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- PDB-8qo0: Asymmetric structure of the Borrelia bacteriophage BB1 procapsid,... -

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Basic information

Entry
Database: PDB / ID: 8qo0
TitleAsymmetric structure of the Borrelia bacteriophage BB1 procapsid, 3D class 2
Components
  • (Decoration protein ...) x 2
  • Cytosolic proteinCytosol
  • DUF228 domain-containing protein
  • Putative phage portal protein
  • Scaffold protein
KeywordsVIRAL PROTEIN / Portal / capsid / procapsid / scaffold
Function / homology
Function and homology information


Protein of unknown function DUF228 / Lyme disease proteins of unknown function / Uncharacterised conserved protein UCP020357 / Protein of unknown function DUF1073 / Anti-CBASS protein Acb1-like / Protein of unknown function DUF1357 / Protein of unknown function (DUF1357)
Similarity search - Domain/homology
DUF228 domain-containing protein / Uncharacterized protein / Uncharacterized protein / Uncharacterized protein / Phage portal protein / Cytosolic protein
Similarity search - Component
Biological speciesBorreliella burgdorferi B31 (bacteria)
MethodELECTRON MICROSCOPY / single particle reconstruction / cryo EM / Resolution: 10.62 Å
AuthorsRumnieks, J. / Fuzik, T. / Tars, K.
Funding supportEuropean Union, 3items
OrganizationGrant numberCountry
European Regional Development Fund1.1.1.2/VIAA/4/20/704European Union
iNEXT-Discovery18826European Union
iNEXT-Discovery24421European Union
CitationJournal: J Mol Biol / Year: 2023
Title: Structure of the Borrelia Bacteriophage φBB1 Procapsid.
Authors: Jānis Rūmnieks / Tibor Füzik / Kaspars Tārs /
Abstract: Bacteriophages of Borrelia burgdorferi are a biologically important but under-investigated feature of the Lyme disease-causing spirochete. No virulent borrelial viruses have been identified, but all ...Bacteriophages of Borrelia burgdorferi are a biologically important but under-investigated feature of the Lyme disease-causing spirochete. No virulent borrelial viruses have been identified, but all B. burgdorferi isolates carry a prophage φBB1 as resident circular plasmids. Like its host, the φBB1 phage is quite distinctive and shares little sequence similarity with other known bacteriophages. We expressed φBB1 head morphogenesis proteins in Escherichia coli which resulted in assembly of homogeneous prolate procapsid structures and used cryo-electron microscopy to determine the three-dimensional structure of these particles. The φBB1 procapsids consist of 415 copies of the major capsid protein and an equal combined number of three homologous capsid decoration proteins that form trimeric knobs on the outside of the particle. One of the end vertices of the particle is occupied by a portal assembled from twelve copies of the portal protein. The φBB1 scaffolding protein is entirely α-helical and has an elongated shape with a small globular domain in the middle. Within the tubular section of the procapsid, the internal scaffold is built of stacked rings, each composed of 32 scaffolding protein molecules, which run in opposite directions from both caps with a heterogeneous part in the middle. Inside the portal-containing cap, the scaffold is organized asymmetrically with ten scaffolding protein molecules bound to the portal. The φBB1 procapsid structure provides better insight into the vast structural diversity of bacteriophages and presents clues of how elongated bacteriophage particles might be assembled.
History
DepositionSep 27, 2023Processing site: PDBE
Revision 1.0Dec 27, 2023Provider: repository / Type: Initial release

