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- PDB-9ybz: CRYSTAL STRUCTURE OF THE A149T VARIANT OF SERINE HYDROXYMETHYLTRA... -

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Basic information

Entry
Database: PDB / ID: 9ybz
TitleCRYSTAL STRUCTURE OF THE A149T VARIANT OF SERINE HYDROXYMETHYLTRANSFERASE 8 FROM SOYBEAN CULTIVAR ESSEX IN COMPLEX WITH PLP
ComponentsSerine hydroxymethyltransferase
KeywordsTRANSFERASE / enzyme / missense variant
Function / homology
Function and homology information


glycine hydroxymethyltransferase / glycine hydroxymethyltransferase activity / : / tetrahydrofolate interconversion / methyltransferase activity / pyridoxal phosphate binding / methylation
Similarity search - Function
Serine hydroxymethyltransferase, pyridoxal phosphate binding site / Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. / : / Serine hydroxymethyltransferase / Serine hydroxymethyltransferase-like domain / Serine hydroxymethyltransferase / Pyridoxal phosphate-dependent transferase, small domain / Pyridoxal phosphate-dependent transferase, major domain / Pyridoxal phosphate-dependent transferase
Similarity search - Domain/homology
Serine hydroxymethyltransferase
Similarity search - Component
Biological speciesGlycine max (soybean)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.28 Å
AuthorsBeamer, L.J. / Samarakoon, V. / Owuocha, L.F.
Funding support United States, 1items
OrganizationGrant numberCountry
National Science Foundation (NSF, United States)IOS 2152548 United States
CitationJournal: FEBS J / Year: 2026
Title: Oligomeric defects in soybean serine hydroxymethyltransferase 8: tetramer destabilization by A149T and other variants associated with soybean cyst nematode resistance.
Authors: Vindya Samarakoon / David P Buckley / Luckio F Owuocha / Clarissa L Durie / Melissa G Mitchum / Lesa J Beamer /
Abstract: Serine hydroxymethyltransferase (SHMT) is a conserved enzyme in folate-mediated one-carbon metabolism, where it contributes to nucleotide biosynthesis, methylation capacity, and cellular stress ...Serine hydroxymethyltransferase (SHMT) is a conserved enzyme in folate-mediated one-carbon metabolism, where it contributes to nucleotide biosynthesis, methylation capacity, and cellular stress responses. Amino acid polymorphisms of soybean SHMT8 are known to affect the resistance of soybean to its primary pathogen, the soybean cyst nematode (SCN). A set of SHMT8 variants from ethyl methanesulfonate (EMS)-mutagenized soybean populations has been identified with varying resistance phenotypes, but their biochemical consequences remain poorly understood. Here, we use biochemical and structural studies to assess the impacts of the A149T variant on soybean SHMT8. Despite the conservative nature of the substitution, A149T reduces folate binding, pyridoxal-5'-phosphate-dependent catalysis, and thermal stability. High-resolution crystal structures (1.9-2.3 Å resolution) reveal only very minor structural changes. However, while the usual tetrameric assembly of the enzyme is retained at the high protein concentration in crystals, multiple other methods including a 2.9 Å cryo-electron microscopy (cryo-EM) structure show that the A149T variant is predominantly a dimer. Significant structural changes in the dimer are consistent with the observed biochemical impacts of the variant and help explain the well-known reduction in activity associated with dimerization of SHMT in other systems. We also find destabilization of the tetrameric assembly in other SHMT8 variants associated with changes in SCN resistance, suggesting that weakened oligomerization may be a common consequence of such mutations. Together, these results highlight quaternary structure as a critical determinant of SHMT8 activity and stability and suggest a potential mechanistic link between enzyme biochemistry and soybean defense.
History
DepositionSep 17, 2025Deposition site: RCSB / Processing site: RCSB
Revision 1.0Apr 8, 2026Provider: repository / Type: Initial release
Revision 2.0May 6, 2026Group: Advisory / Atomic model ...Advisory / Atomic model / Database references / Derived calculations / Polymer sequence / Refinement description / Source and taxonomy / Structure summary
Category: atom_site / atom_site_anisotrop ...atom_site / atom_site_anisotrop / entity / entity_poly / entity_poly_seq / entity_src_gen / pdbx_modification_feature / pdbx_poly_seq_scheme / pdbx_struct_mod_residue / pdbx_struct_sheet_hbond / pdbx_unobs_or_zero_occ_atoms / pdbx_unobs_or_zero_occ_residues / struct_conf / struct_conn / struct_mon_prot_cis / struct_ncs_dom_lim / struct_ref_seq / struct_ref_seq_dif / struct_sheet_range
Item: _atom_site.label_seq_id / _atom_site_anisotrop.pdbx_label_seq_id ..._atom_site.label_seq_id / _atom_site_anisotrop.pdbx_label_seq_id / _entity.formula_weight / _entity_poly.pdbx_seq_one_letter_code / _entity_poly.pdbx_seq_one_letter_code_can / _entity_src_gen.pdbx_end_seq_num / _pdbx_modification_feature.label_seq_id / _pdbx_struct_mod_residue.label_seq_id / _pdbx_struct_sheet_hbond.range_1_label_seq_id / _pdbx_struct_sheet_hbond.range_2_label_seq_id / _pdbx_unobs_or_zero_occ_atoms.label_seq_id / _struct_conf.beg_label_seq_id / _struct_conf.end_label_seq_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_label_seq_id / _struct_mon_prot_cis.label_seq_id / _struct_mon_prot_cis.pdbx_label_seq_id_2 / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_label_seq_id / _struct_ref_seq.seq_align_beg / _struct_ref_seq.seq_align_end / _struct_sheet_range.beg_label_seq_id / _struct_sheet_range.end_label_seq_id
Revision 2.1May 13, 2026Group: Database references / Category: citation / citation_author
Item: _citation.country / _citation.journal_abbrev ..._citation.country / _citation.journal_abbrev / _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.pdbx_database_id_DOI / _citation.pdbx_database_id_PubMed / _citation.title / _citation.year

