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- PDB-5whu: Crystal structure of 3'SL bound ArtB -

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Basic information

Entry
Database: PDB / ID: 5whu
TitleCrystal structure of 3'SL bound ArtB
ComponentsArtB protein
KeywordsTOXIN / bacterial toxin / glycan
Function / homologyOB fold (Dihydrolipoamide Acetyltransferase, E2P) - #110 / Enterotoxin / OB fold (Dihydrolipoamide Acetyltransferase, E2P) / Beta Barrel / Mainly Beta / 3'-sialyl-alpha-lactose / DI(HYDROXYETHYL)ETHER / N-acetyl-alpha-neuraminic acid / ArtB protein
Function and homology information
Biological speciesSalmonella enterica subsp. enterica serovar Typhimurium str. DT104 (bacteria)
MethodX-RAY DIFFRACTION / MOLECULAR REPLACEMENT / Resolution: 2.2 Å
AuthorsGao, X. / Galan, J.E.
CitationJournal: Nat Microbiol / Year: 2017
Title: Evolution of host adaptation in the Salmonella typhoid toxin.
Authors: Gao, X. / Deng, L. / Stack, G. / Yu, H. / Chen, X. / Naito-Matsui, Y. / Varki, A. / Galan, J.E.
History
DepositionJul 18, 2017Deposition site: RCSB / Processing site: RCSB
Revision 1.0Oct 25, 2017Provider: repository / Type: Initial release
Revision 1.1Dec 6, 2017Group: Database references / Category: citation
Item: _citation.journal_volume / _citation.page_first / _citation.page_last
Revision 1.2Jun 24, 2020Group: Data collection / Derived calculations / Category: chem_comp / pdbx_struct_conn_angle / struct_conn / Item: _chem_comp.type
Revision 2.0Jul 29, 2020Group: Atomic model / Data collection ...Atomic model / Data collection / Derived calculations / Structure summary
Category: atom_site / chem_comp ...atom_site / chem_comp / entity / entity_name_com / pdbx_branch_scheme / pdbx_chem_comp_identifier / pdbx_entity_branch / pdbx_entity_branch_descriptor / pdbx_entity_branch_link / pdbx_entity_branch_list / pdbx_entity_nonpoly / pdbx_molecule_features / pdbx_nonpoly_scheme / pdbx_struct_assembly_gen / pdbx_struct_conn_angle / pdbx_struct_special_symmetry / struct_asym / struct_conn / struct_conn_type / struct_site / struct_site_gen
Item: _atom_site.B_iso_or_equiv / _atom_site.Cartn_x ..._atom_site.B_iso_or_equiv / _atom_site.Cartn_x / _atom_site.Cartn_y / _atom_site.Cartn_z / _atom_site.auth_asym_id / _atom_site.auth_atom_id / _atom_site.auth_comp_id / _atom_site.auth_seq_id / _atom_site.label_asym_id / _atom_site.label_atom_id / _atom_site.label_comp_id / _atom_site.label_entity_id / _atom_site.type_symbol / _chem_comp.name / _entity.formula_weight / _entity.pdbx_description / _entity.pdbx_number_of_molecules / _entity.src_method / _entity.type / _pdbx_struct_assembly_gen.asym_id_list / _pdbx_struct_conn_angle.ptnr1_auth_asym_id / _pdbx_struct_conn_angle.ptnr1_auth_comp_id / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_asym_id / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr1_label_comp_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr2_auth_asym_id / _pdbx_struct_conn_angle.ptnr2_auth_seq_id / _pdbx_struct_conn_angle.ptnr2_label_asym_id / _pdbx_struct_conn_angle.ptnr3_auth_asym_id / _pdbx_struct_conn_angle.ptnr3_auth_comp_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_asym_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.ptnr3_label_comp_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.value / _pdbx_struct_special_symmetry.label_asym_id / _struct_conn.conn_type_id / _struct_conn.id / _struct_conn.pdbx_dist_value / _struct_conn.pdbx_leaving_atom_flag / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn_type.id
Description: Carbohydrate remediation / Provider: repository / Type: Remediation
Revision 2.1Oct 4, 2023Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description / Structure summary
Category: chem_comp / chem_comp_atom ...chem_comp / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_conn
Item: _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI ..._chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.pdbx_leaving_atom_flag

