登録情報 | データベース: PDB / ID: 6bux |
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タイトル | CRYSTAL STRUCTURE OF APOBEC3G CATALYTIC DOMAIN COMPLEX WITH SUBSTRATE SSDNA |
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要素 | - Apolipoprotein B mRNA editing enzyme catalytic subunit 3G catalytic domain
- DNA (5'-D(*AP*AP*TP*CP*CP*CP*AP*AP*A)-3')
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キーワード | HYDROLASE/DNA / HYDROLASE / ANTIVIRAL DEFENCE / DNA CYTIDINE DEAMINASE / HYDROLASE-DNA complex |
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機能・相同性 | 機能・相同性情報
apolipoprotein B mRNA editing enzyme complex / dCTP deaminase activity / cytidine deamination / base conversion or substitution editing / single-stranded DNA cytosine deaminase / DNA cytosine deamination / : / cytidine to uridine editing / cytidine deaminase activity / negative regulation of viral process ...apolipoprotein B mRNA editing enzyme complex / dCTP deaminase activity / cytidine deamination / base conversion or substitution editing / single-stranded DNA cytosine deaminase / DNA cytosine deamination / : / cytidine to uridine editing / cytidine deaminase activity / negative regulation of viral process / negative regulation of single stranded viral RNA replication via double stranded DNA intermediate / : / retrotransposon silencing / negative regulation of viral genome replication / APOBEC3G mediated resistance to HIV-1 infection / positive regulation of defense response to virus by host / Vif-mediated degradation of APOBEC3G / P-body / defense response to virus / ribonucleoprotein complex / innate immune response / RNA binding / zinc ion binding / identical protein binding / nucleus / cytoplasm / cytosol類似検索 - 分子機能 APOBEC-like C-terminal domain / Novel AID APOBEC clade 2 / APOBEC/CMP deaminase, zinc-binding / Cytidine and deoxycytidylate deaminases zinc-binding region signature. / Cytidine and deoxycytidylate deaminase domain / Cytidine and deoxycytidylate deaminases domain profile. / Cytidine deaminase-like類似検索 - ドメイン・相同性 |
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生物種 | Homo sapiens (ヒト) synthetic construct (人工物) |
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手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 1.856 Å |
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データ登録者 | Maiti, A. / Matsuo, H. |
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資金援助 | 米国, 1件 組織 | 認可番号 | 国 |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | R01GM118474 | 米国 |
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引用 | ジャーナル: Nat Commun / 年: 2018 タイトル: Crystal structure of the catalytic domain of HIV-1 restriction factor APOBEC3G in complex with ssDNA. 著者: Maiti, A. / Myint, W. / Kanai, T. / Delviks-Frankenberry, K. / Sierra Rodriguez, C. / Pathak, V.K. / Schiffer, C.A. / Matsuo, H. |
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履歴 | 登録 | 2017年12月11日 | 登録サイト: RCSB / 処理サイト: RCSB |
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改定 1.0 | 2018年7月18日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2020年1月1日 | Group: Author supporting evidence / カテゴリ: pdbx_audit_support / Item: _pdbx_audit_support.funding_organization |
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改定 1.2 | 2023年10月4日 | Group: Data collection / Database references / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession |
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