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Serine hydroxymethyltransferase
B: Serine hydroxymethyltransferase
C: Serine hydroxymethyltransferase
D: Serine hydroxymethyltransferase
E: Serine hydroxymethyltransferase
F: Serine hydroxymethyltransferase


Theoretical massNumber of molelcules
Total (without water)329,7066
Polymers329,7066
Non-polymers00
Water3,585199
1
A: Serine hydroxymethyltransferase
B: Serine hydroxymethyltransferase
C: Serine hydroxymethyltransferase
D: Serine hydroxymethyltransferase


Theoretical massNumber of molelcules
Total (without water)219,8044
Polymers219,8044
Non-polymers00
Water724
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
2
E: Serine hydroxymethyltransferase
F: Serine hydroxymethyltransferase

E: Serine hydroxymethyltransferase
F: Serine hydroxymethyltransferase


Theoretical massNumber of molelcules
Total (without water)219,8044
Polymers219,8044
Non-polymers00
Water724
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
crystal symmetry operation6_555-x,-x+y,-z+1/31
Unit cell
Length a, b, c (Å)174.318, 174.318, 184.208
Angle α, β, γ (deg.)90.000, 90.000, 120.000
Int Tables number152
Space group name H-MP3121
Space group name HallP312"
Symmetry operation#1: x,y,z
#2: -y,x-y,z+1/3
#3: -x+y,-x,z+2/3
#4: x-y,-y,-z+2/3
#5: -x,-x+y,-z+1/3
#6: y,x,-z
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails (eV)
d_1ens_1(chain "A" and ((resid 0 through 3 and (name N...
d_2ens_1(chain "B" and ((resid 0 through 3 and (name N...
d_3ens_1(chain "C" and ((resid 0 through 3 and (name N...
d_4ens_1(chain "D" and ((resid 0 through 3 and (name N...
d_5ens_1(chain "E" and ((resid 0 through 3 and (name N...
d_6ens_1(chain "F" and (resid 0 through 16 or (resid 17...

