+データを開く
-基本情報
登録情報 | データベース: PDB / ID: 5zhx | ||||||
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タイトル | Crystal structure of SmgGDS-558 and farnesylated RhoA complex | ||||||
要素 |
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キーワード | ONCOPROTEIN / armadillo GEF chaperone | ||||||
機能・相同性 | 機能・相同性情報 regulation of ERK5 cascade / CAAX-box protein maturation / angiotensin-activated signaling pathway involved in heart process / RHOT1 GTPase cycle / RHOT2 GTPase cycle / regulation of matrix metallopeptidase secretion / vascular associated smooth muscle contraction / myosin filament assembly / positive regulation of mitochondrial calcium ion concentration / negative regulation of endoplasmic reticulum calcium ion concentration ...regulation of ERK5 cascade / CAAX-box protein maturation / angiotensin-activated signaling pathway involved in heart process / RHOT1 GTPase cycle / RHOT2 GTPase cycle / regulation of matrix metallopeptidase secretion / vascular associated smooth muscle contraction / myosin filament assembly / positive regulation of mitochondrial calcium ion concentration / negative regulation of endoplasmic reticulum calcium ion concentration / alpha-beta T cell lineage commitment / aortic valve formation / mitotic cleavage furrow formation / positive regulation of lipase activity / bone trabecula morphogenesis / endothelial tube lumen extension / skeletal muscle satellite cell migration / regulation of osteoblast proliferation / positive regulation of vascular associated smooth muscle contraction / angiotensin-mediated vasoconstriction involved in regulation of systemic arterial blood pressure / SLIT2:ROBO1 increases RHOA activity / RHO GTPases Activate Rhotekin and Rhophilins / Roundabout signaling pathway / negative regulation of intracellular steroid hormone receptor signaling pathway / Axonal growth inhibition (RHOA activation) / Axonal growth stimulation / regulation of neural precursor cell proliferation / cleavage furrow formation / regulation of modification of postsynaptic actin cytoskeleton / forebrain radial glial cell differentiation / cell junction assembly / apical junction assembly / cellular response to chemokine / negative regulation of cell migration involved in sprouting angiogenesis / regulation of systemic arterial blood pressure by endothelin / beta selection / establishment of epithelial cell apical/basal polarity / negative regulation of cell size / RHO GTPases Activate ROCKs / regulation of modification of postsynaptic structure / negative regulation of oxidative phosphorylation / negative regulation of motor neuron apoptotic process / cardiac muscle hypertrophy / RHO GTPases activate CIT / Sema4D induced cell migration and growth-cone collapse / RHO GTPases activate KTN1 / odontogenesis / regulation of mitochondrion organization / PCP/CE pathway / apolipoprotein A-I-mediated signaling pathway / positive regulation of podosome assembly / negative regulation of cell-substrate adhesion / positive regulation of alpha-beta T cell differentiation / positive regulation of leukocyte adhesion to vascular endothelial cell / Sema4D mediated inhibition of cell attachment and migration / ossification involved in bone maturation / Wnt signaling pathway, planar cell polarity pathway / motor neuron apoptotic process / PI3K/AKT activation / wound healing, spreading of cells / apical junction complex / regulation of focal adhesion assembly / negative chemotaxis / EPHA-mediated growth cone collapse / myosin binding / stress fiber assembly / positive regulation of cytokinesis / regulation of neuron projection development / RHOC GTPase cycle / cellular response to cytokine stimulus / androgen receptor signaling pathway / cerebral cortex cell migration / ERBB2 Regulates Cell Motility / cleavage furrow / semaphorin-plexin signaling pathway / Rho protein signal transduction / ficolin-1-rich granule membrane / protein localization to nucleus / endothelial cell migration / mitotic spindle assembly / RHOA GTPase cycle / positive regulation of T cell migration / regulation of microtubule cytoskeleton organization / PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases / negative regulation of reactive oxygen species biosynthetic process / cytoplasmic microtubule organization / skeletal muscle tissue development / RHO GTPases activate PKNs / positive regulation of stress fiber assembly / GPVI-mediated activation cascade / substantia nigra development / EPHB-mediated forward signaling / positive regulation of neuron differentiation / regulation of cell migration / cell-matrix adhesion / substrate adhesion-dependent cell spreading / guanyl-nucleotide exchange factor activity / kidney development / small monomeric GTPase / secretory granule membrane 類似検索 - 分子機能 | ||||||
生物種 | Homo sapiens (ヒト) | ||||||
手法 | X線回折 / シンクロトロン / 解像度: 3.5 Å | ||||||
データ登録者 | Shimizu, H. / Toma-Fukai, S. / Shimizu, T. | ||||||
引用 | ジャーナル: Proc. Natl. Acad. Sci. U.S.A. / 年: 2018 タイトル: GEF mechanism revealed by the structure of SmgGDS-558 and farnesylated RhoA complex and its implication for a chaperone mechanism. 著者: Shimizu, H. / Toma-Fukai, S. / Kontani, K. / Katada, T. / Shimizu, T. | ||||||
履歴 |
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-構造の表示
構造ビューア | 分子: MolmilJmol/JSmol |
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-ダウンロードとリンク
-ダウンロード
PDBx/mmCIF形式 | 5zhx.cif.gz | 474.8 KB | 表示 | PDBx/mmCIF形式 |
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PDB形式 | pdb5zhx.ent.gz | 382.7 KB | 表示 | PDB形式 |
PDBx/mmJSON形式 | 5zhx.json.gz | ツリー表示 | PDBx/mmJSON形式 | |
その他 | その他のダウンロード |
-検証レポート
文書・要旨 | 5zhx_validation.pdf.gz | 506.8 KB | 表示 | wwPDB検証レポート |
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文書・詳細版 | 5zhx_full_validation.pdf.gz | 545.9 KB | 表示 | |
XML形式データ | 5zhx_validation.xml.gz | 83.9 KB | 表示 | |
CIF形式データ | 5zhx_validation.cif.gz | 113.3 KB | 表示 | |
アーカイブディレクトリ | https://data.pdbj.org/pub/pdb/validation_reports/zh/5zhx ftp://data.pdbj.org/pub/pdb/validation_reports/zh/5zhx | HTTPS FTP |
-関連構造データ
-リンク
-集合体
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非結晶学的対称性 (NCS) | NCSドメイン:
NCSドメイン領域: Component-ID: _ / Refine code: _
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