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: ArtB protein
B: ArtB protein
C: ArtB protein
D: ArtB protein
E: ArtB protein
F: ArtB protein
G: ArtB protein
H: ArtB protein
I: ArtB protein
J: ArtB protein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)178,41070
Polymers169,10010
Non-polymers9,31060
Water8,593477
1
A: ArtB protein
B: ArtB protein
C: ArtB protein
D: ArtB protein
E: ArtB protein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)89,12429
Polymers84,5505
Non-polymers4,57424
Water905
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area18130 Å2
ΔGint-126 kcal/mol
Surface area24250 Å2
MethodPISA
2
F: ArtB protein
G: ArtB protein
H: ArtB protein
I: ArtB protein
J: ArtB protein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)89,28641
Polymers84,5505
Non-polymers4,73636
Water905
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area19460 Å2
ΔGint-191 kcal/mol
Surface area24130 Å2
MethodPISA
Unit cell
Length a, b, c (Å)137.915, 94.213, 123.964
Angle α, β, γ (deg.)90.00, 102.60, 90.00
Int Tables number5
Space group name H-MC121
Components on special symmetry positions
IDModelComponents
11B-342-

HOH

21H-348-

HOH

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Components

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Protein , 1 types, 10 molecules ABCDEFGHIJ

#1: Protein
ArtB protein / Subtilase cytotoxin subunit B-like protein


Mass: 16910.010 Da / Num. of mol.: 10
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Salmonella enterica subsp. enterica serovar Typhimurium str. DT104 (bacteria)
Gene: ArtB, ERS157243_04891 / Production host: Escherichia coli BL21(DE3) (bacteria) / References: UniProt: Q404H3

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Sugars , 3 types, 10 molecules

#2: Polysaccharide N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose


Type: oligosaccharide / Mass: 471.411 Da / Num. of mol.: 3
Source method: isolated from a genetically manipulated source
DescriptorTypeProgram
DNeup5Aca2-3DGalpb1-ROHGlycam Condensed SequenceGMML 1.0
WURCS=2.0/2,2,1/[a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2/a3-b2WURCSPDB2Glycan 1.1.0
[][b-D-Galp]{[(3+2)][a-D-Neup5Ac]{}}LINUCSPDB-CARE
#3: Polysaccharide
N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose / 3'-sialyl-alpha-lactose


Type: oligosaccharide, Oligosaccharide / Class: Nutrient / Mass: 633.552 Da / Num. of mol.: 6
Source method: isolated from a genetically manipulated source
Details: oligosaccharide / References: 3'-sialyl-alpha-lactose
DescriptorTypeProgram
DNeup5Aca2-3DGalpb1-4DGlcpa1-ROHGlycam Condensed SequenceGMML 1.0
WURCS=2.0/3,3,2/[a2122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3/a4-b1_b3-c2WURCSPDB2Glycan 1.1.0
[][a-D-Glcp]{[(4+1)][b-D-Galp]{[(3+2)][a-D-Neup5Ac]{}}}LINUCSPDB-CARE
#4: Sugar ChemComp-SIA / N-acetyl-alpha-neuraminic acid / N-acetylneuraminic acid / sialic acid / alpha-sialic acid / O-SIALIC ACID


Type: D-saccharide, alpha linking / Mass: 309.270 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C11H19NO9
IdentifierTypeProgram
DNeup5AcaCONDENSED IUPAC CARBOHYDRATE SYMBOLGMML 1.0
N-acetyl-a-D-neuraminic acidCOMMON NAMEGMML 1.0
a-D-Neup5AcIUPAC CARBOHYDRATE SYMBOLPDB-CARE 1.0
Neu5AcSNFG CARBOHYDRATE SYMBOLGMML 1.0