NCS domain segments:

Ens-ID: ens_1

Dom-IDComponent-IDBeg auth comp-IDBeg label comp-IDEnd auth comp-IDEnd label comp-IDAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
d_11ASNASNSERSERAA0 - 6025 - 85
d_12TYRTYRGLYGLYAA69 - 25994 - 284
d_13ASNASNVALVALAA270 - 376295 - 401
d_14VALVALTYRTYRAA388 - 469413 - 494
d_21ASNASNGLYGLYBB0 - 25925 - 284
d_22ASNASNVALVALBB270 - 376295 - 401
d_23VALVALTYRTYRBB388 - 469413 - 494
d_31ASNASNSERSERCC0 - 6025 - 85
d_32TYRTYRGLYGLYCC69 - 25994 - 284
d_33ASNASNVALVALCC270 - 376295 - 401
d_34VALVALTYRTYRCC388 - 469413 - 494
d_41ASNASNSERSERDD0 - 6025 - 85
d_42TYRTYRGLYGLYDD69 - 25994 - 284
d_43ASNASNVALVALDD270 - 376295 - 401
d_44VALVALTYRTYRDD388 - 469413 - 494
d_51ASNASNSERSEREE0 - 6025 - 85
d_52TYRTYRGLYGLYEE69 - 25994 - 284
d_53ASNASNVALVALEE270 - 376295 - 401
d_54VALVALTYRTYREE388 - 469413 - 494
d_61ASNASNSERSERFF0 - 6025 - 85
d_62TYRTYRVALVALFF69 - 37694 - 401
d_63VALVALTYRTYRFF388 - 469413 - 494

NCS oper:
IDCodeMatrixVector
1given(-0.494080322196, 0.869308207047, -0.0137068004383), (0.868852306862, 0.493130711514, -0.0437923534594), (-0.0313098080155, -0.0335461252875, -0.998946621897)175.815505037, -100.896001167, 57.9888926695
2given(0.482112918332, -0.867358434299, -0.123517126052), (-0.863381803838, -0.494307422538, 0.101153511185), (-0.148791783303, 0.0578750246188, -0.987173483612)12.4141408566, 10.2988902284, 72.5990557687
3given(-0.989268561047, -0.0015153904361, 0.146100710869), (-0.00705603760078, -0.998283977192, -0.0581318605846), (0.145938091183, -0.0585389141809, 0.987560260981)178.067872216, -86.0469275765, -15.3728503598
4given(-0.497071956772, 0.867585193633, 0.0146765656636), (-0.866949564166, -0.497273332486, 0.0334318110551), (0.0363032089847, 0.00389417353407, 0.999333233926)174.956239758, -101.975846616, -0.884301048623
5given(-0.990476794275, 0.00471991196289, 0.137598846045), (0.00996936487283, 0.99924741322, 0.0374862499864), (-0.137318359172, 0.0385010338182, -0.989778429058)178.756912475, -116.166957459, 72.734576283

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Components

#1: Protein
Serine hydroxymethyltransferase


Mass: 54951.082 Da / Num. of mol.: 6 / Mutation: A149T
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Glycine max (soybean) / Gene: SHMT / Production host: Escherichia coli (E. coli)
References: UniProt: K4FZF8, glycine hydroxymethyltransferase
#2: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 199 / Source method: isolated from a natural source / Formula: H2O
Has ligand of interestY
Has protein modificationY

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.48 Å3/Da / Density % sol: 50.33 %
Crystal growTemperature: 293 K / Method: vapor diffusion, sitting drop
Details: 0.1 M Ammonium tartrate dibasic pH 7.0 12% w/v Polyethylene glycol 3,350

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Data collection

DiffractionMean temperature: 100 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: ALS / Beamline: 4.2.2 / Wavelength: 1 Å
DetectorType: RDI CMOS_8M / Detector: CMOS / Date: May 24, 2025
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1 Å / Relative weight: 1
ReflectionResolution: 2.28→48.54 Å / Num. obs: 145304 / % possible obs: 99.8 % / Redundancy: 8.8 % / Biso Wilson estimate: 34.66 Å2 / CC1/2: 0.998 / Rmerge(I) obs: 0.182 / Rpim(I) all: 0.065 / Rrim(I) all: 0.194 / Net I/σ(I): 11.4
Reflection shellResolution: 2.28→2.32 Å / Redundancy: 9 % / Rmerge(I) obs: 1.792 / Mean I/σ(I) obs: 1.5 / Num. unique obs: 146610 / CC1/2: 0.599 / Rpim(I) all: 0.63 / Rrim(I) all: 1.902 / % possible all: 99.9

