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- SASDC97: Ethylene Receptor 1 (DHp + CA + RD domains) (Ethylene receptor 1 ... -

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Basic information

Entry
Database: SASBDB / ID: SASDC97
SampleEthylene Receptor 1 (DHp + CA + RD domains)
  • Ethylene receptor 1 dimerization histidine phosphotransfer + catalytic ATP-binding + receiver domains (protein), ETR1_DHp-CA-RD, Arabidopsis thaliana
Function / homology
Function and homology information


ethylene receptor activity / regulation of seedling development / detection of ethylene stimulus / ethylene binding / seed dormancy process / defense response by callose deposition in cell wall / negative regulation of ethylene-activated signaling pathway / sugar mediated signaling pathway / response to gibberellin / phloem or xylem histogenesis ...ethylene receptor activity / regulation of seedling development / detection of ethylene stimulus / ethylene binding / seed dormancy process / defense response by callose deposition in cell wall / negative regulation of ethylene-activated signaling pathway / sugar mediated signaling pathway / response to gibberellin / phloem or xylem histogenesis / response to insect / response to ethylene / cytokinin metabolic process / response to auxin / regulation of stomatal movement / protein histidine kinase activity / response to abscisic acid / hydrogen peroxide biosynthetic process / histidine kinase / phosphorelay sensor kinase activity / response to salt stress / response to molecule of bacterial origin / defense response / response to heat / defense response to bacterium / cell division / endoplasmic reticulum membrane / endoplasmic reticulum / ATP binding / identical protein binding / metal ion binding
Similarity search - Function
Ethylene receptor / His Kinase A (phospho-acceptor) domain / His Kinase A (phosphoacceptor) domain / Signal transduction histidine kinase, dimerisation/phosphoacceptor domain / Signal transduction histidine kinase-related protein, C-terminal / Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily / Histidine kinase domain / Histidine kinase domain profile. / Response regulator receiver domain / cheY-homologous receiver domain ...Ethylene receptor / His Kinase A (phospho-acceptor) domain / His Kinase A (phosphoacceptor) domain / Signal transduction histidine kinase, dimerisation/phosphoacceptor domain / Signal transduction histidine kinase-related protein, C-terminal / Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily / Histidine kinase domain / Histidine kinase domain profile. / Response regulator receiver domain / cheY-homologous receiver domain / Signal transduction response regulator, receiver domain / Response regulatory domain profile. / CheY-like superfamily / GAF domain / Domain present in phytochromes and cGMP-specific phosphodiesterases. / GAF domain / GAF-like domain superfamily / Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase / Histidine kinase-like ATPases / Histidine kinase/HSP90-like ATPase / Histidine kinase/HSP90-like ATPase superfamily
Similarity search - Domain/homology
Biological speciesArabidopsis thaliana (thale cress)
CitationDate: 2015 Jan 30
Title: Structural Model of the Cytosolic Domain of the Plant Ethylene Receptor 1 (ETR1)
Authors: Mayerhofer H / Panneerselvam S / Kaljunen H / Tuukkanen A / Mertens H
Contact author
  • Haydyn Mertens (EMBL-Hamburg, European Molecular Biology Laboratory (EMBL) - Hamburg outstation, Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany)

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Structure visualization

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Models

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Sample

SampleName: Ethylene Receptor 1 (DHp + CA + RD domains) / Dry vol: 53494 / Specimen concentration: 0.70-5.00 / Concentration method: A280
BufferName: 20 mM Tris 150 mM NaCl 1 mM DTT 5 mM ADP / pH: 8.8
Entity #777Name: ETR1_DHp-CA-RD / Type: protein
Description: Ethylene receptor 1 dimerization histidine phosphotransfer + catalytic ATP-binding + receiver domains
Formula weight: 44.085 / Num. of mol.: 2 / Source: Arabidopsis thaliana / References: UniProt: P49333
Sequence: TAIRARNDFL AVMNHEMRTP MHAIIALSSL LQETELTPEQ RLMVETILKS SNLLATLMND VLDLSRLEDG SLQLELGTFN LHTLFREVLN LIKPIAVVKK LPITLNLAPD LPEFVVGDEK RLMQIILNIV GNAVKFSKQG SISVTALVTK SDTRAADFFV VPTGSHFYLR ...Sequence:
TAIRARNDFL AVMNHEMRTP MHAIIALSSL LQETELTPEQ RLMVETILKS SNLLATLMND VLDLSRLEDG SLQLELGTFN LHTLFREVLN LIKPIAVVKK LPITLNLAPD LPEFVVGDEK RLMQIILNIV GNAVKFSKQG SISVTALVTK SDTRAADFFV VPTGSHFYLR VKVKDSGAGI NPQDIPKIFT KFAQTQSLAT RSSGGSGLGL AISKRFVNLM EGNIWIESDG LGKGCTAIFD VKLGISERSN ESKQSGIPKV PAIPRHSNFT GLKVLVMDEN GVSRMVTKGL LVHLGCEVTT VSSNEECLRV VSHEHKVVFM DVCMPGVENY QIALRIHEKF TKQRHQRPLL VALSGNTDKS TKEKCMSFGL DGVLLKPVSL DNIRDVLSDL LEPRVLYEGM

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Experimental information

BeamInstrument name: DORIS III X33 / City: Hamburg / 国: Germany / Shape: 0.6 / Type of source: X-ray synchrotron / Wavelength: 0.154 Å / Dist. spec. to detc.: 3.1 mm
DetectorName: Pilatus 1M-W / Pixsize x: 0.172 mm
Scan
Title: ETR1_DHp-CA-RD / Measurement date: Oct 11, 2010 / Storage temperature: 10 °C / Cell temperature: 10 °C / Exposure time: 15 sec. / Number of frames: 8 / Unit: 1/nm /
MinMax
Q0.1383 6.0155
Distance distribution function P(R)
Sofotware P(R): GNOM 4.5a / Number of points: 349 /
MinMax
Q0.1397 2.044
P(R) point30 378
R0 13.69
Result
Type of curve: extrapolated
ExperimentalExperimental errorStandardStandard errorPorodPorod error
MW90.1 kDa24 66.4 kDa5 90.1 kDa24
Volume----144 nm34

P(R)P(R) errorGuinierGuinier error
Forward scattering, I063.6999999997 5 68.19 1
Radius of gyration, Rg4.1 nm0.1 3.98 nm0.1

MinMaxError
D-13.9 0.5
Guinier point1 71 -

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