[English] 日本語
Yorodumi
- PDB-7q83: Crystal structure of S. cerevisiae Sso2 in complex with the pleck... -

+
Open data


ID or keywords:

Loading...

-
Basic information

Entry
Database: PDB / ID: 7q83
TitleCrystal structure of S. cerevisiae Sso2 in complex with the pleckstrin homology domain of Sec3
Components
  • Exocyst complex component SEC3
  • Protein SSO2
KeywordsEXOCYTOSIS / exocyst / membrane trafficking / protein complex / yeast
Function / homology
Function and homology information


exocyst assembly / exocyst localization / endoplasmic reticulum inheritance / Disinhibition of SNARE formation / vesicle fusion to plasma membrane / ascospore-type prospore assembly / exocyst / Golgi vesicle fusion to target membrane / Insertion of tail-anchored proteins into the endoplasmic reticulum membrane / trans-Golgi Network Vesicle Budding ...exocyst assembly / exocyst localization / endoplasmic reticulum inheritance / Disinhibition of SNARE formation / vesicle fusion to plasma membrane / ascospore-type prospore assembly / exocyst / Golgi vesicle fusion to target membrane / Insertion of tail-anchored proteins into the endoplasmic reticulum membrane / trans-Golgi Network Vesicle Budding / prospore membrane / incipient cellular bud site / cellular bud tip / vesicle docking / SNARE complex / SNAP receptor activity / vesicle fusion / cellular bud neck / Golgi to plasma membrane transport / phosphatidic acid binding / mating projection tip / vesicle docking involved in exocytosis / exocytosis / phosphatidylinositol-4,5-bisphosphate binding / endomembrane system / SNARE binding / cell periphery / intracellular protein transport / small GTPase binding / protein transport / Golgi membrane / endoplasmic reticulum / plasma membrane / cytoplasm
Similarity search - Function
Exocyst complex component Sec3, C-terminal / Exocyst complex component Sec3, PIP2-binding N-terminal domain / : / Exocyst complex component Sec3, coiled-coil / Exocyst complex component SEC3 N-terminal PIP2 binding PH / Exocyst complex component Sec3, C-terminal / Exocyst complex component SEC3 N-terminal PIP2 binding PH / Syntaxin / Syntaxin N-terminal domain / Syntaxin, N-terminal domain ...Exocyst complex component Sec3, C-terminal / Exocyst complex component Sec3, PIP2-binding N-terminal domain / : / Exocyst complex component Sec3, coiled-coil / Exocyst complex component SEC3 N-terminal PIP2 binding PH / Exocyst complex component Sec3, C-terminal / Exocyst complex component SEC3 N-terminal PIP2 binding PH / Syntaxin / Syntaxin N-terminal domain / Syntaxin, N-terminal domain / SNARE domain / Syntaxin / Syntaxin/epimorphin, conserved site / Syntaxin / epimorphin family signature. / SNARE / Helical region found in SNAREs / t-SNARE coiled-coil homology domain profile. / Target SNARE coiled-coil homology domain
Similarity search - Domain/homology
Exocyst complex component SEC3 / Protein SSO2
Similarity search - Component
Biological speciesSaccharomyces cerevisiae (brewer's yeast)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.19 Å
AuthorsZhang, Y. / Dong, G.
Funding support Austria, 1items
OrganizationGrant numberCountry
Austrian Science FundP28231-B28 Austria
CitationJournal: Elife / Year: 2022
Title: Double NPY motifs at the N-terminus of the yeast t-SNARE Sso2 synergistically bind Sec3 to promote membrane fusion.
Authors: Peer, M. / Yuan, H. / Zhang, Y. / Korbula, K. / Novick, P. / Dong, G.
History
DepositionNov 9, 2021Deposition site: PDBE / Processing site: PDBE
Revision 1.0Aug 31, 2022Provider: repository / Type: Initial release
Revision 1.1Jan 31, 2024Group: Data collection / Refinement description
Category: chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model
Revision 1.2Nov 20, 2024Group: Structure summary / Category: pdbx_entry_details / pdbx_modification_feature

-
Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

-
Assembly

Deposited unit
A: Exocyst complex component SEC3
B: Protein SSO2
C: Exocyst complex component SEC3
D: Protein SSO2