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Processing

Software
NameVersionClassification
PHENIX1.21.2_5419refinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT / Resolution: 2.28→48.54 Å / SU ML: 0.3958 / Cross valid method: FREE R-VALUE / σ(F): 1 / Phase error: 38.867
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflection
Rfree0.3128 7345 5.06 %
Rwork0.2721 137844 -
obs0.2742 145189 98.8 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.1 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 51.12 Å2
Refinement stepCycle: LAST / Resolution: 2.28→48.54 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms20015 0 0 199 20214
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.007920468
X-RAY DIFFRACTIONf_angle_d1.074727885
X-RAY DIFFRACTIONf_chiral_restr0.05773096
X-RAY DIFFRACTIONf_plane_restr0.00923675
X-RAY DIFFRACTIONf_dihedral_angle_d16.37656931
Refine LS restraints NCS
Ens-IDDom-IDAsym-IDAuth asym-IDRefine-IDTypeRms dev position (Å)
ens_1d_2AAX-RAY DIFFRACTIONTorsion NCS0.616922498101
ens_1d_3AAX-RAY DIFFRACTIONTorsion NCS0.506404433828
ens_1d_4AAX-RAY DIFFRACTIONTorsion NCS0.524576664674
ens_1d_5AAX-RAY DIFFRACTIONTorsion NCS0.480266407585
ens_1d_6AAX-RAY DIFFRACTIONTorsion NCS0.942987947522
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.28-2.310.45412640.40644617X-RAY DIFFRACTION99.9
2.31-2.330.44452200.39674614X-RAY DIFFRACTION99.86
2.33-2.360.41372550.38494593X-RAY DIFFRACTION99.94
2.36-2.390.40892450.37974649X-RAY DIFFRACTION99.9
2.39-2.420.40692810.37144551X-RAY DIFFRACTION99.94
2.42-2.460.3932340.36324644X-RAY DIFFRACTION99.86
2.46-2.490.38962590.35344567X-RAY DIFFRACTION99.77
2.49-2.530.41522370.3454580X-RAY DIFFRACTION99.22
2.53-2.570.35332360.34594536X-RAY DIFFRACTION98.41
2.57-2.610.36952200.32584600X-RAY DIFFRACTION99.12
2.61-2.650.37562500.31594586X-RAY DIFFRACTION99.77
2.65-2.70.33172470.30634611X-RAY DIFFRACTION99.77
2.7-2.760.31252070.30084660X-RAY DIFFRACTION99.71
2.76-2.810.3442410.29164638X-RAY DIFFRACTION99.69
2.81-2.870.36622800.30024560X-RAY DIFFRACTION99.53
2.87-2.940.36342460.29874610X-RAY DIFFRACTION99.69
2.94-3.010.3542380.28134615X-RAY DIFFRACTION99.51
3.01-3.090.34652450.29164614X-RAY DIFFRACTION99.35
3.09-3.190.35932330.28954620X-RAY DIFFRACTION99.32
3.19-3.290.33372690.28584599X-RAY DIFFRACTION99.06
3.29-3.410.34132290.29054545X-RAY DIFFRACTION98.29
3.41-3.540.35232590.28244557X-RAY DIFFRACTION98.17
3.54-3.70.32571970.25644559X-RAY DIFFRACTION97.04
3.7-3.90.28142480.23844505X-RAY DIFFRACTION96.55
3.9-4.140.25942450.22994515X-RAY DIFFRACTION96.63
4.14-4.460.25142350.21194497X-RAY DIFFRACTION96.22
4.46-4.910.23772490.21344462X-RAY DIFFRACTION95
4.91-5.620.23632290.22524640X-RAY DIFFRACTION97.61
5.62-7.080.27262670.23594664X-RAY DIFFRACTION98.66
7.08-48.540.24652800.21934836X-RAY DIFFRACTION98.69
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL11 (°2)L12 (°2)L13 (°2)L22 (°2)L23 (°2)L33 (°2)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T11 (Å2)T12 (Å2)T13 (Å2)T22 (Å2)T23 (Å2)T33 (Å2)Origin x (Å)Origin y (Å)Origin z (Å)
10.0747900443252-0.0270099951268-0.03421735566280.0788477164283-0.0898042644020.242696163242-0.0989711435191-0.0293286600673-0.245747614015-0.0591833112222-0.1471942930380.1490362840030.1819384191350.0394011457216-0.01694397698040.224057140216-0.0615048444946-0.0305957227170.285862272688-0.05652135290850.85878839714472.5734949521-78.270872357627.7853514464
20.007702751730840.00121468688909-0.003836795316940.0415606347853-0.07589409147870.2544089673810.0616647619968-0.04563484919820.3028529732360.048746943547-0.04471546729230.2199591191680.0923199946019-0.0861643891786-0.03081712367880.208055346056-0.0361409479059-0.0768364504890.237489806704-0.04939151641120.72554613560172.7787237723-48.072291310126.3301023301
30.0851098039826-0.0354710980787-0.1229648637940.03230229615590.02012846823460.208345578805-0.06344045950810.2240166668-0.0449595544096-0.115512244843-0.03888551384960.2306299039990.01576159877250.00826706296036-0.06692054723390.225771274728-0.0182672185085-0.1738582388980.2751718901830.008579587156260.63109597299769.1788718537-56.034355097318.5845354867
