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- SASDFG9: Poly-adenosine rA30 in 2 mM MgCl2 (Poly-adenosine, rA30) -

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Basic information

Entry
Database: SASBDB / ID: SASDFG9
SamplePoly-adenosine rA30 in 2 mM MgCl2
  • Poly-adenosine (RNA), rA30
Contact author
  • Alex Plumridge (Cornell University, Ithaca, NY, United States)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #3397
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3398
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3399
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3400
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3401
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3402
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3403
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3404
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3405
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3406
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3407
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3408
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3409
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3410
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3411
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3412
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3413
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3414
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3415
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)
Model #3416
Type: atomic / Chi-square value: 1.036324 / P-value: 0.640182
Search similar-shape structures of this assembly by Omokage search (details)

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Sample

SampleName: Poly-adenosine rA30 in 2 mM MgCl2 / Specimen concentration: 0.40-1.20
BufferName: 1 mM Na-MOPS, 20 mM NaCl, 2 mM MgCl2, 20 µM EDTA / pH: 7
Entity #1769Name: rA30 / Type: RNA / Description: Poly-adenosine / Formula weight: 9.894 / Num. of mol.: 1
Sequence:
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA

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Experimental information

BeamInstrument name: Cornell High Energy Synchrotron Source (CHESS) G1
City: Ithaca, NY / 国: USA / Type of source: X-ray synchrotron / Wavelength: 0.11 Å / Dist. spec. to detc.: 2.04 mm
DetectorName: Finger Lakes CCD / Type: CCD
Scan
Title: Poly-adenosine rA30 in 2 mM MgCl2 / Measurement date: Oct 24, 2015 / Storage temperature: 4 °C / Cell temperature: 25 °C / Exposure time: 10 sec. / Number of frames: 30 / Unit: 1/A /
MinMax
Q0.01 0.27
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 247 /
MinMax
Q0.024 0.27
P(R) point1 247
R0 100
Result
Type of curve: extrapolated /
ExperimentalPorod
MW11 kDa-
Volume-12 nm3

P(R)GuinierGuinier error
Forward scattering, I037.78 36.91 0.27
Radius of gyration, Rg2.58 nm2.37 nm0.02

MinMax
D-10
Guinier point13 47

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