Theoretical massNumber of molelcules
Total (without water)120,0984
Polymers120,0984
Non-polymers00
Water7,530418
1
A: Exocyst complex component SEC3
B: Protein SSO2


Theoretical massNumber of molelcules
Total (without water)60,0492
Polymers60,0492
Non-polymers00
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area2120 Å2
ΔGint-5 kcal/mol
Surface area17730 Å2
MethodPISA
2
C: Exocyst complex component SEC3
D: Protein SSO2


Theoretical massNumber of molelcules
Total (without water)60,0492
Polymers60,0492
Non-polymers00
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area2090 Å2
ΔGint-4 kcal/mol
Surface area17690 Å2
MethodPISA
Unit cell
Length a, b, c (Å)50.961, 58.402, 83.286
Angle α, β, γ (deg.)104.284, 98.494, 113.198
Int Tables number1
Space group name H-MP1
Space group name HallP1
Symmetry operation#1: x,y,z

-
Components

#1: Protein Exocyst complex component SEC3 / Protein PSL1


Mass: 28513.105 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (yeast)
Strain: ATCC 204508 / S288c / Gene: SEC3, PSL1, YER008C / Production host: Escherichia coli BL21(DE3) (bacteria) / References: UniProt: P33332
#2: Protein Protein SSO2


Mass: 31535.662 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
Details: In chain B, the sequence "ANPYE" in the structure should be aligned to position 8-12 of the sample sequence. Similarly, in chain D, the sequence "AAAANNPYA" in the structure should be ...Details: In chain B, the sequence "ANPYE" in the structure should be aligned to position 8-12 of the sample sequence. Similarly, in chain D, the sequence "AAAANNPYA" in the structure should be aligned to position 10-18 of the sample sequence.
Source: (gene. exp.) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (yeast)
Strain: ATCC 204508 / S288c / Gene: SSO2, YMR183C, YM8010.13C / Production host: Escherichia coli BL21(DE3) (bacteria) / References: UniProt: P39926
#3: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 418 / Source method: isolated from a natural source / Formula: H2O
Has protein modificationY

-
Experimental details

-
Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

-
Sample preparation

CrystalDensity Matthews: 1.77 Å3/Da / Density % sol: 30.52 %
Description: Needle-shaped crystals by approximately 10, 10, and 100 micrometer
Crystal growTemperature: 295 K / Method: vapor diffusion, sitting drop / pH: 5
Details: 0.1 M sodium acetate (pH 5.0), 0.2 M ammonium acetate, and 30% (w/v) PEG 4,000

-
Data collection

DiffractionMean temperature: 100 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: ESRF / Beamline: ID23-1 / Wavelength: 0.9793 Å
DetectorType: DECTRIS PILATUS 6M / Detector: PIXEL / Date: Feb 22, 2014
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.9793 Å / Relative weight: 1
ReflectionResolution: 2.19→19.95 Å / Num. obs: 40853 / % possible obs: 96.08 % / Redundancy: 4 % / Biso Wilson estimate: 31.13 Å2 / CC1/2: 0.99 / CC star: 0.997 / Rmerge(I) obs: 0.1641 / Rpim(I) all: 0.09332 / Rrim(I) all: 0.1894 / Net I/σ(I): 6.73
Reflection shellResolution: 2.19→2.27 Å / Redundancy: 3.9 % / Rmerge(I) obs: 1.094 / Mean I/σ(I) obs: 1.18 / Num. unique obs: 3771 / CC1/2: 0.438 / CC star: 0.781 / Rpim(I) all: 0.636 / % possible all: 89.79

-
Processing

Software
NameVersionClassification
PHENIX1.19.1_4122+SVNrefinement
PHENIX1.19.1_4122+SVNrefinement
XDSdata reduction
XDSdata scaling
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: 5M4Y