40.008645391236270.0268566738806-0.03075098204820.129037857153-0.1495660377140.1744303288510.04309275132690.1551612630090.05924477142120.1005246510150.07201768357050.168081143332-0.1013446279120.0172248752790.02870315761620.174550641191-0.0043647614687-0.05222615172440.248670341466-0.1278500618470.89541881889150.0864157367-54.938454881134.2326742228
50.0213355970369-0.0258629602373-0.01057649083350.02424436190170.01370714326070.02876649134270.06037724967640.005408786582-0.06147145711310.06890465189480.1093941225260.287830636699-0.229261297274-0.03412496164780.0009662792494120.26699705548-0.02076903654110.08450520408220.307824634012-0.1154921901710.69132970237553.8147515118-58.943130437846.205467561
60.01605033426080.0140518283836-0.01032205688780.00939055880858-0.003617375825270.0020840537651-0.034211851803-0.127928982013-0.002150549491780.0442243793161-0.07865452524990.0233248961273-0.01041629164570.03369805325849.25067424083E-50.345023422975-0.06066192706590.1212247949050.42994668355-0.1073695557680.78174076132452.4410546972-76.214713703342.4323052472
70.05057917160410.0255840789161-0.06234917576920.0381716966258-0.04747460458570.183422496735-0.0141049458528-0.0549012422353-0.1210281552610.0385397722209-0.07535747764350.3244621504390.04783075067870.104852205767-0.02094210701220.214226899739-0.0357402885016-0.01647487372140.249159880044-0.05321625513420.49216237326474.228362129-77.750596869832.0980691819
80.04138763353460.003394165920830.01433329744870.0328033363717-0.03156764976580.0371040054192-0.155957621252-0.0843305311744-0.05541608266090.0447465045127-0.0528525893484-0.115858280893-0.07436515299260.12150617541-0.348312211550.109245113655-0.0675788463312-0.2602508054020.258721212648-0.0719844328307-0.417791105231100.774432161-64.153664133231.7617656385
90.4589259794160.0610262867836-0.02004624181830.001333525193360.0111672353110.01925931485840.0267706349419-0.131685132333-0.3523928360030.00920327017712-0.0550412816337-0.0244388616953-0.0819079813136-0.02287123906270.009439305124840.219315174038-0.03075249753250.01415478255280.309158388857-0.01868233967540.094226772806689.7885183048-73.614364563838.4456687297
100.0222312316752-0.0129132803792-0.01969492753760.01748924615770.001096085382720.0132864484205-0.09759371458020.0385024535116-0.195331313770.04506929531080.04484117701740.120052559867-0.1458197892340.08524342761862.35465852327E-50.21351910683-0.0609883681999-0.02818122388570.246585790053-0.06588096374270.477672155515100.615571951-82.186344191417.5864154477
110.0945592041404-0.0215840911942-0.03141899635170.0219049918639-0.0106010663530.0170742621721-0.008271819724810.0295614993897-0.19007651156-0.06527649772640.03327180149330.1567445379310.00438516542710.07394519897780.007564505077960.314800577873-0.0571541042644-0.008860545786870.34372863833-0.264747891470.68703458506392.5070809941-91.176910613711.075637537
120.0154797420544-0.00901037217399-0.008420450134970.176788302719-0.08472129980570.132119636418-0.0142066213352-0.06725198893840.0340159070486-0.0801363253544-0.0989897087926-0.134906071031-0.06344949645440.0127016428702-0.09175384388970.365902866584-0.108499231925-0.07971919534840.292054088606-0.0231489549102-0.0857172588573111.610511745-10.784229069730.1099829913
130.03212387644290.00721629577832-0.01372295363480.083228959805-0.0070264073080.1333170298910.0330588638989-0.02479383963240.05243090361050.101620175807-0.08910216927110.4777033749920.0322023339840.0860921406833-0.001286474439360.238176186235-0.03516446168430.01825803981650.246943013061-0.05270189093560.47884248696988.2869176977-23.530200142837.5196338486
140.01329477982360.03841769728080.02187082434620.0832379016999-0.003555641802220.0159888588662-0.002273643290730.02494827475040.253522862542-0.0329928706766-0.07042543300230.047534705736-0.241016040144-0.1183947345710.006251817643170.29763730125-0.000209728675555-0.226051890317-0.0390469547769-0.03499459423390.84662249981687.4678281682-0.83005051017421.7419611746
