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- PDB-5x2b: Crystal structure of mouse sulfotransferase SULT7A1 complexed with PAP -
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Open data
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Basic information
Entry | Database: PDB / ID: 5x2b | ||||||
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Title | Crystal structure of mouse sulfotransferase SULT7A1 complexed with PAP | ||||||
![]() | (Sulfotransferase![]() | ||||||
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Function / homology | ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Kanekiyo, M. / Teramoto, T. / Kakuta, Y. | ||||||
![]() | ![]() Title: Crystal structure of mouse sulfotransferase SULT7A1 complexed with PAP Authors: Tanaka, S. / Kakuta, Y. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 1.1 MB | Display | ![]() |
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PDB format | ![]() | 875.3 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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12 | ![]()
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Unit cell |
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Components
-Protein , 3 types, 12 molecules CABEIKLDFGHJ
#1: Protein | ![]() Mass: 32664.318 Da / Num. of mol.: 7 / Fragment: UNP residues 7-287 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() References: UniProt: B7ZWN4, ![]() #2: Protein | | ![]() Mass: 32480.127 Da / Num. of mol.: 1 / Fragment: UNP residues 10-287 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() References: UniProt: B7ZWN4, ![]() #3: Protein | ![]() Mass: 32593.240 Da / Num. of mol.: 4 / Fragment: UNP residues 7-287 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() References: UniProt: B7ZWN4, ![]() |
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-Non-polymers , 4 types, 1713 molecules ![](data/chem/img/A3P.gif)
![](data/chem/img/CA.gif)
![](data/chem/img/GOL.gif)
![](data/chem/img/HOH.gif)
![](data/chem/img/CA.gif)
![](data/chem/img/GOL.gif)
![](data/chem/img/HOH.gif)
#4: Chemical | ChemComp-A3P / ![]() #5: Chemical | ChemComp-CA / #6: Chemical | ![]() #7: Water | ChemComp-HOH / | ![]() |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.48 Å3/Da / Density % sol: 50.38 % |
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Crystal grow![]() | Temperature: 294.5 K / Method: vapor diffusion, hanging drop / Details: PEG |
-Data collection
Diffraction | Mean temperature: 100 K | |||||||||||||||
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Diffraction source | Source: ![]() ![]() ![]() | |||||||||||||||
Detector | Type: ADSC QUANTUM 210 / Detector: CCD / Date: Dec 1, 2011 | |||||||||||||||
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray | |||||||||||||||
Radiation wavelength | Wavelength![]() | |||||||||||||||
Reflection twin |
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Reflection | Resolution: 2.08→50 Å / Num. obs: 229447 / % possible obs: 99.8 % / Redundancy: 3.7 % / Rsym value: 0.085 / Net I/σ(I): 16.8 |
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Processing
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Refinement | Method to determine structure![]() ![]()
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Solvent computation | Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.4 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | Biso mean: 33.903 Å2
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Refinement step | Cycle: 1 / Resolution: 2.08→50 Å
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Refine LS restraints |
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