain profile. ...Type 1 protein exporter / ABC transporter transmembrane region / ABC transporter type 1, transmembrane domain / ABC transporter integral membrane type-1 fused domain profile. / ABC transporter type 1, transmembrane domain superfamily / ABC transporter-like, conserved site / ABC transporters family signature. / ABC transporter / ABC transporter-like, ATP-binding domain / ATP-binding cassette, ABC transporter-type domain profile. / P-loop containing nucleotide triphosphate hydrolases / ATPases associated with a variety of cellular activities / AAA+ ATPase domain / P-loop containing nucleoside triphosphate hydrolase / ロスマンフォールド / 3-Layer(aba) Sandwich / Alpha Beta 類似検索 - ドメイン・相同性
解像度: 3.42→67.61 Å / Cor.coef. Fo:Fc: 0.7807 / Cor.coef. Fo:Fc free: 0.809 / 交差検証法: THROUGHOUT / σ(F): 0 / SU Rfree Blow DPI: 0.513 詳細: Due to low resolution of the data, the ligand head group could either a glycerol or ethanolamine moiety. We assigned it as glycerol since it was supported by our biochemical data. Both head ...詳細: Due to low resolution of the data, the ligand head group could either a glycerol or ethanolamine moiety. We assigned it as glycerol since it was supported by our biochemical data. Both head groups can be refined without the presence of any negative Fo-Fc density