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
AA: Cytosolic protein
AB: Cytosolic protein
AC: Cytosolic protein
AD: Cytosolic protein
AE: Cytosolic protein
AF: Cytosolic protein
AG: Cytosolic protein
AH: Cytosolic protein
AI: Cytosolic protein
AJ: Cytosolic protein
AK: Cytosolic protein
AL: Cytosolic protein
AM: Cytosolic protein
AN: Cytosolic protein
AO: Cytosolic protein
AP: Cytosolic protein
AQ: Cytosolic protein
AR: Cytosolic protein
AS: Cytosolic protein
AT: Cytosolic protein
AU: Cytosolic protein
AV: Cytosolic protein
AW: Cytosolic protein
AX: Cytosolic protein
AY: Cytosolic protein
AZ: Cytosolic protein
Aa: Cytosolic protein
Ab: Cytosolic protein
Ac: Cytosolic protein
Ad: Cytosolic protein
Ae: Cytosolic protein
Af: Cytosolic protein
Ag: Cytosolic protein
Ah: Cytosolic protein
Ai: Cytosolic protein
Aj: Cytosolic protein
Ak: Cytosolic protein
Al: Cytosolic protein
Am: Cytosolic protein
An: Cytosolic protein
Ao: Cytosolic protein
Ap: Cytosolic protein
Aq: Cytosolic protein
Ar: Cytosolic protein
As: Cytosolic protein
At: Cytosolic protein
Au: Cytosolic protein
Av: Cytosolic protein
Aw: Cytosolic protein
Ax: Cytosolic protein
Ay: Cytosolic protein
Az: Cytosolic protein
BA: Cytosolic protein
BB: Cytosolic protein
BC: Cytosolic protein
BD: Cytosolic protein
BE: Cytosolic protein
BF: Cytosolic protein
BG: Cytosolic protein
BH: Cytosolic protein
BI: Cytosolic protein
BJ: Cytosolic protein
BK: Cytosolic protein
BL: Cytosolic protein
BM: Cytosolic protein
BN: Cytosolic protein
BO: Cytosolic protein
BP: Cytosolic protein
BQ: Cytosolic protein
BR: Cytosolic protein
BS: Cytosolic protein
BT: Cytosolic protein
BU: Cytosolic protein
BV: Cytosolic protein
BW: Cytosolic protein
BX: Cytosolic protein
BY: Cytosolic protein
BZ: Cytosolic protein
Ba: Cytosolic protein
Bb: Cytosolic protein
Bc: Cytosolic protein
Bd: Cytosolic protein
Be: Cytosolic protein
Bf: Decoration protein P03
Bg: Decoration protein P03
Bh: Decoration protein P03
Bi: Decoration protein P03
Bj: Decoration protein P03
Bk: Decoration protein P03
Bl: Decoration protein P03
Bm: Decoration protein P03
Bn: Decoration protein P03
Bo: Decoration protein P03
Bp: Decoration protein P03
Bq: Decoration protein P03
Br: Decoration protein P03
Bs: Decoration protein P03
Bt: Decoration protein P03
Bu: Decoration protein P03
Bv: Decoration protein P03
Bw: Decoration protein P03
Bx: Decoration protein P03
By: Decoration protein P03
Bz: Decoration protein P03
CA: Decoration protein P03
CB: Decoration protein P03
CC: Decoration protein P03
CD: Decoration protein P03
CE: Decoration protein P03
CF: Decoration protein P03
CG: Decoration protein P03
CH: Decoration protein P03
CI: Decoration protein P03
CJ: Decoration protein P03
CK: Decoration protein P03
CL: Decoration protein P03
CM: Decoration protein P03
CN: Decoration protein P03
CO: Decoration protein P03
CP: Decoration protein P03
CQ: Decoration protein P03
CR: Decoration protein P03
CS: Decoration protein P03
CT: Decoration protein P03
CU: Decoration protein P03
CV: Decoration protein P03
CW: Decoration protein P03
CX: Decoration protein P03
CY: Decoration protein P03
CZ: Decoration protein P03
Ca: Decoration protein P03
Cb: Decoration protein P03
Cc: Decoration protein P03
Cd: Decoration protein P03
Ce: Decoration protein P03
Cf: Decoration protein P03
Cg: Decoration protein P03
Ch: Decoration protein P03
Ci: Decoration protein P03
Cj: Decoration protein P04
Ck: DUF228 domain-containing protein
Cl: DUF228 domain-containing protein
Cm: DUF228 domain-containing protein
Cn: DUF228 domain-containing protein
Co: DUF228 domain-containing protein
Cp: DUF228 domain-containing protein
Cq: DUF228 domain-containing protein
Cr: DUF228 domain-containing protein
Cs: DUF228 domain-containing protein
Ct: DUF228 domain-containing protein
Cu: DUF228 domain-containing protein
Cv: DUF228 domain-containing protein
Cw: DUF228 domain-containing protein
Cx: DUF228 domain-containing protein
Cy: DUF228 domain-containing protein
Cz: DUF228 domain-containing protein
DA: DUF228 domain-containing protein
DB: DUF228 domain-containing protein
DC: DUF228 domain-containing protein
DD: DUF228 domain-containing protein
DE: DUF228 domain-containing protein
DF: DUF228 domain-containing protein
DG: DUF228 domain-containing protein
DH: DUF228 domain-containing protein
DI: DUF228 domain-containing protein
DJ: DUF228 domain-containing protein
DK: Scaffold protein
DL: Scaffold protein
DM: Scaffold protein
DN: Scaffold protein
DO: Scaffold protein
DP: Scaffold protein
DQ: Scaffold protein
DR: Scaffold protein
DS: Scaffold protein
DT: Scaffold protein
DU: Scaffold protein
DV: Scaffold protein
DW: Scaffold protein
DX: Scaffold protein
DY: Scaffold protein
DZ: Scaffold protein
Da: Scaffold protein
Db: Scaffold protein
Dc: Scaffold protein
Dd: Scaffold protein
De: Scaffold protein
Df: Scaffold protein
Dg: Scaffold protein
Dh: Scaffold protein
Di: Scaffold protein
Dj: Scaffold protein
Dk: Scaffold protein
Dl: Scaffold protein
Dm: Scaffold protein
Dn: Scaffold protein
Do: Scaffold protein
Dp: Scaffold protein
Dq: Scaffold protein
Dr: Scaffold protein
Ds: Scaffold protein
Dt: Scaffold protein
Du: Scaffold protein
Dv: Scaffold protein
Dw: Scaffold protein
Dx: Scaffold protein
Dy: Scaffold protein
Dz: Scaffold protein
EA: Scaffold protein
EB: Scaffold protein
EC: Scaffold protein
ED: Scaffold protein
EE: Scaffold protein
EF: Scaffold protein
EG: Scaffold protein
EH: Scaffold protein
EI: Scaffold protein
EJ: Scaffold protein
EK: Scaffold protein
EL: Scaffold protein
EM: Scaffold protein
EN: Scaffold protein
EO: Scaffold protein
EP: Scaffold protein
EQ: Scaffold protein
ER: Scaffold protein
ES: Scaffold protein
ET: Scaffold protein
EU: Scaffold protein
EV: Scaffold protein
EW: Scaffold protein
EX: Scaffold protein
EY: Scaffold protein
EZ: Scaffold protein
Ea: Scaffold protein
Eb: Scaffold protein
Ec: Scaffold protein
Ed: Scaffold protein
Ee: Scaffold protein
Ef: Scaffold protein
Eg: Scaffold protein
Eh: Scaffold protein
Ei: Scaffold protein
Ej: Scaffold protein
Ek: Scaffold protein
El: Scaffold protein
Em: Scaffold protein
En: Scaffold protein
Eo: Scaffold protein
Ep: Cytosolic protein
Eq: Cytosolic protein
Er: Cytosolic protein
Es: Cytosolic protein
Et: Cytosolic protein
Eu: Cytosolic protein
Ev: Cytosolic protein
Ew: Cytosolic protein
Ex: Cytosolic protein
Ey: Cytosolic protein
Ez: Cytosolic protein
FA: Cytosolic protein
FB: Cytosolic protein
FC: Cytosolic protein
FD: Cytosolic protein
FE: Cytosolic protein
FF: Cytosolic protein
FG: Cytosolic protein
FH: Cytosolic protein
FI: Cytosolic protein