150.0681455586828-0.0107422846828-0.0447073124380.0744126094654-0.007077165557780.01989886004730.07088602955980.02823446890190.178996421886-0.141423947124-0.04506339142920.0405757510573-0.1742258762920.08028079436937.87586384738E-50.269144534186-0.031734661423-0.05658309733650.2243035835860.02193531401650.356854575001110.768847066-10.055911754527.1596116362
160.01205636153330.0180916958350.01630545065340.09342398193010.06448800692260.060140838822-0.00584012967190.043844813007-0.0351099145112-0.1378268330010.0174752701731-0.1047114434150.03903501655290.0290334005753-0.01261502981570.363584412679-0.0823750223097-0.1223839123350.280895882404-0.0357201674035-0.11375746796113.603694403-34.584359683919.9766384396
170.0206911485632-0.0209058191830.01066407440420.0560602087393-0.005374921736130.0688716713013-0.00984858967166-0.1290496720470.185077931227-0.0180310278160.0619923710233-0.2648443030840.146118184790.09646726020261.9225147686E-50.259862054184-0.053990153674-0.1440898680910.268955720131-0.02131533723760.415781917911132.195891296-27.825895817239.4768547716
180.0136602634665-0.00280602917233-0.01435218032010.01876661872110.01108588902350.00169220224262-0.12581675544-0.02657472260760.269223487089-0.0173640746117-0.07375962616160.185083624423-0.0661727971069-0.10849688409-0.09810851308060.106167492261-0.00664383450496-0.08113346480260.229804433096-0.06939958432211.0067306145971.4275510156-124.76295055929.3423485173
190.1147350537650.06775634247070.05300417969240.1529656843920.004914762198360.0318726651188-0.1462203764590.0795968826401-0.0225263249687-0.07644386137230.0725268775193-0.17795120534-0.0008694019193240.0824913350373-0.03956582949550.238872040752-0.04705889169950.009649544190740.2834181044110.03399370014721.0322231604497.2410778958-136.49731146625.0426138598
200.0554896919907-0.0432418117193-0.05238363654670.07059822852820.02759063755040.0743282342838-0.1867836741410.03235797644770.233735254102-0.1577058059040.1081581431770.0190811301181-0.004101618359120.0454353399977-0.008245262766240.261596108644-0.0722605406534-0.02423530239150.2492126742440.009835790818610.83954043447889.2305466032-127.77663243621.086948504
210.04264135975840.0203133733091-0.06755747996830.0279459122356-0.005645168502190.129926541522-0.0403152805359-0.1893596501660.325350183795-0.0294805959918-0.04650545860710.163171741304-0.0825007950660.107962195673-0.08657302275450.104503278801-0.111882786936-0.05627574636170.197768587311-0.1846403668330.83422722595895.6698970949-115.65555610244.6478903164
220.03859346839030.00649517560567-0.008301180988760.03649209068230.01944098221680.0037895262045-0.05974016901490.034829788735-0.202416699229-0.03955104641790.0216693213295-0.1127364120230.1271452268510.00896543663277-0.0003567785158030.4905308508020.03085964939310.1632704821690.487129824570.1266608054211.81682113063111.64112165-192.60616292131.2340986441
230.0419748335166-0.0455368882784-0.01042321820430.0708265879334-0.01389934435520.0369258332656-0.0059093145398-0.104139291849-0.308879465992-0.0195930449526-0.0839197524316-0.2075535410510.0949710000580.0828783598271-0.07105744175670.2300304031580.2185491136260.02626984739180.1799771704920.3052069597861.81412134354111.100180443-165.70311939138.483516854
240.0221662726682-0.0107862388567-0.04140377268240.01404981741770.04267103212980.1609629166230.191906758208-0.0730848627405-0.1524809378040.04101043374210.121092212339-0.059889916055-0.08582050846750.1050901769650.009523979273550.4729050265780.004605733595170.09685066772230.4179174579270.06280902355211.76270464564129.039556537-174.08375430529.0983914181
250.0328779955625-0.0289488587619-0.00877943257150.01946126022580.00573491812544-0.002898380302910.00439292803299-0.0503097527921-0.2226200369750.05303070429740.0938645641938-0.084013923877-0.07639226124370.1248145478552.4305721966E-50.5714084006860.06017743369960.154653817830.71423530435-0.1716487236271.187240935133.736466773-181.19991964216.6699891974
Refinement TLS group

