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- SASDFF9: Poly-adenosine rA30 in 1 mM MgCl2 (Poly-adenosine, rA30) -

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Basic information

Entry
Database: SASBDB / ID: SASDFF9
SamplePoly-adenosine rA30 in 1 mM MgCl2
  • Poly-adenosine (RNA), rA30
Contact author
  • Alex Plumridge (Cornell University, Ithaca, NY, United States)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #3377
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3378
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3379
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3380
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3381
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3382
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3383
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3384
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3385
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3386
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3387
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3388
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3389
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3390
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3391
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3392
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3393
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3394
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3395
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)
Model #3396
Type: atomic / Chi-square value: 1.024144 / P-value: 0.877594
Search similar-shape structures of this assembly by Omokage search (details)

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Sample

SampleName: Poly-adenosine rA30 in 1 mM MgCl2 / Specimen concentration: 0.40-1.20
BufferName: 1 mM Na-MOPS, 20 mM NaCl, 1 mM MgCl2, 20 µM EDTA / pH: 7
Entity #1769Name: rA30 / Type: RNA / Description: Poly-adenosine / Formula weight: 9.894 / Num. of mol.: 1
Sequence:
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA

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Experimental information

BeamInstrument name: Cornell High Energy Synchrotron Source (CHESS) G1
City: Ithaca, NY / 国: USA / Type of source: X-ray synchrotron / Wavelength: 0.11 Å / Dist. spec. to detc.: 2.04 mm
DetectorName: Finger Lakes CCD / Type: CCD
Scan
Title: Poly-adenosine rA30 in 1 mM MgCl2 / Measurement date: Jul 24, 2019 / Storage temperature: 4 °C / Cell temperature: 25 °C / Exposure time: 10 sec. / Number of frames: 30 / Unit: 1/A /
MinMax
Q0.01 0.27
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 242 /
MinMax
Q0.029 0.27
P(R) point1 242
R0 104
Result
Type of curve: extrapolated /
ExperimentalPorod
MW11 kDa-
Volume-12 nm3

P(R)GuinierGuinier error
Forward scattering, I043.28 42.8 0.49
Radius of gyration, Rg2.62 nm2.45 nm0.03

MinMax
D-10.4
Guinier point18 44

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