FJ: Cytosolic protein
FK: Cytosolic protein
FL: Cytosolic protein
FM: Cytosolic protein
FN: Cytosolic protein
FO: Cytosolic protein
FP: Cytosolic protein
FQ: Cytosolic protein
FR: Cytosolic protein
FS: Cytosolic protein
FT: Cytosolic protein
FU: Cytosolic protein
FV: Cytosolic protein
FW: Cytosolic protein
FX: Cytosolic protein
FY: Cytosolic protein
FZ: Cytosolic protein
Fa: Cytosolic protein
Fb: Cytosolic protein
Fc: Cytosolic protein
Fd: Cytosolic protein
Fe: Cytosolic protein
Ff: Cytosolic protein
Fg: Cytosolic protein
Fh: Cytosolic protein
Fi: Cytosolic protein
Fj: Cytosolic protein
Fk: Cytosolic protein
Fl: Cytosolic protein
Fm: Cytosolic protein
Fn: Cytosolic protein
Fo: Cytosolic protein
Fp: Cytosolic protein
Fq: Cytosolic protein
Fr: Cytosolic protein
Fs: Cytosolic protein
Ft: Cytosolic protein
Fu: Cytosolic protein
Fv: Cytosolic protein
Fw: Cytosolic protein
Fx: Cytosolic protein
Fy: Cytosolic protein
Fz: Cytosolic protein
GA: Cytosolic protein
GB: Cytosolic protein
GC: Cytosolic protein
GD: Cytosolic protein
GE: Cytosolic protein
GF: Cytosolic protein
GG: Cytosolic protein
GH: Cytosolic protein
GI: Cytosolic protein
GJ: Cytosolic protein
GK: Cytosolic protein
GL: Cytosolic protein
GM: Cytosolic protein
GN: Cytosolic protein
GO: Cytosolic protein
GP: Cytosolic protein
GQ: Cytosolic protein
GR: Cytosolic protein
GS: Cytosolic protein
GT: Cytosolic protein
GU: Decoration protein P03
GV: Decoration protein P03
GW: Decoration protein P03
GX: Decoration protein P03
GY: Decoration protein P03
GZ: Decoration protein P03
Ga: Decoration protein P03
Gb: Decoration protein P03
Gc: Decoration protein P03
Gd: Decoration protein P03
Ge: Decoration protein P03
Gf: Decoration protein P03
Gg: Decoration protein P03
Gh: Decoration protein P03
Gi: Decoration protein P03
Gj: Decoration protein P03
Gk: Decoration protein P03
Gl: Decoration protein P03
Gm: Decoration protein P03
Gn: Decoration protein P03
Go: Decoration protein P03
Gp: Decoration protein P03
Gq: Decoration protein P03
Gr: Decoration protein P03
Gs: Decoration protein P03
Gt: Decoration protein P03
Gu: Decoration protein P03
Gv: Decoration protein P03
Gw: Decoration protein P03
Gx: Decoration protein P03
Gy: Decoration protein P03
Gz: Decoration protein P03
HA: Decoration protein P03
HB: Decoration protein P03
HC: Decoration protein P03
HD: Decoration protein P03
HE: Decoration protein P03
HF: Decoration protein P03
HG: Decoration protein P03
HH: Decoration protein P03
HI: Decoration protein P03
HJ: Decoration protein P03
HK: Decoration protein P03
HL: Decoration protein P03
HM: Decoration protein P03
HN: Decoration protein P03
HO: Decoration protein P03
HP: Decoration protein P03
HQ: Decoration protein P03
HR: Decoration protein P03
HS: Decoration protein P03
HT: Decoration protein P03
HU: Decoration protein P03
HV: Decoration protein P03
HW: Decoration protein P03
HX: Decoration protein P03
HY: Decoration protein P04
HZ: DUF228 domain-containing protein
Ha: DUF228 domain-containing protein
Hb: DUF228 domain-containing protein
Hc: DUF228 domain-containing protein
Hd: DUF228 domain-containing protein
He: DUF228 domain-containing protein
Hf: DUF228 domain-containing protein
Hg: DUF228 domain-containing protein
Hh: DUF228 domain-containing protein
Hi: DUF228 domain-containing protein
Hj: DUF228 domain-containing protein
Hk: DUF228 domain-containing protein
Hl: DUF228 domain-containing protein
Hm: DUF228 domain-containing protein
Hn: DUF228 domain-containing protein
Ho: DUF228 domain-containing protein
Hp: DUF228 domain-containing protein
Hq: DUF228 domain-containing protein
Hr: DUF228 domain-containing protein
Hs: DUF228 domain-containing protein
Ht: DUF228 domain-containing protein
Hu: DUF228 domain-containing protein
Hv: DUF228 domain-containing protein
Hw: DUF228 domain-containing protein
Hx: DUF228 domain-containing protein
Hy: DUF228 domain-containing protein
Hz: Scaffold protein
IA: Scaffold protein
IB: Scaffold protein
IC: Scaffold protein
ID: Scaffold protein
IE: Scaffold protein
IF: Scaffold protein
IG: Scaffold protein
IH: Scaffold protein
II: Scaffold protein
IJ: Scaffold protein
IK: Scaffold protein
IL: Scaffold protein
IM: Scaffold protein
IN: Scaffold protein
IO: Scaffold protein
IP: Scaffold protein
IQ: Scaffold protein
IR: Scaffold protein
IS: Scaffold protein
IT: Scaffold protein
IU: Scaffold protein
IV: Scaffold protein
IW: Scaffold protein
IX: Scaffold protein
IY: Scaffold protein
IZ: Scaffold protein
Ia: Scaffold protein
Ib: Scaffold protein
Ic: Scaffold protein
Id: Scaffold protein
Ie: Scaffold protein
If: Scaffold protein
Ig: Scaffold protein
Ih: Scaffold protein
Ii: Scaffold protein
Ij: Scaffold protein
Ik: Scaffold protein
Il: Scaffold protein
Im: Scaffold protein
In: Scaffold protein
Io: Scaffold protein
Ip: Scaffold protein
Iq: Scaffold protein
Ir: Scaffold protein
Is: Scaffold protein
It: Scaffold protein
Iu: Scaffold protein
Iv: Scaffold protein
Iw: Scaffold protein
Ix: Scaffold protein
Iy: Scaffold protein
Iz: Scaffold protein
JA: Scaffold protein
JB: Scaffold protein
JC: Scaffold protein
JD: Scaffold protein
JE: Scaffold protein
JF: Scaffold protein
JG: Scaffold protein
JH: Scaffold protein
JI: Scaffold protein
JJ: Scaffold protein
JK: Scaffold protein
JL: Scaffold protein
JM: Scaffold protein
JN: Scaffold protein
JO: Scaffold protein
JP: Scaffold protein
JQ: Scaffold protein
JR: Scaffold protein
JS: Scaffold protein
JT: Scaffold protein
JU: Scaffold protein
JV: Scaffold protein
JW: Scaffold protein
JX: Scaffold protein
JY: Scaffold protein
JZ: Scaffold protein
Ja: Scaffold protein
Jb: Scaffold protein
Jc: Scaffold protein
Jd: Scaffold protein
Je: Cytosolic protein
Jf: Cytosolic protein
Jg: Cytosolic protein
Jh: Cytosolic protein
Ji: Cytosolic protein
Jj: Cytosolic protein
Jk: Cytosolic protein
Jl: Cytosolic protein
Jm: Cytosolic protein
Jn: Cytosolic protein
Jo: Cytosolic protein
Jp: Cytosolic protein
Jq: Cytosolic protein
Jr: Cytosolic protein
Js: Cytosolic protein
Jt: Cytosolic protein
Ju: Cytosolic protein
Jv: Cytosolic protein
Jw: Cytosolic protein
Jx: Cytosolic protein
Jy: Cytosolic protein
Jz: Cytosolic protein
KA: Cytosolic protein
KB: Cytosolic protein
KC: Cytosolic protein
KD: Cytosolic protein
KE: Cytosolic protein
KF: Cytosolic protein
KG: Cytosolic protein
KH: Cytosolic protein
KI: Cytosolic protein
KJ: Cytosolic protein
KK: Cytosolic protein
KL: Cytosolic protein
KM: Cytosolic protein
KN: Cytosolic protein
KO: Cytosolic protein
KP: Cytosolic protein
KQ: Cytosolic protein
KR: Cytosolic protein
KS: Cytosolic protein
KT: Cytosolic protein
KU: Cytosolic protein