Refine-ID: X-RAY DIFFRACTION

IDRefine TLS-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11chain 'A' and (resid -1 through 89 )AA-1 - 891 - 91
22chain 'A' and (resid 90 through 180 )AA90 - 18092 - 182
33chain 'A' and (resid 181 through 308 )AA181 - 308183 - 305
44chain 'A' and (resid 309 through 356 )AA309 - 356306 - 353
55chain 'A' and (resid 357 through 440 )AA357 - 440354 - 433
66chain 'A' and (resid 441 through 469 )AA441 - 469434 - 462
77chain 'B' and (resid -1 through 105 )BB-1 - 1051 - 99
88chain 'B' and (resid 106 through 230 )BB106 - 230100 - 224
99chain 'B' and (resid 231 through 331 )BB231 - 331225 - 322
1010chain 'B' and (resid 332 through 401 )BB332 - 401323 - 390
1111chain 'B' and (resid 402 through 470 )BB402 - 470391 - 459
1212chain 'C' and (resid 0 through 89 )CC0 - 891 - 90
1313chain 'C' and (resid 90 through 292 )CC90 - 29291 - 289
1414chain 'C' and (resid 293 through 470 )CC293 - 470290 - 460
1515chain 'D' and (resid -1 through 89 )DD-1 - 891 - 91
1616chain 'D' and (resid 90 through 332 )DD90 - 33292 - 329
1717chain 'D' and (resid 333 through 470 )DD333 - 470330 - 463
1818chain 'E' and (resid -1 through 89 )EE-1 - 891 - 91
1919chain 'E' and (resid 90 through 257 )EE90 - 25792 - 259
2020chain 'E' and (resid 258 through 332 )EE258 - 332260 - 330
2121chain 'E' and (resid 333 through 470 )EE333 - 470331 - 461
2222chain 'F' and (resid 0 through 89 )FF0 - 891 - 87
2323chain 'F' and (resid 90 through 292 )FF90 - 29288 - 280
2424chain 'F' and (resid 293 through 401 )FF293 - 401281 - 381
2525chain 'F' and (resid 402 through 470 )FF402 - 470382 - 450

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