5m4y


Resolution: 2.19→19.95 Å / SU ML: 0.3097 / Cross valid method: FREE R-VALUE / σ(F): 1.97 / Phase error: 25.8861
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflection
Rfree0.2394 2008 4.95 %
Rwork0.1967 38581 -
obs0.1988 40589 96.2 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 40.87 Å2
Refinement stepCycle: LAST / Resolution: 2.19→19.95 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms5419 0 0 418 5837
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.00245507
X-RAY DIFFRACTIONf_angle_d0.4897414
X-RAY DIFFRACTIONf_chiral_restr0.037810
X-RAY DIFFRACTIONf_plane_restr0.0027971
X-RAY DIFFRACTIONf_dihedral_angle_d4.6688714
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.19-2.250.34931320.28882522X-RAY DIFFRACTION87.25
2.25-2.310.31381400.27072748X-RAY DIFFRACTION96.72
2.31-2.370.3031470.26182771X-RAY DIFFRACTION96.59
2.37-2.450.3091440.25332785X-RAY DIFFRACTION96.86
2.45-2.540.291490.24972772X-RAY DIFFRACTION96.18
2.54-2.640.32651430.23492740X-RAY DIFFRACTION96.78
2.64-2.760.27441390.22512744X-RAY DIFFRACTION95.5
2.76-2.910.25251470.212776X-RAY DIFFRACTION97.17
2.91-3.090.24011460.20452786X-RAY DIFFRACTION97.64
3.09-3.320.21521440.19282775X-RAY DIFFRACTION96.82
3.32-3.660.21411390.17462777X-RAY DIFFRACTION96.59
3.66-4.180.20711480.16122803X-RAY DIFFRACTION97.65
4.18-5.250.20961400.15462772X-RAY DIFFRACTION97.07
5.25-19.950.2071500.18072810X-RAY DIFFRACTION98.08
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL11 (°2)L12 (°2)L13 (°2)L22 (°2)L23 (°2)L33 (°2)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T11 (Å2)T12 (Å2)T13 (Å2)T22 (Å2)T23 (Å2)T33 (Å2)Origin x (Å)Origin y (Å)Origin z (Å)
15.633796158722.751692341251.782879655393.713879800961.389375259943.30992900078-0.09353425473830.4090850646970.060918147395-0.3969206554880.0622350635006-0.100052045460.1731927008480.3061917090040.03512752121570.2589700304410.03642927518650.03823402217580.368197021018-0.03997572299040.30732892199816.9201918359-32.1361873799-60.6143324307
22.922136398012.86168910151.026592726635.911415327161.533921990631.0205840563-0.0485124466802-0.6176407161431.12391707834-0.0665740055682-0.129941930798-0.031588080962-0.8741339918750.3910525211080.2491999694140.466664843374-0.141814770382-0.08170237281330.595513638495-0.1132028665220.50430399774126.9628216415-18.6847631456-49.0177812826
32.075550271050.102583485897-0.09731291633351.83261346016-0.8225067761933.29067386756-0.07631686233810.2802971466750.1535315050060.008960788071790.1799874349860.154608013021-0.437770742965-0.582020252971-0.08879008171590.3070071474050.03388358533820.004189558323110.308055299020.02371809808360.2087376244713.10171566195-22.317458253-56.556979628
41.719464742080.0886155139851-0.5535636473921.30747375176-0.2367650732473.502076685720.148801240448-0.1461358327170.1662679385220.144777045985-0.228256838214-0.0606248242704-0.6328628642040.5696727074540.05993994975790.338816083076-0.05805699298270.01252908662440.28195390245-0.009351797956180.28994997478714.5303857489-21.4982010048-49.3997407021
51.8744220794-0.03190851695970.1474055795112.45900528805-0.5704647800113.22553472618-0.03820129839180.134207957217-0.147134301292-0.03437730940810.1093209363960.204774415944-0.0905535100666-0.487901260528-0.05970117214270.185274853154-0.01284116105810.01538717447340.2546629992760.04497372178490.2289393066081.10914394641-29.6569249406-48.5305020981
62.555623056420.881939670432-0.2357324867164.0038681616-0.9959039191313.271995770660.0533987823805-0.344159616313-0.5707546117830.165379396855-0.10110057619-0.05772167457180.3878280159-0.06466829762270.09671963488080.2745809881910.003621131802220.03470793540040.2787364755620.06010523811360.3313202464931.31776428615-36.5571591401-39.4542700861
75.328935581630.04380844772920.2652117460826.8701476252-2.049247162344.91552782307-0.08571797516640.0866119929933-0.2360159359511.03504692332-0.195043665630.6083226999590.194684980539-0.5459287595140.3534595592920.4366129574330.0589796280270.1292850179460.3712389031160.001293062390990.423550453456-1.65817784334-36.3457647325-31.3933982259
80.1185618963920.573046197927-0.4525513700752.59368605076-1.898725104661.38191879264-0.3919763170840.157691143224-0.07518925791110.2038092077990.541087890695-1.50357169092-0.139992526694-0.326941286704-0.1431036378050.398936889674-0.016256191638-0.03436990485250.433831411299-0.06912943351230.53272594783411.9595660873-51.250423208-54.09607218
91.15686880924-0.373681994653-0.7337150969813.232665085343.861361595124.678290504170.1584405889270.0281120078885-0.003024057461920.0155491990008-0.177243038295-0.071090480338-0.057491204519-0.306182302239-0.01269759094410.282348527069-0.003630028604060.008263523140810.216307811680.05669810673610.2886805590927.49914348573-54.7637186206-29.1480703897