KV: Cytosolic protein
KW: Cytosolic protein
KX: Cytosolic protein
KY: Cytosolic protein
KZ: Cytosolic protein
Ka: Cytosolic protein
Kb: Cytosolic protein
Kc: Cytosolic protein
Kd: Cytosolic protein
Ke: Cytosolic protein
Kf: Cytosolic protein
Kg: Cytosolic protein
Kh: Cytosolic protein
Ki: Cytosolic protein
Kj: Cytosolic protein
Kk: Cytosolic protein
Kl: Cytosolic protein
Km: Cytosolic protein
Kn: Cytosolic protein
Ko: Cytosolic protein
Kp: Cytosolic protein
Kq: Cytosolic protein
Kr: Cytosolic protein
Ks: Cytosolic protein
Kt: Cytosolic protein
Ku: Cytosolic protein
Kv: Cytosolic protein
Kw: Cytosolic protein
Kx: Cytosolic protein
Ky: Cytosolic protein
Kz: Cytosolic protein
LA: Cytosolic protein
LB: Cytosolic protein
LC: Cytosolic protein
LD: Cytosolic protein
LE: Cytosolic protein
LF: Cytosolic protein
LG: Cytosolic protein
LH: Cytosolic protein
LI: Cytosolic protein
LJ: Decoration protein P03
LK: Decoration protein P03
LL: Decoration protein P03
LM: Decoration protein P03
LN: Decoration protein P03
LO: Decoration protein P03
LP: Decoration protein P03
LQ: Decoration protein P03
LR: Decoration protein P03
LS: Decoration protein P03
LT: Decoration protein P03
LU: Decoration protein P03
LV: Decoration protein P03
LW: Decoration protein P03
LX: Decoration protein P03
LY: Decoration protein P03
LZ: Decoration protein P03
La: Decoration protein P03
Lb: Decoration protein P03
Lc: Decoration protein P03
Ld: Decoration protein P03
Le: Decoration protein P03
Lf: Decoration protein P03
Lg: Decoration protein P03
Lh: Decoration protein P03
Li: Decoration protein P03
Lj: Decoration protein P03
Lk: Decoration protein P03
Ll: Decoration protein P03
Lm: Decoration protein P03
Ln: Decoration protein P03
Lo: Decoration protein P03
Lp: Decoration protein P03
Lq: Decoration protein P03
Lr: Decoration protein P03
Ls: Decoration protein P03
Lt: Decoration protein P03
Lu: Decoration protein P03
Lv: Decoration protein P03
Lw: Decoration protein P03
Lx: Decoration protein P03
Ly: Decoration protein P03
Lz: Decoration protein P03
MA: Decoration protein P03
MB: Decoration protein P03
MC: Decoration protein P03
MD: Decoration protein P03
ME: Decoration protein P03
MF: Decoration protein P03
MG: Decoration protein P03
MH: Decoration protein P03
MI: Decoration protein P03
MJ: Decoration protein P03
MK: Decoration protein P03
ML: Decoration protein P03
MM: Decoration protein P03
MN: Decoration protein P04
MO: DUF228 domain-containing protein
MP: DUF228 domain-containing protein
MQ: DUF228 domain-containing protein
MR: DUF228 domain-containing protein
MS: DUF228 domain-containing protein
MT: DUF228 domain-containing protein
MU: DUF228 domain-containing protein
MV: DUF228 domain-containing protein
MW: DUF228 domain-containing protein
MX: DUF228 domain-containing protein
MY: DUF228 domain-containing protein
MZ: DUF228 domain-containing protein
Ma: DUF228 domain-containing protein
Mb: DUF228 domain-containing protein
Mc: DUF228 domain-containing protein
Md: DUF228 domain-containing protein
Me: DUF228 domain-containing protein
Mf: DUF228 domain-containing protein
Mg: DUF228 domain-containing protein
Mh: DUF228 domain-containing protein
Mi: DUF228 domain-containing protein
Mj: DUF228 domain-containing protein
Mk: DUF228 domain-containing protein
Ml: DUF228 domain-containing protein
Mm: DUF228 domain-containing protein
Mn: DUF228 domain-containing protein
Mo: Scaffold protein
Mp: Scaffold protein
Mq: Scaffold protein
Mr: Scaffold protein
Ms: Scaffold protein
Mt: Scaffold protein
Mu: Scaffold protein
Mv: Scaffold protein
Mw: Scaffold protein
Mx: Scaffold protein
My: Scaffold protein
Mz: Scaffold protein
NA: Scaffold protein
NB: Scaffold protein
NC: Scaffold protein
ND: Scaffold protein
NE: Scaffold protein
NF: Scaffold protein
NG: Scaffold protein
NH: Scaffold protein
NI: Scaffold protein
NJ: Scaffold protein
NK: Scaffold protein
NL: Scaffold protein
NM: Scaffold protein
NN: Scaffold protein
NO: Scaffold protein
NP: Scaffold protein
NQ: Scaffold protein
NR: Scaffold protein
NS: Scaffold protein
NT: Scaffold protein
NU: Scaffold protein
NV: Scaffold protein
NW: Scaffold protein
NX: Scaffold protein
NY: Scaffold protein
NZ: Scaffold protein
Na: Scaffold protein
Nb: Scaffold protein
Nc: Scaffold protein
Nd: Scaffold protein
Ne: Scaffold protein
Nf: Scaffold protein
Ng: Scaffold protein
Nh: Scaffold protein
Ni: Scaffold protein
Nj: Scaffold protein
Nk: Scaffold protein
Nl: Scaffold protein
Nm: Scaffold protein
Nn: Scaffold protein
No: Scaffold protein
Np: Scaffold protein
Nq: Scaffold protein
Nr: Scaffold protein
Ns: Scaffold protein
Nt: Scaffold protein
Nu: Scaffold protein
Nv: Scaffold protein
Nw: Scaffold protein
Nx: Scaffold protein
Ny: Scaffold protein
Nz: Scaffold protein
OA: Scaffold protein
OB: Scaffold protein
OC: Scaffold protein
OD: Scaffold protein
OE: Scaffold protein
OF: Scaffold protein
OG: Scaffold protein
OH: Scaffold protein
OI: Scaffold protein
OJ: Scaffold protein
OK: Scaffold protein
OL: Scaffold protein
OM: Scaffold protein
ON: Scaffold protein
OO: Scaffold protein
OP: Scaffold protein
OQ: Scaffold protein
OR: Scaffold protein
OS: Scaffold protein
OT: Cytosolic protein
OU: Cytosolic protein
OV: Cytosolic protein
OW: Cytosolic protein
OX: Cytosolic protein
OY: Cytosolic protein
OZ: Cytosolic protein
Oa: Cytosolic protein
Ob: Cytosolic protein
Oc: Cytosolic protein
Od: Cytosolic protein
Oe: Cytosolic protein
Of: Cytosolic protein
Og: Cytosolic protein
Oh: Cytosolic protein
Oi: Cytosolic protein
Oj: Cytosolic protein
Ok: Cytosolic protein
Ol: Cytosolic protein
Om: Cytosolic protein
On: Cytosolic protein
Oo: Cytosolic protein
Op: Cytosolic protein
Oq: Cytosolic protein
Or: Cytosolic protein
Os: Cytosolic protein
Ot: Cytosolic protein
Ou: Cytosolic protein
Ov: Cytosolic protein
Ow: Cytosolic protein
Ox: Cytosolic protein
Oy: Cytosolic protein
Oz: Cytosolic protein
PA: Cytosolic protein
PB: Cytosolic protein
PC: Cytosolic protein
PD: Cytosolic protein
PE: Cytosolic protein
PF: Cytosolic protein
PG: Cytosolic protein
PH: Cytosolic protein
PI: Cytosolic protein
PJ: Cytosolic protein
PK: Cytosolic protein
PL: Cytosolic protein
PM: Cytosolic protein
PN: Cytosolic protein
PO: Cytosolic protein
PP: Cytosolic protein
PQ: Cytosolic protein
PR: Cytosolic protein
PS: Cytosolic protein
PT: Cytosolic protein
PU: Cytosolic protein
PV: Cytosolic protein
PW: Cytosolic protein
PX: Cytosolic protein
PY: Cytosolic protein
PZ: Cytosolic protein
Pa: Cytosolic protein
Pb: Cytosolic protein
Pc: Cytosolic protein
Pd: Cytosolic protein
Pe: Cytosolic protein
Pf: Cytosolic protein
Pg: Cytosolic protein
