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Open data
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Basic information
Entry | Database: PDB / ID: 6kvy | ||||||
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Title | The structure of EanB/T414A complex with hercynine | ||||||
![]() | Sulfurtransferase | ||||||
![]() | TRANSFERASE / mutant / complex / hercynine | ||||||
Function / homology | ![]() | ||||||
Biological species | ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Wu, L. / Liu, P.H. / Zhou, J.H. | ||||||
![]() | ![]() Title: The structure of EanB/T414A complex with hercynine Authors: Wu, L. / Liu, P.H. / Zhou, J.H. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 113.6 KB | Display | ![]() |
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PDB format | ![]() | 87.8 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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1 |
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Unit cell |
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Components
#1: Protein | Mass: 52236.180 Da / Num. of mol.: 1 / Mutation: T414A Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() | ||||
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#2: Chemical | ChemComp-AVJ / | ||||
#3: Chemical | ChemComp-MG / | ||||
#4: Chemical | #5: Water | ChemComp-HOH / | Has ligand of interest | Y | |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.82 Å3/Da / Density % sol: 56.39 % |
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Crystal grow | Temperature: 291 K / Method: vapor diffusion, sitting drop Details: 0.1 M MOPS/HEPES-Na pH 7.5, 0.02M of each monosacharide, 10% PEG20k, 20% PEG550 MME |
-Data collection
Diffraction | Mean temperature: 100 K / Serial crystal experiment: N |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: DECTRIS PILATUS3 S 6M / Detector: PIXEL / Date: Apr 13, 2019 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 0.979 Å / Relative weight: 1 |
Reflection | Resolution: 1.78→50 Å / Num. obs: 57234 / % possible obs: 100 % / Redundancy: 13.1 % / Rmerge(I) obs: 0.106 / Net I/σ(I): 24.5 |
Reflection shell | Resolution: 1.78→1.81 Å / Num. unique obs: 2804 / CC1/2: 0.886 |
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Processing
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Refinement | Method to determine structure: ![]()
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Refinement step | Cycle: LAST / Resolution: 1.78→26 Å
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