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Open data
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Basic information
| Entry | Database: PDB / ID: 8bdf | |||||||||||||||
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| Title | Tubulin-taxane-2a complex | |||||||||||||||
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Keywords | CELL CYCLE / TUBULIN FOLD / CYTOSKELETON / MICROTUBULE | |||||||||||||||
| Function / homology | Function and homology informationtubulin-tyrosine ligase activity / positive regulation of axon guidance / microtubule depolymerization / regulation of microtubule polymerization or depolymerization / microtubule-based process / cytoplasmic microtubule / tubulin binding / cellular response to interleukin-4 / spindle microtubule / protein modification process ...tubulin-tyrosine ligase activity / positive regulation of axon guidance / microtubule depolymerization / regulation of microtubule polymerization or depolymerization / microtubule-based process / cytoplasmic microtubule / tubulin binding / cellular response to interleukin-4 / spindle microtubule / protein modification process / structural constituent of cytoskeleton / microtubule cytoskeleton organization / neuron migration / neuron projection development / mitotic cell cycle / double-stranded RNA binding / microtubule cytoskeleton / growth cone / Hydrolases; Acting on acid anhydrides; Acting on GTP to facilitate cellular and subcellular movement / microtubule / neuron projection / cilium / protein heterodimerization activity / nucleotide binding / GTPase activity / ubiquitin protein ligase binding / GTP binding / Golgi apparatus / metal ion binding / cytoplasm / cytosol Similarity search - Function | |||||||||||||||
| Biological species | ![]() ![]() ![]() | |||||||||||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / FOURIER SYNTHESIS / Resolution: 1.95 Å | |||||||||||||||
Authors | Prota, A.E. / Lucena-Agell, D. / Ma, Y. / Estevez-Gallego, J. / Li, S. / Bargsten, K. / Altmann, K.H. / Gaillard, N. / Kamimura, S. / Muehlethaler, T. ...Prota, A.E. / Lucena-Agell, D. / Ma, Y. / Estevez-Gallego, J. / Li, S. / Bargsten, K. / Altmann, K.H. / Gaillard, N. / Kamimura, S. / Muehlethaler, T. / Gago, F. / Oliva, M.A. / Steinmetz, M.O. / Fang, W.S. / Diaz, J.F. | |||||||||||||||
| Funding support | Switzerland, Spain, European Union, 4items
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Citation | Journal: Elife / Year: 2023Title: Structural insight into the stabilization of microtubules by taxanes. Authors: Prota, A.E. / Lucena-Agell, D. / Ma, Y. / Estevez-Gallego, J. / Li, S. / Bargsten, K. / Josa-Prado, F. / Altmann, K.H. / Gaillard, N. / Kamimura, S. / Muhlethaler, T. / Gago, F. / Oliva, M.A. ...Authors: Prota, A.E. / Lucena-Agell, D. / Ma, Y. / Estevez-Gallego, J. / Li, S. / Bargsten, K. / Josa-Prado, F. / Altmann, K.H. / Gaillard, N. / Kamimura, S. / Muhlethaler, T. / Gago, F. / Oliva, M.A. / Steinmetz, M.O. / Fang, W.S. / Diaz, J.F. | |||||||||||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 8bdf.cif.gz | 915.8 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb8bdf.ent.gz | 753 KB | Display | PDB format |
| PDBx/mmJSON format | 8bdf.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 8bdf_validation.pdf.gz | 2.8 MB | Display | wwPDB validaton report |
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| Full document | 8bdf_full_validation.pdf.gz | 2.9 MB | Display | |
| Data in XML | 8bdf_validation.xml.gz | 87.4 KB | Display | |
| Data in CIF | 8bdf_validation.cif.gz | 120.5 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/bd/8bdf ftp://data.pdbj.org/pub/pdb/validation_reports/bd/8bdf | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 8bdeC ![]() 8bdgC ![]() 5lxtS S: Starting model for refinement C: citing same article ( |
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| Similar structure data | Similarity search - Function & homology F&H Search |
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Assembly
| Deposited unit | ![]()
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| Unit cell |
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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About Yorodumi






X-RAY DIFFRACTION
Switzerland,
Spain, European Union, 4items
Citation


PDBj





