Entry | Database: PDB / ID: 6kma |
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Title | Crystal structure of SucA with glycolaldehyde-1-13C from Vibrio vulnificus |
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Components | Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component |
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Keywords | OXIDOREDUCTASE / DEHYDROGENASE |
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Function / homology | Function and homology information
oxoglutarate dehydrogenase (succinyl-transferring) / oxoglutarate dehydrogenase (succinyl-transferring) activity / thiamine pyrophosphate binding / tricarboxylic acid cycleSimilarity search - Function 2-oxoglutarate dehydrogenase E1 component, N-terminal domain / 2-oxoglutarate dehydrogenase N-terminus / Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal / Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily / 2-oxoglutarate dehydrogenase C-terminal / 2-oxoglutarate dehydrogenase E1 component / Dehydrogenase, E1 component / Dehydrogenase E1 component / Transketolase-like, pyrimidine-binding domain / Transketolase, pyrimidine binding domain ...2-oxoglutarate dehydrogenase E1 component, N-terminal domain / 2-oxoglutarate dehydrogenase N-terminus / Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal / Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily / 2-oxoglutarate dehydrogenase C-terminal / 2-oxoglutarate dehydrogenase E1 component / Dehydrogenase, E1 component / Dehydrogenase E1 component / Transketolase-like, pyrimidine-binding domain / Transketolase, pyrimidine binding domain / Transketolase, pyrimidine binding domain / Thiamin diphosphate-binding foldSimilarity search - Domain/homology |
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Biological species | Vibrio vulnificus (bacteria) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.282 Å |
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Authors | Seo, P.W. / Kim, J.S. |
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Funding support | Korea, Republic Of, 1items Organization | Grant number | Country |
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National Research Foundation (Korea) | | Korea, Republic Of |
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Citation | Journal: Catalysis Science And Technology / Year: 2020 Title: Understanding the molecular properties of the E1 subunit (SucA) of alpha-ketoglutarate dehydrogenase complex from Vibrio vulnificus for the enantioselective ligation of acetaldehydes into (R)-acetoin. Authors: Seo, P.W. / Jo, H.J. / Hwang, I.Y. / Jeong, H.Y. / Kim, J.H. / Kim, J.W. / Lee, E.Y. / Park, J.B. / Kim, J.S. |
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History | Deposition | Jul 31, 2019 | Deposition site: PDBJ / Processing site: PDBJ |
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Revision 1.0 | Aug 5, 2020 | Provider: repository / Type: Initial release |
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Revision 1.1 | Feb 24, 2021 | Group: Database references / Category: citation / citation_author Item: _citation.country / _citation.journal_abbrev ..._citation.country / _citation.journal_abbrev / _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.pdbx_database_id_DOI / _citation.title / _citation.year |
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Revision 1.2 | Nov 22, 2023 | Group: Data collection / Database references / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ncs_dom_lim Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id |
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