Ph: Cytosolic protein
Pi: Cytosolic protein
Pj: Cytosolic protein
Pk: Cytosolic protein
Pl: Cytosolic protein
Pm: Cytosolic protein
Pn: Cytosolic protein
Po: Cytosolic protein
Pp: Cytosolic protein
Pq: Cytosolic protein
Pr: Cytosolic protein
Ps: Cytosolic protein
Pt: Cytosolic protein
Pu: Cytosolic protein
Pv: Cytosolic protein
Pw: Cytosolic protein
Px: Cytosolic protein
Py: Decoration protein P03
Pz: Decoration protein P03
QA: Decoration protein P03
QB: Decoration protein P03
QC: Decoration protein P03
QD: Decoration protein P03
QE: Decoration protein P03
QF: Decoration protein P03
QG: Decoration protein P03
QH: Decoration protein P03
QI: Decoration protein P03
QJ: Decoration protein P03
QK: Decoration protein P03
QL: Decoration protein P03
QM: Decoration protein P03
QN: Decoration protein P03
QO: Decoration protein P03
QP: Decoration protein P03
QQ: Decoration protein P03
QR: Decoration protein P03
QS: Decoration protein P03
QT: Decoration protein P03
QU: Decoration protein P03
QV: Decoration protein P03
QW: Decoration protein P03
QX: Decoration protein P03
QY: Decoration protein P03
QZ: Decoration protein P03
Qa: Decoration protein P03
Qb: Decoration protein P03
Qc: Decoration protein P03
Qd: Decoration protein P03
Qe: Decoration protein P03
Qf: Decoration protein P03
Qg: Decoration protein P03
Qh: Decoration protein P03
Qi: Decoration protein P03
Qj: Decoration protein P03
Qk: Decoration protein P03
Ql: Decoration protein P03
Qm: Decoration protein P03
Qn: Decoration protein P03
Qo: Decoration protein P03
Qp: Decoration protein P03
Qq: Decoration protein P03
Qr: Decoration protein P03
Qs: Decoration protein P03
Qt: Decoration protein P03
Qu: Decoration protein P03
Qv: Decoration protein P03
Qw: Decoration protein P03
Qx: Decoration protein P03
Qy: Decoration protein P03
Qz: Decoration protein P03
RA: Decoration protein P03
RB: Decoration protein P03
RC: Decoration protein P04
RD: DUF228 domain-containing protein
RE: DUF228 domain-containing protein
RF: DUF228 domain-containing protein
RG: DUF228 domain-containing protein
RH: DUF228 domain-containing protein
RI: DUF228 domain-containing protein
RJ: DUF228 domain-containing protein
RK: DUF228 domain-containing protein
RL: DUF228 domain-containing protein
RM: DUF228 domain-containing protein
RN: DUF228 domain-containing protein
RO: DUF228 domain-containing protein
RP: DUF228 domain-containing protein
RQ: DUF228 domain-containing protein
RR: DUF228 domain-containing protein
RS: DUF228 domain-containing protein
RT: DUF228 domain-containing protein
RU: DUF228 domain-containing protein
RV: DUF228 domain-containing protein
RW: DUF228 domain-containing protein
RX: DUF228 domain-containing protein
RY: DUF228 domain-containing protein
RZ: DUF228 domain-containing protein
Ra: DUF228 domain-containing protein
Rb: DUF228 domain-containing protein
Rc: DUF228 domain-containing protein
Rd: Scaffold protein
Re: Scaffold protein
Rf: Scaffold protein
Rg: Scaffold protein
Rh: Scaffold protein
Ri: Scaffold protein
Rj: Scaffold protein
Rk: Scaffold protein
Rl: Scaffold protein
Rm: Scaffold protein
Rn: Scaffold protein
Ro: Scaffold protein
Rp: Scaffold protein
Rq: Scaffold protein
Rr: Scaffold protein
Rs: Scaffold protein
Rt: Scaffold protein
Ru: Scaffold protein
Rv: Scaffold protein
Rw: Scaffold protein
Rx: Scaffold protein
Ry: Scaffold protein
Rz: Scaffold protein
SA: Scaffold protein
SB: Scaffold protein
SC: Scaffold protein
SD: Scaffold protein
SE: Scaffold protein
SF: Scaffold protein
SG: Scaffold protein
SH: Scaffold protein
SI: Scaffold protein
SJ: Scaffold protein
SK: Scaffold protein
SL: Scaffold protein
SM: Scaffold protein
SN: Scaffold protein
SO: Scaffold protein
SP: Scaffold protein
SQ: Scaffold protein
SR: Scaffold protein
SS: Scaffold protein
ST: Scaffold protein
SU: Scaffold protein
SV: Scaffold protein
SW: Scaffold protein
SX: Scaffold protein
SY: Scaffold protein
SZ: Scaffold protein
Sa: Scaffold protein
Sb: Scaffold protein
Sc: Scaffold protein
Sd: Scaffold protein
Se: Scaffold protein
Sf: Scaffold protein
Sg: Scaffold protein
Sh: Scaffold protein
Si: Scaffold protein
Sj: Scaffold protein
Sk: Scaffold protein
Sl: Scaffold protein
Sm: Scaffold protein
Sn: Scaffold protein
So: Scaffold protein
Sp: Scaffold protein
Sq: Scaffold protein
Sr: Scaffold protein
Ss: Scaffold protein
St: Scaffold protein
Su: Scaffold protein
Sv: Scaffold protein
Sw: Scaffold protein
Sx: Scaffold protein
Sy: Scaffold protein
Sz: Scaffold protein
TA: Scaffold protein
TB: Scaffold protein
TC: Scaffold protein
TD: Scaffold protein
TE: Scaffold protein
TF: Scaffold protein
TG: Scaffold protein
TH: Scaffold protein
TI: Cytosolic protein
TJ: Cytosolic protein
TK: Cytosolic protein
TL: Cytosolic protein
TM: Cytosolic protein
TN: Cytosolic protein
TO: Cytosolic protein
TP: Cytosolic protein
TQ: Cytosolic protein
TR: Cytosolic protein
TS: Cytosolic protein
TT: Cytosolic protein
TU: Cytosolic protein
TV: Cytosolic protein
TW: Cytosolic protein
TX: Cytosolic protein
TY: Cytosolic protein
TZ: Cytosolic protein
Ta: Cytosolic protein
Tb: Cytosolic protein
Tc: Cytosolic protein
Td: Cytosolic protein
Te: Cytosolic protein
Tf: Cytosolic protein
Tg: Cytosolic protein
Th: Cytosolic protein
Ti: Cytosolic protein
Tj: Cytosolic protein
Tk: Cytosolic protein
Tl: Cytosolic protein
Tm: Cytosolic protein
Tn: Cytosolic protein
To: Cytosolic protein
Tp: Cytosolic protein
Tq: Cytosolic protein
Tr: Cytosolic protein
Ts: Cytosolic protein
Tt: Cytosolic protein
Tu: Cytosolic protein
Tv: Cytosolic protein
Tw: Cytosolic protein
Tx: Cytosolic protein
Ty: Cytosolic protein
Tz: Cytosolic protein
UA: Cytosolic protein
UB: Cytosolic protein
UC: Cytosolic protein
UD: Cytosolic protein
UE: Cytosolic protein
UF: Cytosolic protein
UG: Cytosolic protein
UH: Cytosolic protein
UI: Cytosolic protein
UJ: Cytosolic protein
UK: Cytosolic protein
UL: Cytosolic protein
UM: Cytosolic protein
UN: Cytosolic protein
UO: Cytosolic protein
UP: Cytosolic protein
UQ: Cytosolic protein
UR: Cytosolic protein
US: Cytosolic protein
UT: Cytosolic protein
UU: Cytosolic protein
UV: Cytosolic protein
UW: Cytosolic protein
UX: Cytosolic protein
UY: Cytosolic protein
UZ: Cytosolic protein
Ua: Cytosolic protein
Ub: Cytosolic protein
Uc: Cytosolic protein
Ud: Cytosolic protein
Ue: Cytosolic protein
Uf: Cytosolic protein
Ug: Cytosolic protein
Uh: Cytosolic protein
Ui: Cytosolic protein
Uj: Cytosolic protein
Uk: Cytosolic protein
Ul: Cytosolic protein
Um: Cytosolic protein
Un: Decoration protein P03
Uo: Decoration protein P03
Up: Decoration protein P03
Uq: Decoration protein P03
Ur: Decoration protein P03
