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- SASDDB9: Structure of Halobacterium salinarum VNG0258H/RosR in the presenc... -
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Open data
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Basic information
Entry | Database: SASBDB / ID: SASDDB9 |
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![]() | Structure of Halobacterium salinarum VNG0258H/RosR in the presence of 2 M NaBr
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Function / homology | Transcription regulator PadR, N-terminal / Transcriptional regulator PadR-like family / Winged helix DNA-binding domain superfamily / Winged helix-like DNA-binding domain superfamily / metal ion binding / PadR family transcription regulator RosR![]() |
Biological species | ![]() |
![]() | ![]() Title: The 3-D structure of VNG0258H/RosR – a haloarchaeal DNA-binding protein in its ionic shell Authors: Kutnowski N / Shmuely H / Dahan I / Shmulevich F / Davidov G / Shahar A / Eichler J / Zarivach R |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
-Models
Model #2137 | ![]() Type: dummy / Radius of dummy atoms: 2.90 A / Chi-square value: 0.837225 / P-value: 0.002142 ![]() |
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Model #2144 | ![]() Type: dummy / Software: (5) / Radius of dummy atoms: 2.00 A / Chi-square value: 0.837225 / P-value: 0.002142 ![]() |
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Sample
![]() | Name: Structure of Halobacterium salinarum VNG0258H/RosR in the presence of 2 M NaBr Specimen concentration: 3 mg/ml |
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Buffer | Name: 50 mM HEPES, 2 M NaBr, 0.02% NaN3 / pH: 7 |
Entity #1169 | Name: VNG0258H/RosR / Type: protein / Description: VNG0258H/RosR / Formula weight: 14.533 / Num. of mol.: 2 / Source: Halobacterium salinarum NRC-1 / References: UniProt: Q9HSF4 Sequence: MSEAQPDARS DARDLTAFQK NILTVLGEEA RYGLAIKREL EEYYGEEVNH GRLYPNLDDL VNKGLVEKSE LDKRTNEYAL TNEGFDAVVD DLEWTLSKFV ADADRRERVE TIVADDAAAL EHHHHHH |
-Experimental information
Beam | Instrument name: ESRF BM29 / City: Grenoble / 国: France ![]() | ||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 1M / Pixsize x: 172 mm | ||||||||||||||||||||||||||||||
Scan | Measurement date: Sep 26, 2015 / Storage temperature: 20 °C / Cell temperature: 20 °C / Exposure time: 1 sec. / Number of frames: 10 / Unit: 1/nm /
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Distance distribution function P(R) |
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Result | Comments: Individual (top) and spatially averaged (DAMFILT, bottom) ab initio models are displayed.
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