+Open data
-Basic information
Entry | Database: PDB / ID: 5znu | ||||||
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Title | Structure of omega conotoxin Bu8 | ||||||
Components | Omega-conotoxin-like Bu8 | ||||||
Keywords | TOXIN / Conotoxin | ||||||
Function / homology | Conotoxin, omega-type, conserved site / Omega-conotoxin family signature. / ion channel inhibitor activity / : / toxin activity / extracellular region / Omega-conotoxin-like Bu8 Function and homology information | ||||||
Biological species | Conus bullatus (invertebrata) | ||||||
Method | SOLUTION NMR / molecular dynamics | ||||||
Authors | Liu, X. / Jiang, L. | ||||||
Funding support | China, 1items
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Citation | Journal: To Be Published Title: Solution structure of omega conotoxin bu8 Authors: Liu, X. / Jiang, L. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 5znu.cif.gz | 129.3 KB | Display | PDBx/mmCIF format |
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PDB format | pdb5znu.ent.gz | 91.6 KB | Display | PDB format |
PDBx/mmJSON format | 5znu.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/zn/5znu ftp://data.pdbj.org/pub/pdb/validation_reports/zn/5znu | HTTPS FTP |
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-Related structure data
Similar structure data | |
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Other databases |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein/peptide | Mass: 2765.233 Da / Num. of mol.: 1 / Source method: obtained synthetically / Source: (synth.) Conus bullatus (invertebrata) / References: UniProt: P0CY66 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||
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NMR experiment |
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-Sample preparation
Details | Type: solution / Contents: 50 mM sodium phosphate, 90% H2O/10% D2O / Label: Natural Abundance / Solvent system: 90% H2O/10% D2O |
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Sample | Conc.: 50 mM / Component: sodium phosphate / Isotopic labeling: natural abundance |
Sample conditions | Ionic strength: 250 mM / Label: conditions_1 / pH: 3.5 / Pressure: 1 bar / Temperature: 298 K |
-NMR measurement
NMR spectrometer | Type: Bruker AVANCE III / Manufacturer: Bruker / Model: AVANCE III / Field strength: 850 MHz |
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-Processing
NMR software |
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Refinement | Method: molecular dynamics / Software ordinal: 1 | ||||||||||||
NMR representative | Selection criteria: lowest energy | ||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 200 / Conformers submitted total number: 20 |