Us: Decoration protein P03
Ut: Decoration protein P03
Uu: Decoration protein P03
Uv: Decoration protein P03
Uw: Decoration protein P03
Ux: Decoration protein P03
Uy: Decoration protein P03
Uz: Decoration protein P03
VA: Decoration protein P03
VB: Decoration protein P03
VC: Decoration protein P03
VD: Decoration protein P03
VE: Decoration protein P03
VF: Decoration protein P03
VG: Decoration protein P03
VH: Decoration protein P03
VI: Decoration protein P03
VJ: Decoration protein P03
VK: Decoration protein P03
VL: Decoration protein P03
VM: Decoration protein P03
VN: Decoration protein P03
VO: Decoration protein P03
VP: Decoration protein P03
VQ: Decoration protein P03
VR: Decoration protein P03
VS: Decoration protein P03
VT: Decoration protein P03
VU: Decoration protein P03
VV: Decoration protein P03
VW: Decoration protein P03
VX: Decoration protein P03
VY: Decoration protein P03
VZ: Decoration protein P03
Va: Decoration protein P03
Vb: Decoration protein P03
Vc: Decoration protein P03
Vd: Decoration protein P03
Ve: Decoration protein P03
Vf: Decoration protein P03
Vg: Decoration protein P03
Vh: Decoration protein P03
Vi: Decoration protein P03
Vj: Decoration protein P03
Vk: Decoration protein P03
Vl: Decoration protein P03
Vm: Decoration protein P03
Vn: Decoration protein P03
Vo: Decoration protein P03
Vp: Decoration protein P03
Vq: Decoration protein P03
Vr: Decoration protein P04
Vs: DUF228 domain-containing protein
Vt: DUF228 domain-containing protein
Vu: DUF228 domain-containing protein
Vv: DUF228 domain-containing protein
Vw: DUF228 domain-containing protein
Vx: DUF228 domain-containing protein
Vy: DUF228 domain-containing protein
Vz: DUF228 domain-containing protein
WA: DUF228 domain-containing protein
WB: DUF228 domain-containing protein
WC: DUF228 domain-containing protein
WD: DUF228 domain-containing protein
WE: DUF228 domain-containing protein
WF: DUF228 domain-containing protein
WG: DUF228 domain-containing protein
WH: DUF228 domain-containing protein
WI: DUF228 domain-containing protein
WJ: DUF228 domain-containing protein
WK: DUF228 domain-containing protein
WL: DUF228 domain-containing protein
WM: DUF228 domain-containing protein
WN: DUF228 domain-containing protein
WO: DUF228 domain-containing protein
WP: DUF228 domain-containing protein
WQ: DUF228 domain-containing protein
WR: DUF228 domain-containing protein
WS: Scaffold protein
WT: Scaffold protein
WU: Scaffold protein
WV: Scaffold protein
WW: Scaffold protein
WX: Scaffold protein
WY: Scaffold protein
WZ: Scaffold protein
Wa: Scaffold protein
Wb: Scaffold protein
Wc: Scaffold protein
Wd: Scaffold protein
We: Scaffold protein
Wf: Scaffold protein
Wg: Scaffold protein
Wh: Scaffold protein
Wi: Scaffold protein
Wj: Scaffold protein
Wk: Scaffold protein
Wl: Scaffold protein
Wm: Scaffold protein
Wn: Scaffold protein
Wo: Scaffold protein
Wp: Scaffold protein
Wq: Scaffold protein
Wr: Scaffold protein
Ws: Scaffold protein
Wt: Scaffold protein
Wu: Scaffold protein
Wv: Scaffold protein
Ww: Scaffold protein
Wx: Scaffold protein
Wy: Scaffold protein
Wz: Scaffold protein
XA: Scaffold protein
XB: Scaffold protein
XC: Scaffold protein
XD: Scaffold protein
XE: Scaffold protein
XF: Scaffold protein
XG: Scaffold protein
XH: Scaffold protein
XI: Scaffold protein
XJ: Scaffold protein
XK: Scaffold protein
XL: Scaffold protein
XM: Scaffold protein
XN: Scaffold protein
XO: Scaffold protein
XP: Scaffold protein
XQ: Scaffold protein
XR: Scaffold protein
XS: Scaffold protein
XT: Scaffold protein
XU: Scaffold protein
XV: Scaffold protein
XW: Scaffold protein
XX: Scaffold protein
XY: Scaffold protein
XZ: Scaffold protein
Xa: Scaffold protein
Xb: Scaffold protein
Xc: Scaffold protein
Xd: Scaffold protein
Xe: Scaffold protein
Xf: Scaffold protein
Xg: Scaffold protein
Xh: Scaffold protein
Xi: Scaffold protein
Xj: Scaffold protein
Xk: Scaffold protein
Xl: Scaffold protein
Xm: Scaffold protein
Xn: Scaffold protein
Xo: Scaffold protein
Xp: Scaffold protein
Xq: Scaffold protein
Xr: Scaffold protein
Xs: Scaffold protein
Xt: Scaffold protein
Xu: Scaffold protein
Xv: Scaffold protein
Xw: Scaffold protein
Xx: Putative phage portal protein
Xy: Putative phage portal protein
Xz: Putative phage portal protein
YA: Putative phage portal protein
YB: Putative phage portal protein
YC: Putative phage portal protein
YD: Putative phage portal protein
YE: Putative phage portal protein
YF: Putative phage portal protein
YG: Putative phage portal protein
YH: Putative phage portal protein
YI: Putative phage portal protein
YJ: Scaffold protein
YK: Scaffold protein
YL: Scaffold protein
YM: Scaffold protein
YN: Scaffold protein
YO: Scaffold protein
YP: Scaffold protein
YQ: Scaffold protein
YR: Scaffold protein
YS: Scaffold protein
YT: Scaffold protein
YU: Scaffold protein
YV: Scaffold protein
YW: Scaffold protein
YX: Scaffold protein
YY: Scaffold protein
YZ: Scaffold protein
Ya: Scaffold protein
Yb: Scaffold protein
Yc: Scaffold protein
Yd: Scaffold protein
Ye: Scaffold protein
Yf: Scaffold protein
Yg: Scaffold protein
Yh: Scaffold protein
Yi: Scaffold protein
Yj: Scaffold protein
Yk: Scaffold protein
Yl: Scaffold protein
Ym: Scaffold protein
Yn: Scaffold protein
Yo: Scaffold protein
Yp: Scaffold protein
Yq: Scaffold protein
Yr: Scaffold protein
Ys: Scaffold protein
Yt: Scaffold protein
Yu: Scaffold protein
Yv: Scaffold protein
Yw: Scaffold protein
Yx: Scaffold protein
Yy: Scaffold protein
Yz: Scaffold protein
ZA: Scaffold protein
ZB: Scaffold protein
ZC: Scaffold protein
ZD: Scaffold protein
ZE: Scaffold protein
ZF: Scaffold protein
ZG: Scaffold protein
ZH: Scaffold protein
ZI: Scaffold protein
ZJ: Scaffold protein
ZK: Scaffold protein
ZL: Scaffold protein
ZM: Scaffold protein
ZN: Scaffold protein
ZO: Scaffold protein
ZP: Scaffold protein
ZQ: Scaffold protein
ZR: Scaffold protein
ZS: Scaffold protein
ZT: Scaffold protein
ZU: Scaffold protein
ZV: Scaffold protein
ZW: Scaffold protein
ZX: Scaffold protein
ZY: Scaffold protein
ZZ: Scaffold protein
Za: Scaffold protein
Zb: Scaffold protein
Zc: Scaffold protein
Zd: Scaffold protein
Ze: Scaffold protein
Zf: Scaffold protein
Zg: Scaffold protein
Zh: Scaffold protein
Zi: Scaffold protein
Zj: Scaffold protein
Zk: Scaffold protein
Zl: Scaffold protein
Zm: Scaffold protein
Zn: Scaffold protein
Zo: Scaffold protein
Zp: Scaffold protein
Zq: Scaffold protein
Zr: Scaffold protein
Zs: Scaffold protein
Zt: Scaffold protein
Zu: Scaffold protein
Zv: Scaffold protein
Zw: Scaffold protein
Zx: Scaffold protein
Zy: Scaffold protein
Zz: Scaffold protein
aA: Scaffold protein
aB: Scaffold protein
aC: Scaffold protein
