Entry | Database: PDB / ID: 5z0t |
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Title | Thermoactinomyces vulgaris R-47 alpha-amylase I (TVA I) mutant A357V/Q359N/Y360E (AQY/VNE) |
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Components | Neopullulanase 1 |
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Keywords | HYDROLASE / alpha-amylase / neopullulanase / GH13 |
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Function / homology | Function and homology information
neopullulanase / neopullulanase activity / carbohydrate metabolic process / extracellular region / metal ion bindingSimilarity search - Function Glycoside hydrolase, family 13, N-terminal Ig-like domain / Alpha amylase, N-terminal ig-like domain / Alpha amylase, catalytic domain / Glycosyl hydrolase, family 13, catalytic domain / Alpha-amylase domain / Golgi alpha-mannosidase II / Glycosyl hydrolase, all-beta / Glycosidases / Immunoglobulin E-set / Glycoside hydrolase superfamily ...Glycoside hydrolase, family 13, N-terminal Ig-like domain / Alpha amylase, N-terminal ig-like domain / Alpha amylase, catalytic domain / Glycosyl hydrolase, family 13, catalytic domain / Alpha-amylase domain / Golgi alpha-mannosidase II / Glycosyl hydrolase, all-beta / Glycosidases / Immunoglobulin E-set / Glycoside hydrolase superfamily / Immunoglobulins / TIM Barrel / Alpha-Beta Barrel / Immunoglobulin-like fold / Immunoglobulin-like / Sandwich / Mainly Beta / Alpha BetaSimilarity search - Domain/homology |
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Biological species | Thermoactinomyces vulgaris (bacteria) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.5 Å |
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Authors | Tonozuka, T. |
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Funding support | Japan, 1items Organization | Grant number | Country |
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Japan Society for the Promotion of Science | 16K07687 | Japan |
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Citation | Journal: Amylase / Year: 2018 Title: Mutagenesis-induced conformational change in domain B of a pullulan-hydrolyzing alpha-amylase TVA I Authors: Tonozuka, T. / Nihira, T. / Mizuno, M. / Nishikawa, A. / Kamitori, S. |
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History | Deposition | Dec 21, 2017 | Deposition site: PDBJ / Processing site: PDBJ |
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Revision 1.0 | Feb 21, 2018 | Provider: repository / Type: Initial release |
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Revision 1.1 | Mar 28, 2018 | Group: Data collection / Database references / Category: citation Item: _citation.journal_volume / _citation.page_first ..._citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_DOI |
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Revision 1.2 | Nov 22, 2023 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_conn Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.pdbx_dist_value / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id |
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