Entry | Database: PDB / ID: 6dmd |
---|
Title | ppGpp Riboswitch bound to ppGpp, manganese chloride structure |
---|
Components | ppGpp Riboswitch |
---|
Keywords | RNA / riboswitch / non-coding / yKKC |
---|
Function / homology | GUANOSINE-5',3'-TETRAPHOSPHATE / : / : / RNA / RNA (> 10) / RNA (> 100) Function and homology information |
---|
Biological species | Sulfobacillus acidophilus DSM 10332 (bacteria) |
---|
Method | X-RAY DIFFRACTION / SYNCHROTRON / Resolution: 2.65 Å |
---|
Authors | Peselis, A. / Serganov, A. |
---|
Funding support | United States, 3items Organization | Grant number | Country |
---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | R01GM112940 | United States | National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | F31GM119357 | United States | National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | T32GM88118 | United States |
|
---|
Citation | Journal: Nat. Chem. Biol. / Year: 2018 Title: ykkC riboswitches employ an add-on helix to adjust specificity for polyanionic ligands. Authors: Peselis, A. / Serganov, A. |
---|
History | Deposition | Jun 5, 2018 | Deposition site: RCSB / Processing site: RCSB |
---|
Revision 1.0 | Nov 14, 2018 | Provider: repository / Type: Initial release |
---|
Revision 1.1 | Jan 1, 2020 | Group: Advisory / Author supporting evidence / Category: pdbx_audit_support / pdbx_database_PDB_obs_spr / Item: _pdbx_audit_support.funding_organization |
---|
Revision 1.2 | Apr 27, 2022 | Group: Advisory / Database references ...Advisory / Database references / Derived calculations / Structure summary Category: chem_comp / database_2 ...chem_comp / database_2 / pdbx_database_PDB_obs_spr / pdbx_struct_conn_angle / struct_conn / struct_conn_type Item: _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI ..._chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr2_auth_seq_id / _pdbx_struct_conn_angle.ptnr2_label_asym_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.value / _struct_conn.conn_type_id / _struct_conn.id / _struct_conn.pdbx_dist_value / _struct_conn.pdbx_leaving_atom_flag / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_conn_type.id |
---|
Revision 1.3 | May 22, 2024 | Group: Data collection / Category: chem_comp_atom / chem_comp_bond |
---|
|
---|