101.84238605098-0.443259363409-0.6574624190142.241805722230.6764513450123.279891069550.1516512597980.00857961295405-0.02412474905560.0148406128393-0.0693754923904-0.254370610451-0.009413567400910.0559151871358-0.08855031714030.2474082875-0.00970928862628-0.01923431217980.2125532540070.06732214188080.31492683808111.5536449051-49.2012990737-31.3153876105
111.94238804757-0.475215272672-0.8160164030643.109258047220.5542445307071.5202139893-0.129586373347-0.1676432908710.36283912491-0.2014917079710.0372382781809-0.155919979411-0.6469525211020.273920557068-0.1181248616870.418553019568-0.0282525953882-0.001609134947030.3049205571680.06843146991910.47331965878917.9786915822-40.6244046773-30.0218870599
121.350258815010.471162257965-0.1576977061495.84869250517-3.092464294055.41019817799-0.0618548771672-0.456361328745-0.4514566323630.418002507842-0.02066801131410.191185953831-0.486955489082-0.5294748966050.04744427095540.3321993850440.1279129290570.06925117296560.3723275163440.0604082168230.371908541530.153287168772-23.3261344809-72.9044494165
132.570279956181.20170469943-1.379658375942.65583089831-1.542718865721.704340031960.311731525770.1613401721990.698321272564-0.1193436618810.0318633393463-0.994345791444-0.1735172207830.356040457342-0.343991754930.7501828031270.08677128375140.1104985588460.3524022436960.05310138011430.5819156548185.61263050877-7.49149534391-84.3861122045
140.882183922817-0.288151657492-0.1996230938381.19206388671-0.1965155896951.53542491682-0.0666395530286-0.177469557974-0.01504767267350.1461548572050.103388724808-0.1221875258040.01507376337370.184246240077-0.02905770174750.213496235553-0.0126829001227-0.01718306276630.218811971188-0.01138998651830.21065061502316.0258942157-29.2642217844-76.8620464023
151.95982949987-0.787378719534-0.1004786176772.106513497690.9631184531883.49386933096-0.0741382280580.0786504882544-0.03220596503630.07362428671630.120663437028-0.0673591233024-0.2030066886530.141710533557-0.05950844150240.208669977804-0.01285202373610.01489603454470.197465935209-0.02999944492130.19830041172411.9036360367-26.4402258676-84.3417123185
162.781255651210.162257728251-0.6027674061751.794660025980.4940473325911.7095726341-0.1993796259980.1534112274970.135151615303-0.246542484560.2038709149360.120027973966-0.02345413261560.118803870444-0.03282133522980.223362183284-0.030238637587-0.01720315140440.322019490106-0.0107920317660.25592382301916.7488916728-32.5276847967-82.2470144615
171.976812743420.1606077737950.09264992528961.96736655397-0.04392733835732.53791462925-0.0157566226140.142801919191-0.213564560818-0.241983054846-0.0650700806284-0.02849377346870.01556026171320.1131146894540.004647764886160.255621082618-0.0245759945848-0.05286620983320.235647846676-0.07307785445890.2846729044265.60107534154-34.9578343906-90.0599901896
184.181320490750.2960588146320.4967413301574.096780858670.3925489904245.51372606311-0.1771409545820.474908010208-0.814468229239-0.250212603808-0.1227750704870.1747126902680.362051950566-0.2522831651260.2201727593780.253824209279-0.00199114538518-0.02192885410540.298995974947-0.05647469056250.365836133464.73670641826-41.5559440395-98.2552662875
192.80273012642-1.21099734912.451193322910.584275107681-1.324791494633.33892228409-0.639623449150.3870001870121.093531291290.217845959175-0.738915041560.425828011062-0.6787179357210.09618817935610.6606366149090.3723841463510.181482532974-0.1562679111590.629238024959-0.1608693718490.898037777338-8.20604437462-30.6297794813-79.2884803619
202.310853028570.677758012681-3.025794998282.15812486103-1.975145207354.77698169194-0.1661426874460.05313217963180.035428177207-0.06644747035550.2555081144750.3841218892620.5800002546010.0132859914548-0.09632479819610.294549891271-0.0149498702428-0.006718522143420.216804336104-0.02573498198190.320694323703-15.1628597771-45.2398957982-101.123818807
212.67469125925-0.63000264253-1.613336800721.647034427721.125822509243.73371290793-0.00597767533645-0.04415725487180.179409517696-0.123884355470.04954089576380.0129488417046-0.1215147899730.0721012386028-0.04033564638820.21815671272-0.00655737261413-0.0610531106380.138880564102-0.0260973673930.286356107588-10.9733189376-37.753944096-102.857724584
223.702520045970.741397577469-2.011252672162.703846291440.3417522942093.601110844390.507864847972-0.0394500210150.57263661449-0.4498264577280.113063457298-0.187480225601-0.6624264476180.819302305291-0.6251356057970.441440029311-0.04653514464420.05319501237710.388690184127-0.04801933590950.539786799426-6.4624838708-27.5372464145-104.912773255
Refinement TLS group

