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Open data
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Basic information
| Entry | Database: PDB / ID: 8a0y | ||||||
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| Title | Crystal structure of mouse contactin 2 immunoglobulin domains | ||||||
Components | Contactin-2 | ||||||
Keywords | CELL ADHESION / cell adhesion molecule(s) / immunoglobulin / glycoprotein / myelin / juxtaparanodal / contactin / TAG-1 / axonin-1 / TAX-1 / horseshoe | ||||||
| Function / homology | Function and homology informationestablishment of protein localization to juxtaparanode region of axon / presynaptic membrane organization / regulation of axon diameter / positive regulation of adenosine receptor signaling pathway / regulation of astrocyte differentiation / reduction of food intake in response to dietary excess / clustering of voltage-gated potassium channels / cell adhesion mediator activity / cerebral cortex GABAergic interneuron migration / protein localization to juxtaparanode region of axon ...establishment of protein localization to juxtaparanode region of axon / presynaptic membrane organization / regulation of axon diameter / positive regulation of adenosine receptor signaling pathway / regulation of astrocyte differentiation / reduction of food intake in response to dietary excess / clustering of voltage-gated potassium channels / cell adhesion mediator activity / cerebral cortex GABAergic interneuron migration / protein localization to juxtaparanode region of axon / central nervous system myelination / positive regulation of protein processing / G protein-coupled adenosine receptor signaling pathway / axon initial segment / juxtaparanode region of axon / node of Ranvier / axonal fasciculation / regulation of cell morphogenesis / central nervous system neuron differentiation / adult walking behavior / negative regulation of neuron differentiation / fat cell differentiation / response to dietary excess / regulation of neuronal synaptic plasticity / side of membrane / axon guidance / learning / establishment of localization in cell / protein processing / receptor internalization / microtubule cytoskeleton organization / neuron migration / neuron projection development / myelin sheath / carbohydrate binding / postsynaptic membrane / neuron projection / axon / neuronal cell body / cell surface Similarity search - Function | ||||||
| Biological species | ![]() | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.5 Å | ||||||
Authors | Chataigner, L.M.P. / Janssen, B.J.C. | ||||||
| Funding support | European Union, 1items
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Citation | Journal: Structure / Year: 2024Title: Contactin 2 homophilic adhesion structure and conformational plasticity. Authors: Chataigner, L.M.P. / Tharichen, L. / Beugelink, J.W. / Granneman, J.C.M. / Mokiem, N.J. / Snijder, J. / Forster, F. / Janssen, B.J.C. | ||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 8a0y.cif.gz | 1010.4 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb8a0y.ent.gz | 867.1 KB | Display | PDB format |
| PDBx/mmJSON format | 8a0y.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 8a0y_validation.pdf.gz | 2.9 MB | Display | wwPDB validaton report |
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| Full document | 8a0y_full_validation.pdf.gz | 2.9 MB | Display | |
| Data in XML | 8a0y_validation.xml.gz | 62 KB | Display | |
| Data in CIF | 8a0y_validation.cif.gz | 82.1 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/a0/8a0y ftp://data.pdbj.org/pub/pdb/validation_reports/a0/8a0y | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 2om5S S: Starting model for refinement |
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| Similar structure data | Similarity search - Function & homology F&H Search |
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Assembly
| Deposited unit | ![]()
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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