[English] 日本語
Yorodumi- PDB-7w76: Crystal structure of the K. lactis Bre1 RBD in complex with Rad6,... -
+
Open data
-
Basic information
| Entry | Database: PDB / ID: 7w76 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Title | Crystal structure of the K. lactis Bre1 RBD in complex with Rad6, crystal form II | |||||||||
Components |
| |||||||||
Keywords | GENE REGULATION / Complex / ubiquitin / ubiquitin ligase | |||||||||
| Function / homology | Function and homology informationHULC complex / E2 ubiquitin-conjugating enzyme / sporulation resulting in formation of a cellular spore / ubiquitin conjugating enzyme activity / RING-type E3 ubiquitin transferase / ubiquitin protein ligase activity / chromatin organization / protein ubiquitination / DNA repair / zinc ion binding ...HULC complex / E2 ubiquitin-conjugating enzyme / sporulation resulting in formation of a cellular spore / ubiquitin conjugating enzyme activity / RING-type E3 ubiquitin transferase / ubiquitin protein ligase activity / chromatin organization / protein ubiquitination / DNA repair / zinc ion binding / ATP binding / nucleus / cytoplasm Similarity search - Function | |||||||||
| Biological species | Kluyveromyces lactis NRRL Y-1140 (yeast) | |||||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.05 Å | |||||||||
Authors | Shi, M. / Zhao, J. / Xiang, S. | |||||||||
| Funding support | China, 2items
| |||||||||
Citation | Journal: Elife / Year: 2023Title: Structural basis for the Rad6 activation by the Bre1 N-terminal domain. Authors: Shi, M. / Zhao, J. / Zhang, S. / Huang, W. / Li, M. / Bai, X. / Zhang, W. / Zhang, K. / Chen, X. / Xiang, S. | |||||||||
| History |
|
-
Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
|---|
-
Downloads & links
-
Download
| PDBx/mmCIF format | 7w76.cif.gz | 401.1 KB | Display | PDBx/mmCIF format |
|---|---|---|---|---|
| PDB format | pdb7w76.ent.gz | 331.5 KB | Display | PDB format |
| PDBx/mmJSON format | 7w76.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 7w76_validation.pdf.gz | 489.6 KB | Display | wwPDB validaton report |
|---|---|---|---|---|
| Full document | 7w76_full_validation.pdf.gz | 498.7 KB | Display | |
| Data in XML | 7w76_validation.xml.gz | 32.9 KB | Display | |
| Data in CIF | 7w76_validation.cif.gz | 44.2 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/w7/7w76 ftp://data.pdbj.org/pub/pdb/validation_reports/w7/7w76 | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 7w75C ![]() 1ayzS C: citing same article ( S: Starting model for refinement |
|---|---|
| Similar structure data | Similarity search - Function & homology F&H Search |
-
Links
-
Assembly
| Deposited unit | ![]()
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ![]()
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| 2 | ![]()
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Unit cell |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Components on special symmetry positions |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
|
Movie
Controller
Components
About Yorodumi



Kluyveromyces lactis NRRL Y-1140 (yeast)
X-RAY DIFFRACTION
China, 2items
Citation

PDBj






