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- PDB-9cpj: Structures of small molecules bound to RNA repeat expansions that... -
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Basic information
Entry | Database: PDB / ID: 9cpj | ||||||||||||||||||||||||||||||||||
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Title | Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1 | ||||||||||||||||||||||||||||||||||
![]() | RNA (5'-R(*![]() RNA / CUG repeats / myotonic dystrophy type 1 / DM1 / 5'CUG/3'GUC | Function / homology | RNA / RNA (> 10) | ![]() Biological species | ![]() Method | SOLUTION NMR / simulated annealing | ![]() Chen, J.L. / Taghavi, A. / Disney, M.D. / Fountain, M.A. / Childs-Disney, J.L. | Funding support | | ![]()
![]() ![]() Title: Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1. Authors: Chen, J.L. / Taghavi, A. / Frank, A.J. / Fountain, M.A. / Choudhary, S. / Roy, S. / Childs-Disney, J.L. / Disney, M.D. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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PDBx/mmCIF format | ![]() | 325.5 KB | Display | ![]() |
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PDB format | ![]() | 272.8 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
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-Validation report
Summary document | ![]() | 424.8 KB | Display | ![]() |
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Full document | ![]() | 802.5 KB | Display | |
Data in XML | ![]() | 33.8 KB | Display | |
Data in CIF | ![]() | 47.1 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 9cpdC ![]() 9cpgC ![]() 9cpiC C: citing same article ( |
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Similar structure data | Similarity search - Function & homology ![]() |
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: RNA chain | Mass: 4133.501 Da / Num. of mol.: 2 / Source method: obtained synthetically / Source: (synth.) ![]() |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
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Sample |
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Sample conditions |
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-NMR measurement
NMR spectrometer |
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Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 2 | ||||||||||||||||
NMR representative | Selection criteria: fewest violations | ||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the least restraint violations Conformers calculated total number: 100 / Conformers submitted total number: 20 |