+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDC32 |
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Sample | Ethylene Receptor 1 Cytosolic Domain (in 250 mM NDSB)
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Function / homology | Function and homology information ethylene receptor activity / regulation of seedling development / detection of ethylene stimulus / ethylene binding / defense response by callose deposition in cell wall / seed dormancy process / negative regulation of ethylene-activated signaling pathway / sugar mediated signaling pathway / response to gibberellin / response to insect ...ethylene receptor activity / regulation of seedling development / detection of ethylene stimulus / ethylene binding / defense response by callose deposition in cell wall / seed dormancy process / negative regulation of ethylene-activated signaling pathway / sugar mediated signaling pathway / response to gibberellin / response to insect / phloem or xylem histogenesis / response to ethylene / cytokinin metabolic process / response to auxin / regulation of stomatal movement / protein histidine kinase activity / response to abscisic acid / hydrogen peroxide biosynthetic process / histidine kinase / phosphorelay sensor kinase activity / response to salt stress / response to molecule of bacterial origin / defense response / response to heat / defense response to bacterium / cell division / endoplasmic reticulum membrane / endoplasmic reticulum / ATP binding / identical protein binding / metal ion binding Similarity search - Function |
Biological species | Arabidopsis thaliana (thale cress) |
Citation | Date: 2015 Jan 30 Title: Structural Model of the Cytosolic Domain of the Plant Ethylene Receptor 1 (ETR1) Authors: Mayerhofer H / Panneerselvam S / Kaljunen H / Tuukkanen A / Mertens H |
Contact author |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Data source
SASBDB page | SASDC32 |
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-Related structure data
Related structure data | C: citing same article (ref.) |
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Similar structure data |
-External links
Related items in Molecule of the Month |
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-Models
Model #1495 | Type: atomic / Radius of dummy atoms: 1.90 A / Symmetry: P2 / Chi-square value: 2.1316 Search similar-shape structures of this assembly by Omokage search (details) |
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Model #1496 | Type: dummy / Software: (1.44) / Radius of dummy atoms: 4.50 A Comment: Global refinement of GAF-DHp-CA-RD + DHp-CA-RD + DHp-CA data (3 sets) Chi-square value: 1.234321 Search similar-shape structures of this assembly by Omokage search (details) |
-Sample
Sample | Name: Ethylene Receptor 1 Cytosolic Domain (in 250 mM NDSB) / Dry vol: 78367 / Specimen concentration: 0.70-2.70 / Concentration method: A280 |
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Buffer | Name: 20 mM Tris-NDSB 150 mM NaCl 1mM DTT 250 mM NDSB / Concentration: 20.00 mM / pH: 8.8 / Composition: 150 mM NaCl, 1mM DTT, 250 mM NDSB |
Entity #515 | Name: ETR1(-ΔTM) / Type: protein / Description: Ethylene Receptor 1 / Formula weight: 64.555 / Num. of mol.: 2 / Source: Arabidopsis thaliana / References: UniProt: P49333 Sequence: DRHTILKTTL VELGRTLALE ECALWMPTRT GLELQLSYTL RHQHPVEYTV PIQLPVINQV FGTSRAVKIS PNSPVARLRP VSGKYMLGEV VAVRVPLLHL SNFQINDWPE LSTKRYALMV LMLPSDSARQ WHVHELELVE VVADQVAVAL SHAAILEESM RARDLLMEQN ...Sequence: DRHTILKTTL VELGRTLALE ECALWMPTRT GLELQLSYTL RHQHPVEYTV PIQLPVINQV FGTSRAVKIS PNSPVARLRP VSGKYMLGEV VAVRVPLLHL SNFQINDWPE LSTKRYALMV LMLPSDSARQ WHVHELELVE VVADQVAVAL SHAAILEESM RARDLLMEQN VALDLARREA ETAIRARNDF LAVMNHEMRT PMHAIIALSS LLQETELTPE QRLMVETILK SSNLLATLMN DVLDLSRLED GSLQLELGTF NLHTLFREVL NLIKPIAVVK KLPITLNLAP DLPEFVVGDE KRLMQIILNI VGNAVKFSKQ GSISVTALVT KSDTRAADFF VVPTGSHFYL RVKVKDSGAG INPQDIPKIF TKFAQTQSLA TRSSGGSGLG LAISKRFVNL MEGNIWIESD GLGKGCTAIF DVKLGISERS NESKQSGIPK VPAIPRHSNF TGLKVLVMDE NGVSRMVTKG LLVHLGCEVT TVSSNEECLR VVSHEHKVVF MDVCMPGVEN YQIALRIHEK FTKQRHQRPL LVALSGNTDK STKEKCMSFG LDGVLLKPVS LDNIRDVLSD LLEPRVLYEG M |
-Experimental information
Beam | Instrument name: DORIS III X33 / City: Hamburg / 国: Germany / Shape: 0.6 / Type of source: X-ray synchrotron / Wavelength: 0.15 Å / Dist. spec. to detc.: 3.1 mm | ||||||||||||||||||||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 1M-W / Pixsize x: 0.172 mm | ||||||||||||||||||||||||||||||||||||||||||||||||
Scan | Title: ETR1-delTM_NDSB / Measurement date: Mar 19, 2011 / Storage temperature: 10 °C / Cell temperature: 10 °C / Exposure time: 15 sec. / Number of frames: 8 / Unit: 1/nm /
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Distance distribution function P(R) | Sofotware P(R): GNOM 4.6 / Number of points: 400 /
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Result | Type of curve: extrapolated / Standard: BSA / Comments: Cytosolic domain of ETR1 in 250 mM NBSB
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