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Yorodumi- PDB-8iq0: Crystal structure of hydrogen sulfide-bound superoxide dismutase ... -
+Open data
-Basic information
Entry | Database: PDB / ID: 8iq0 | ||||||
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Title | Crystal structure of hydrogen sulfide-bound superoxide dismutase in oxidized state | ||||||
Components | Superoxide dismutase [Cu-Zn] | ||||||
Keywords | OXIDOREDUCTASE / dimer | ||||||
Function / homology | Function and homology information neurofilament cytoskeleton organization / protein phosphatase 2B binding / relaxation of vascular associated smooth muscle / response to superoxide / peripheral nervous system myelin maintenance / retina homeostasis / negative regulation of cholesterol biosynthetic process / hydrogen peroxide biosynthetic process / auditory receptor cell stereocilium organization / regulation of protein kinase activity ...neurofilament cytoskeleton organization / protein phosphatase 2B binding / relaxation of vascular associated smooth muscle / response to superoxide / peripheral nervous system myelin maintenance / retina homeostasis / negative regulation of cholesterol biosynthetic process / hydrogen peroxide biosynthetic process / auditory receptor cell stereocilium organization / regulation of protein kinase activity / myeloid cell homeostasis / muscle cell cellular homeostasis / superoxide metabolic process / heart contraction / positive regulation of catalytic activity / superoxide dismutase / transmission of nerve impulse / superoxide dismutase activity / regulation of multicellular organism growth / response to axon injury / glutathione metabolic process / ovarian follicle development / embryo implantation / reactive oxygen species metabolic process / dendrite cytoplasm / removal of superoxide radicals / regulation of mitochondrial membrane potential / locomotory behavior / response to organic substance / positive regulation of cytokine production / sensory perception of sound / response to hydrogen peroxide / regulation of blood pressure / peroxisome / protein polyubiquitination / ubiquitin-protein transferase activity / response to heat / protein-folding chaperone binding / cytoplasmic vesicle / spermatogenesis / proteasome-mediated ubiquitin-dependent protein catabolic process / response to ethanol / intracellular iron ion homeostasis / negative regulation of neuron apoptotic process / positive regulation of MAPK cascade / copper ion binding / neuronal cell body / protein homodimerization activity / protein-containing complex / mitochondrion / zinc ion binding / nucleus / cytosol / cytoplasm Similarity search - Function | ||||||
Biological species | Bos taurus (cattle) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.88 Å | ||||||
Authors | Zhou, J.H. / Huang, W.X. / Cheng, R.X. / Zhang, P.J. / Zhu, Y.C. | ||||||
Funding support | China, 1items
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Citation | Journal: Cell Rep / Year: 2023 Title: Hydrogen sulfide functions as a micro-modulator bound at the copper active site of Cu/Zn-SOD to regulate the catalytic activity of the enzyme. Authors: Wu, D.D. / Jin, S. / Cheng, R.X. / Cai, W.J. / Xue, W.L. / Zhang, Q.Q. / Yang, L.J. / Zhu, Q. / Li, M.Y. / Lin, G. / Wang, Y.Z. / Mu, X.P. / Wang, Y. / Zhang, I.Y. / Zhang, Q. / Chen, Y. / ...Authors: Wu, D.D. / Jin, S. / Cheng, R.X. / Cai, W.J. / Xue, W.L. / Zhang, Q.Q. / Yang, L.J. / Zhu, Q. / Li, M.Y. / Lin, G. / Wang, Y.Z. / Mu, X.P. / Wang, Y. / Zhang, I.Y. / Zhang, Q. / Chen, Y. / Cai, S.Y. / Tan, B. / Li, Y. / Chen, Y.Q. / Zhang, P.J. / Sun, C. / Yin, Y. / Wang, M.J. / Zhu, Y.Z. / Tao, B.B. / Zhou, J.H. / Huang, W.X. / Zhu, Y.C. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 8iq0.cif.gz | 986.1 KB | Display | PDBx/mmCIF format |
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PDB format | pdb8iq0.ent.gz | 737.8 KB | Display | PDB format |
PDBx/mmJSON format | 8iq0.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/iq/8iq0 ftp://data.pdbj.org/pub/pdb/validation_reports/iq/8iq0 | HTTPS FTP |
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-Related structure data
Related structure data | 8iq1C C: citing same article (ref.) |
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Similar structure data | Similarity search - Function & homologyF&H Search |
-Links
-Assembly
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Noncrystallographic symmetry (NCS) | NCS domain:
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