aD: Scaffold protein
aE: Scaffold protein
aF: Scaffold protein
aG: Scaffold protein
aH: Scaffold protein
aI: Scaffold protein
aJ: Scaffold protein
aK: Scaffold protein
aL: Scaffold protein
aM: Scaffold protein
aN: Scaffold protein
aO: Scaffold protein
aP: Scaffold protein
aQ: Scaffold protein
aR: Scaffold protein
aS: Scaffold protein
aT: Scaffold protein
aU: Scaffold protein
aV: Scaffold protein
aW: Scaffold protein
aX: Scaffold protein
aY: Scaffold protein
aZ: Scaffold protein
aa: Scaffold protein
ab: Scaffold protein
ac: Scaffold protein
ad: Scaffold protein
ae: Scaffold protein
af: Scaffold protein
ag: Scaffold protein
ah: Scaffold protein
ai: Scaffold protein
aj: Scaffold protein
ak: Scaffold protein
al: Scaffold protein
am: Scaffold protein
an: Scaffold protein
ao: Scaffold protein
ap: Scaffold protein
aq: Scaffold protein
ar: Scaffold protein
as: Scaffold protein
at: Scaffold protein
au: Scaffold protein
av: Scaffold protein
aw: Scaffold protein
ax: Scaffold protein
ay: Scaffold protein
az: Scaffold protein
bA: Scaffold protein
bB: Scaffold protein
bC: Scaffold protein
bD: Scaffold protein
bE: Scaffold protein
bF: Scaffold protein
bG: Scaffold protein
bH: Scaffold protein
bI: Scaffold protein
bJ: Scaffold protein
bK: Scaffold protein
bL: Scaffold protein
bM: Scaffold protein
bN: Scaffold protein
bO: Scaffold protein
bP: Scaffold protein
bQ: Scaffold protein
bR: Scaffold protein
bS: Scaffold protein
bT: Scaffold protein
bU: Scaffold protein
bV: Scaffold protein
bW: Scaffold protein
bX: Scaffold protein
bY: Scaffold protein
bZ: Scaffold protein
ba: Scaffold protein
bb: Scaffold protein
bc: Scaffold protein
bd: Scaffold protein
be: Scaffold protein
bf: Scaffold protein
bg: Scaffold protein
bh: Scaffold protein
bi: Scaffold protein
bj: Scaffold protein
bk: Scaffold protein
bl: Scaffold protein
bm: Scaffold protein
bn: Scaffold protein
bo: Scaffold protein
bp: Scaffold protein
bq: Scaffold protein
br: Scaffold protein
bs: Scaffold protein
bt: Scaffold protein
bu: Scaffold protein
bv: Scaffold protein
bw: Scaffold protein
bx: Scaffold protein
by: Scaffold protein
bz: Scaffold protein
cA: Scaffold protein
cB: Scaffold protein
cC: Scaffold protein
cD: Scaffold protein
cE: Scaffold protein
cF: Scaffold protein
cG: Scaffold protein
cH: Scaffold protein
cI: Scaffold protein
cJ: Scaffold protein
cK: Scaffold protein
cL: Scaffold protein
cM: Scaffold protein
cN: Scaffold protein
cO: Scaffold protein
cP: Scaffold protein
cQ: Scaffold protein
cR: Scaffold protein
cS: Scaffold protein
cT: Scaffold protein
cU: Scaffold protein
cV: Scaffold protein
cW: Scaffold protein
cX: Scaffold protein
cY: Scaffold protein
cZ: Scaffold protein
ca: Scaffold protein
cb: Scaffold protein
cc: Scaffold protein
cd: Scaffold protein
ce: Scaffold protein
cf: Scaffold protein
cg: Scaffold protein
ch: Scaffold protein
ci: Scaffold protein
cj: Scaffold protein
ck: Scaffold protein
cl: Scaffold protein
cm: Scaffold protein
cn: Scaffold protein
co: Scaffold protein
cp: Scaffold protein
cq: Scaffold protein
cr: Scaffold protein
cs: Scaffold protein
ct: Scaffold protein
cu: Scaffold protein
cv: Scaffold protein
cw: Scaffold protein
cx: Scaffold protein
cy: Scaffold protein
cz: Scaffold protein
dA: Scaffold protein
dB: Scaffold protein
dC: Scaffold protein
dD: Scaffold protein
dE: Scaffold protein
dF: Scaffold protein
dG: Scaffold protein
dH: Scaffold protein
dI: Scaffold protein
dJ: Scaffold protein
dK: Scaffold protein
dL: Scaffold protein
dM: Scaffold protein
dN: Scaffold protein
dO: Scaffold protein
dP: Scaffold protein
dQ: Scaffold protein
dR: Scaffold protein
dS: Scaffold protein
dT: Scaffold protein
dU: Scaffold protein
dV: Scaffold protein
dW: Scaffold protein
dX: Scaffold protein
dY: Scaffold protein
dZ: Scaffold protein
da: Scaffold protein
db: Scaffold protein
dc: Scaffold protein
dd: Scaffold protein
de: Scaffold protein
df: Scaffold protein
dg: Scaffold protein
dh: Scaffold protein
di: Scaffold protein
dj: Scaffold protein
dk: Scaffold protein
dl: Scaffold protein
dm: Scaffold protein
dn: Scaffold protein
do: Scaffold protein
dp: Scaffold protein
dq: Scaffold protein
dr: Scaffold protein
ds: Scaffold protein
dt: Scaffold protein
du: Scaffold protein
dv: Scaffold protein
dw: Scaffold protein
dx: Scaffold protein
dy: Scaffold protein
dz: Scaffold protein
eA: Scaffold protein
eB: Scaffold protein
eC: Scaffold protein
eD: Scaffold protein
eE: Scaffold protein
eF: Scaffold protein
eG: Scaffold protein
eH: Scaffold protein
eI: Scaffold protein
eJ: Scaffold protein
eK: Scaffold protein
eL: Scaffold protein
eM: Scaffold protein
eN: Scaffold protein
eO: Scaffold protein
eP: Scaffold protein
eQ: Scaffold protein
eR: Scaffold protein
eS: Scaffold protein
eT: Scaffold protein
eU: Scaffold protein
eV: Scaffold protein
eW: Scaffold protein
eX: Scaffold protein
eY: Scaffold protein
eZ: Scaffold protein
ea: Scaffold protein
eb: Scaffold protein
ec: Scaffold protein
ed: Scaffold protein
ee: Scaffold protein
ef: Scaffold protein
eg: Scaffold protein
eh: Scaffold protein
ei: Scaffold protein
ej: Scaffold protein
ek: Scaffold protein
el: Scaffold protein
em: Scaffold protein
en: Scaffold protein
eo: Scaffold protein
ep: Scaffold protein
eq: Scaffold protein
er: Scaffold protein
es: Scaffold protein
et: Scaffold protein
eu: Scaffold protein
ev: Scaffold protein
ew: Scaffold protein
ex: Scaffold protein
ey: Scaffold protein
ez: Scaffold protein
fA: Scaffold protein
fB: Scaffold protein
fC: Scaffold protein
fD: Scaffold protein
fE: Scaffold protein
fF: Scaffold protein
fG: Scaffold protein
fH: Scaffold protein
fI: Scaffold protein
fJ: Scaffold protein
fK: Scaffold protein
fL: Scaffold protein
fM: Scaffold protein
fN: Scaffold protein
fO: Scaffold protein
fP: Scaffold protein
fQ: Scaffold protein
fR: Scaffold protein
fS: Scaffold protein
fT: Scaffold protein
fU: Scaffold protein
fV: Scaffold protein
fW: Scaffold protein
fX: Scaffold protein
fY: Scaffold protein
fZ: Scaffold protein
fa: Scaffold protein
fb: Scaffold protein
fc: Scaffold protein
fd: Scaffold protein
fe: Scaffold protein
ff: Scaffold protein
fg: Scaffold protein
fh: Scaffold protein
fi: Scaffold protein
fj: Scaffold protein
fk: Scaffold protein
fl: Scaffold protein
fm: Scaffold protein
fn: Scaffold protein
fo: Scaffold protein
fp: Scaffold protein
fq: Scaffold protein
fr: Scaffold protein
fs: Scaffold protein
ft: Scaffold protein
fu: Scaffold protein
fv: Scaffold protein
fw: Scaffold protein
fx: Scaffold protein
fy: Scaffold protein
fz: Scaffold protein
gA: Scaffold protein
gB: Scaffold protein
gC: Scaffold protein
gD: Scaffold protein


