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Yorodumi- PDB-6oc6: Lanthanide-dependent methanol dehydrogenase XoxF from Methylobact... -
+Open data
-Basic information
Entry | Database: PDB / ID: 6oc6 | ||||||
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Title | Lanthanide-dependent methanol dehydrogenase XoxF from Methylobacterium extorquens, in complex with Lanthanum and Pyrroloquinoline quinone | ||||||
Components | Lanthanide-dependent methanol dehydrogenase XoxF | ||||||
Keywords | OXIDOREDUCTASE / XoxF / La / methanol / Pyrroloquinoline quinone / PQQ | ||||||
Function / homology | Function and homology information oxidoreductase activity, acting on CH-OH group of donors / outer membrane-bounded periplasmic space / calcium ion binding / membrane Similarity search - Function | ||||||
Biological species | Methylorubrum extorquens AM1 (bacteria) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / molecular replacement / Resolution: 2.89 Å | ||||||
Authors | Fellner, M. / Good, N.M. / Martinez-Gomez, N.C. / Hausinger, R.P. / Hu, J. | ||||||
Citation | Journal: J.Biol.Chem. / Year: 2020 Title: Lanthanide-dependent alcohol dehydrogenases require an essential aspartate residue for metal coordination and enzymatic function. Authors: Good, N.M. / Fellner, M. / Demirer, K. / Hu, J. / Hausinger, R.P. / Martinez-Gomez, N.C. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6oc6.cif.gz | 228.2 KB | Display | PDBx/mmCIF format |
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PDB format | pdb6oc6.ent.gz | 179 KB | Display | PDB format |
PDBx/mmJSON format | 6oc6.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 6oc6_validation.pdf.gz | 1.5 MB | Display | wwPDB validaton report |
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Full document | 6oc6_full_validation.pdf.gz | 1.5 MB | Display | |
Data in XML | 6oc6_validation.xml.gz | 40.5 KB | Display | |
Data in CIF | 6oc6_validation.cif.gz | 54.5 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/oc/6oc6 ftp://data.pdbj.org/pub/pdb/validation_reports/oc/6oc6 | HTTPS FTP |
-Related structure data
Related structure data | 6oc5SC S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
-Links
-Assembly
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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