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Open data
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Basic information
Entry | Database: PDB / ID: 7uv2 | ||||||
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Title | Ana o 1 Leader Sequence Residues 82-132 | ||||||
![]() | Vicilin-like protein | ||||||
![]() | ALLERGEN / Seed storage | ||||||
Function / homology | Cupin / Cupin 1 / Cupin / RmlC-like cupin domain superfamily / RmlC-like jelly roll fold / Vicilin-like protein![]() | ||||||
Biological species | ![]() | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
![]() | Mueller, G.A. / Foo, A.C.Y. / DeRose, E.F. | ||||||
Funding support | ![]()
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![]() | ![]() Title: Structure and IgE Cross-Reactivity among Cashew, Pistachio, Walnut, and Peanut Vicilin-Buried Peptides. Authors: Foo, A.C.Y. / Nesbit, J.B. / Gipson, S.A.Y. / DeRose, E.F. / Cheng, H. / Hurlburt, B.K. / Kulis, M.D. / Kim, E.H. / Dreskin, S.C. / Mustafa, S. / Maleki, S.J. / Mueller, G.A. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 351.6 KB | Display | ![]() |
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PDB format | ![]() | 298.3 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 401.3 KB | Display | ![]() |
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Full document | ![]() | 487.8 KB | Display | |
Data in XML | ![]() | 18.5 KB | Display | |
Data in CIF | ![]() | 30.8 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 7uv1C ![]() 7uv3C ![]() 7uv4C C: citing same article ( |
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Similar structure data | Similarity search - Function & homology ![]() |
Other databases |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 6807.526 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
Details | Type: solution / Contents: 50 uM DSS, 90% H2O/10% D2O / Details: 90% PBS pH 7.4, 50 uM DSS reference standard / Label: 13C 15N Ao1.2 / Solvent system: 90% H2O/10% D2O |
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Sample | Conc.: 50 uM / Component: DSS / Isotopic labeling: natural abundance |
Sample conditions | Details: 146 mM NaCl (8g/L) 2.68 mM KCl (0.2g/L) 4.2 mM Na2HPO4.7H20 (1.15g/L) 1.47 mM KH2PO4 (0.2g/L) Ionic strength: 150 mM / Label: PBS / pH: 7.5 / Pressure: 1 atm / Temperature: 298.15 K |
-NMR measurement
NMR spectrometer | Type: Varian INOVA / Manufacturer: Varian / Model: INOVA / Field strength: 600 MHz |
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Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 3 | |||||||||||||||||||||
NMR representative | Selection criteria: lowest energy | |||||||||||||||||||||
NMR ensemble | Conformer selection criteria: all calculated structures submitted Conformers calculated total number: 20 / Conformers submitted total number: 20 |