Refine-ID: X-RAY DIFFRACTION

IDRefine TLS-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11chain 'A' and (resid 76 through 93 )AA76 - 931 - 18
22chain 'A' and (resid 94 through 106 )AA94 - 10619 - 31
33chain 'A' and (resid 107 through 144 )AA107 - 14432 - 69
44chain 'A' and (resid 145 through 174 )AA145 - 17470 - 99
55chain 'A' and (resid 175 through 220 )AA175 - 220100 - 145
66chain 'A' and (resid 221 through 239 )AA221 - 239146 - 164
77chain 'A' and (resid 240 through 250 )AA240 - 250165 - 175
88chain 'B' and (resid 4 through 35 )BB4 - 351 - 8
99chain 'B' and (resid 36 through 73 )BB36 - 739 - 46
1010chain 'B' and (resid 74 through 148 )BB74 - 14847 - 121
1111chain 'B' and (resid 149 through 226 )BB149 - 226122 - 152
1212chain 'C' and (resid 76 through 93 )CC76 - 931 - 18
1313chain 'C' and (resid 94 through 106 )CC94 - 10619 - 31
1414chain 'C' and (resid 107 through 144 )CC107 - 14432 - 69
1515chain 'C' and (resid 145 through 191 )CC145 - 19170 - 116
1616chain 'C' and (resid 192 through 202 )CC192 - 202117 - 127
1717chain 'C' and (resid 203 through 232 )CC203 - 232128 - 157
1818chain 'C' and (resid 233 through 250 )CC233 - 250158 - 175
1919chain 'D' and (resid 6 through 33 )DD6 - 331 - 10
2020chain 'D' and (resid 34 through 69 )DD34 - 6911 - 46
2121chain 'D' and (resid 70 through 145 )DD70 - 14547 - 122
2222chain 'D' and (resid 146 through 226 )DD146 - 226123 - 156

+
About Yorodumi

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

EMDB accession codes are about to change! (news from PDBe EMDB page)

  • The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
  • The EM Navigator/Yorodumi systems omit the EMD- prefix.

Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator

External links:EMDB Accession Codes are Changing Soon! / Contact to PDBj

+
Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary.
  • This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software).
  • Now, EM Navigator and Yorodumi are based on the updated data.

External links:wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

-
Yorodumi

Thousand views of thousand structures

  • Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
  • This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
  • The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.

Related info.:EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Aug 31, 2016. New EM Navigator & Yorodumi / Yorodumi Papers / Jmol/JSmol / Function and homology information / Changes in new EM Navigator and Yorodumi

Read more