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Yorodumi- PDB-7npa: Crystal structure of the Coenzyme F420-dependent sulfite reductas... -
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-Basic information
Entry | Database: PDB / ID: 7npa | |||||||||
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Title | Crystal structure of the Coenzyme F420-dependent sulfite reductase from Methanothermococcus thermolithotrophicus at 1.55-A resolution | |||||||||
Components | Coenzyme F420-dependent sulfite reductase | |||||||||
Keywords | OXIDOREDUCTASE / Sulfite detoxification / Sulfur metabolism / sulfide / hydrogenotrophic methanogens / iron-sulfur cluster / sulfite-reductase evolution / sulfite/nitrite reductase / siroheme / flavin / ferredoxin / F420 / thermophile | |||||||||
Function / homology | Function and homology information 4 iron, 4 sulfur cluster binding / oxidoreductase activity / nucleotide binding / heme binding / metal ion binding Similarity search - Function | |||||||||
Biological species | Methanothermococcus thermolithotrophicus DSM 2095 (archaea) | |||||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.55 Å | |||||||||
Authors | Jespersen, M. / Wagner, T. | |||||||||
Funding support | Germany, 2items
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Citation | Journal: Nat.Chem.Biol. / Year: 2023 Title: Structures of the sulfite detoxifying F 420 -dependent enzyme from Methanococcales. Authors: Jespersen, M. / Pierik, A.J. / Wagner, T. #1: Journal: Biorxiv / Year: 2022 Title: The structure of the F420-dependent sulfite-detoxifying enzyme from Methanococcales reveals a prototypical sulfite-reductase with assimilatory traits Authors: Jespersen, M. / Pierik, A.J. / Wagner, T. | |||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 7npa.cif.gz | 4.2 MB | Display | PDBx/mmCIF format |
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PDB format | pdb7npa.ent.gz | 3.5 MB | Display | PDB format |
PDBx/mmJSON format | 7npa.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 7npa_validation.pdf.gz | 90.3 MB | Display | wwPDB validaton report |
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Full document | 7npa_full_validation.pdf.gz | 90.9 MB | Display | |
Data in XML | 7npa_validation.xml.gz | 465.3 KB | Display | |
Data in CIF | 7npa_validation.cif.gz | 689.5 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/np/7npa ftp://data.pdbj.org/pub/pdb/validation_reports/np/7npa | HTTPS FTP |
-Related structure data
Related structure data | 7np8SC S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data | Similarity search - Function & homologyF&H Search |
-Links
-Assembly
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Noncrystallographic symmetry (NCS) | NCS domain:
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