Theoretical massNumber of molelcules
Total (without water)46,187,4521668
Polymers46,187,4521668
Non-polymers00
Water0
1


  • Idetical with deposited unit
  • defined by author&software
  • Evidence: electron microscopy, not applicable
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1

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Components

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Protein , 4 types, 1383 molecules AAABACADAEAFAGAHAIAJAKALAMANAOAPAQARASATAUAVAWAXAYAZAaAbAcAd...

#1: Protein ...
Cytosolic protein / Cytosol


Mass: 36255.551 Da / Num. of mol.: 415
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Borreliella burgdorferi B31 (bacteria) / Gene: BB_L06 / Production host: Escherichia coli BL21 (bacteria) / Variant (production host): AI / References: UniProt: Q9R3U6
#4: Protein ...
DUF228 domain-containing protein


Mass: 21274.934 Da / Num. of mol.: 130
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Borreliella burgdorferi B31 (bacteria) / Gene: BbuZS7_P05 / Production host: Escherichia coli BL21 (bacteria) / Variant (production host): AI / References: UniProt: A0A0H3BZR0
#5: Protein ...
Scaffold protein /


Mass: 26710.363 Da / Num. of mol.: 826
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Borreliella burgdorferi B31 (bacteria) / Gene: BB_L02 / Production host: Escherichia coli BL21 (bacteria) / Variant (production host): AI / References: UniProt: Q9R2Q2
#6: Protein
Putative phage portal protein


Mass: 47095.508 Da / Num. of mol.: 12
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Borreliella burgdorferi B31 (bacteria) / Gene: BB_L01 / Production host: Escherichia coli BL21 (bacteria) / Variant (production host): AI / References: UniProt: Q9R3K2

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Decoration protein ... , 2 types, 285 molecules BfBgBhBiBjBkBlBmBnBoBpBqBrBsBtBuBvBwBxByBzCACBCCCDCECFCGCHCI...

#2: Protein ...
Decoration protein P03


Mass: 20026.479 Da / Num. of mol.: 280
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Borreliella burgdorferi B31 (bacteria) / Gene: BB_L03 / Production host: Escherichia coli BL21 (bacteria) / Variant (production host): AI / References: UniProt: Q9R2Q0
#3: Protein
Decoration protein P04


Mass: 28067.344 Da / Num. of mol.: 5
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Borreliella burgdorferi B31 (bacteria) / Gene: BB_L04 / Production host: Escherichia coli BL21 (bacteria) / Variant (production host): AI / References: UniProt: Q9R3E0

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Experimental details

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Experiment

ExperimentMethod: ELECTRON MICROSCOPY
EM experimentAggregation state: PARTICLE / 3D reconstruction method: single particle reconstruction

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Sample preparation

ComponentName: Procapsid of Borrelia bacteriophage BB1 / Type: COMPLEX / Entity ID: all / Source: RECOMBINANT
Source (natural)Organism: Borreliella burgdorferi B31 (bacteria)
Source (recombinant)Organism: Escherichia coli BL21 (bacteria) / Strain: AI
Buffer solutionpH: 7.5
Buffer component
IDConc.NameFormulaBuffer-ID
120 mMTris-HClTris1
2100 mMsodium chlorideNaClSodium chloride1
310 mMmagnesium sulfateMgSO41
SpecimenConc.: 1 mg/ml / Embedding applied: NO / Shadowing applied: NO / Staining applied: NO / Vitrification applied: YES
Specimen supportGrid material: GOLD / Grid type: Quantifoil R1.2/1.3
VitrificationInstrument: FEI VITROBOT MARK IV / Cryogen name: ETHANE / Humidity: 100 % / Chamber temperature: 277 K

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Electron microscopy imaging

Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company
MicroscopyModel: FEI TITAN KRIOS
Electron gunElectron source: FIELD EMISSION GUN / Accelerating voltage: 300 kV / Illumination mode: FLOOD BEAM
Electron lensMode: BRIGHT FIELDBright-field microscopy / Nominal magnification: 165000 X / Nominal defocus max: 1800 nm / Nominal defocus min: 500 nm / Cs: 2.7 mm
Specimen holderCryogen: NITROGEN / Specimen holder model: FEI TITAN KRIOS AUTOGRID HOLDER
Image recordingElectron dose: 44 e/Å2 / Film or detector model: GATAN K3 (6k x 4k)
EM imaging opticsEnergyfilter name: GIF Bioquantum

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Processing

EM software
IDNameVersionCategory
1RELION3.1.3particle selection
4Gctf1.18CTF correction
7Coot0.9.8.4model fitting
9RELION3.1.3initial Euler assignment
10RELION3.1.3final Euler assignment
11RELION3.1.3classification
12RELION3.1.33D reconstruction
13PHENIX1.20.1-4487model refinement
CTF correctionType: PHASE FLIPPING AND AMPLITUDE CORRECTION
SymmetryPoint symmetry: C1 (asymmetric)
3D reconstructionResolution: 10.62 Å / Resolution method: FSC 0.143 CUT-OFF / Num. of particles: 5505 / Algorithm: BACK PROJECTION
Details: Half-maps for the 3D class were reconstructed with relion_reconstruct using the --class and --subset options. The actual particle distribution between the two subsets were 0.528 : 0.472.
Num. of class averages: 1 / Symmetry type: POINT
Atomic model buildingDetails: previous reconstruction / Source name: Other / Type: experimental model

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