Entry | Database: PDB / ID: 7ywu |
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Title | Eugenol oxidase from rhodococcus jostii: mutant S81H, A423M, H434Y, S394V, I445D, S518P |
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Components | Probable vanillyl-alcohol oxidase |
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Keywords | OXIDOREDUCTASE / biocatalysis / thermostability / oxidase / flavoenzyme |
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Function / homology | Function and homology information
vanillyl-alcohol oxidase / vanillyl-alcohol oxidase activity / D-lactate dehydrogenase (cytochrome) activity / lactate catabolic process / D-lactate dehydrogenase (NAD+) activity / FAD binding / metal ion bindingSimilarity search - Function FAD-linked oxidase, C-terminal / Cytokinin dehydrogenase, C-terminal domain superfamily / FAD linked oxidases, C-terminal domain / Vanillyl-alcohol oxidase, C-terminal subdomain 2 / FAD-linked oxidase-like, C-terminal / FAD linked oxidase, N-terminal / FAD binding domain / FAD-binding, type PCMH, subdomain 1 / FAD-binding domain, PCMH-type / PCMH-type FAD-binding domain profile. ...FAD-linked oxidase, C-terminal / Cytokinin dehydrogenase, C-terminal domain superfamily / FAD linked oxidases, C-terminal domain / Vanillyl-alcohol oxidase, C-terminal subdomain 2 / FAD-linked oxidase-like, C-terminal / FAD linked oxidase, N-terminal / FAD binding domain / FAD-binding, type PCMH, subdomain 1 / FAD-binding domain, PCMH-type / PCMH-type FAD-binding domain profile. / FAD-binding, type PCMH, subdomain 2 / FAD-binding, type PCMH-like superfamilySimilarity search - Domain/homology 2-methoxy-4-(prop-2-en-1-yl)phenol / FLAVIN-ADENINE DINUCLEOTIDE / HEXANE-1,6-DIOL / Chem-I7I / Probable vanillyl-alcohol oxidaseSimilarity search - Component |
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Biological species | Rhodococcus jostii (bacteria) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.8 Å |
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Authors | Alvigini, L. / Mattevi, A. |
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Funding support | European Union, 1items Organization | Grant number | Country |
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European Union (EU) | H2020-837890 | European Union |
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Citation | Journal: Nat Commun / Year: 2022 Title: Structure- and computational-aided engineering of an oxidase to produce isoeugenol from a lignin-derived compound. Authors: Guo, Y. / Alvigini, L. / Trajkovic, M. / Alonso-Cotchico, L. / Monza, E. / Savino, S. / Maric, I. / Mattevi, A. / Fraaije, M.W. |
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History | Deposition | Feb 14, 2022 | Deposition site: PDBE / Processing site: PDBE |
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Revision 1.0 | Nov 16, 2022 | Provider: repository / Type: Initial release |
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Revision 1.1 | Dec 7, 2022 | Group: Database references / Category: citation / citation_author Item: _citation.country / _citation.journal_abbrev ..._citation.country / _citation.journal_abbrev / _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_DOI / _citation.pdbx_database_id_PubMed / _citation.title / _citation.year |
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Revision 1.2 | Jan 31, 2024 | Group: Data collection / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model / struct_ncs_dom_lim Item: _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id ..._struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id |
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Revision 1.3 | Nov 13, 2024 | Group: Structure summary / Category: pdbx_entry_details / pdbx_modification_feature / Item: _pdbx_entry_details.has_protein_modification |
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