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Non-polymers , 6 types, 527 molecules

#5: Chemical
ChemComp-PEG / DI(HYDROXYETHYL)ETHER


Mass: 106.120 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: C4H10O3
#6: Chemical...
ChemComp-CL / CHLORIDE ION


Mass: 35.453 Da / Num. of mol.: 23 / Source method: obtained synthetically / Formula: Cl
#7: Chemical
ChemComp-MES / 2-(N-MORPHOLINO)-ETHANESULFONIC ACID


Mass: 195.237 Da / Num. of mol.: 6 / Source method: obtained synthetically / Formula: C6H13NO4S / Comment: pH buffer*YM
#8: Chemical ChemComp-TRS / 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / TRIS BUFFER


Mass: 122.143 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: C4H12NO3 / Comment: pH buffer*YM
#9: Chemical
ChemComp-CA / CALCIUM ION


Mass: 40.078 Da / Num. of mol.: 7 / Source method: obtained synthetically / Formula: Ca
#10: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 477 / Source method: isolated from a natural source / Formula: H2O

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.47 Å3/Da / Density % sol: 50.25 %
Crystal growTemperature: 297 K / Method: vapor diffusion, hanging drop / pH: 5.5 / Details: PEG 200, calcium chloride

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Data collection

DiffractionMean temperature: 100 K
Diffraction sourceSource: ROTATING ANODE / Type: RIGAKU / Wavelength: 1.5418 Å
DetectorType: RIGAKU SATURN 944 / Detector: CCD / Date: Feb 18, 2015
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1.5418 Å / Relative weight: 1
ReflectionResolution: 2.2→50 Å / Num. obs: 77088 / % possible obs: 98.02 % / Redundancy: 3.1 % / Net I/σ(I): 8.5

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Processing

Software
NameVersionClassification
PHENIX1.8.1_1168refinement
HKL-2000data collection
HKL-2000data scaling
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: 4RHR
Resolution: 2.2→50 Å / SU ML: 0.26 / Cross valid method: FREE R-VALUE / σ(F): 1.33 / Phase error: 25.54
RfactorNum. reflection% reflection
Rfree0.2302 3848 5.01 %
Rwork0.1738 --
obs0.1767 76839 97.7 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å
Refinement stepCycle: LAST / Resolution: 2.2→50 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms9505 0 577 477 10559
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.00710327
X-RAY DIFFRACTIONf_angle_d1.10913974
X-RAY DIFFRACTIONf_dihedral_angle_d18.1413679
X-RAY DIFFRACTIONf_chiral_restr0.0711537
X-RAY DIFFRACTIONf_plane_restr0.0041747
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.2-2.22790.27661230.23682570X-RAY DIFFRACTION94
2.2279-2.25720.29311400.22852612X-RAY DIFFRACTION94
2.2572-2.28810.28361270.22592615X-RAY DIFFRACTION95
2.2881-2.32080.28061310.22492662X-RAY DIFFRACTION95
2.3208-2.35540.29971340.21742632X-RAY DIFFRACTION95
2.3554-2.39220.30591430.21172642X-RAY DIFFRACTION96
2.3922-2.43150.26541330.21422646X-RAY DIFFRACTION97
2.4315-2.47340.28941400.2142696X-RAY DIFFRACTION97
2.4734-2.51840.2951250.21012694X-RAY DIFFRACTION98
2.5184-2.56680.30181360.21512674X-RAY DIFFRACTION97
2.5668-2.61920.3071570.21062719X-RAY DIFFRACTION98
2.6192-2.67610.26471490.19022687X-RAY DIFFRACTION98
2.6761-2.73840.26341380.19332681X-RAY DIFFRACTION98
2.7384-2.80690.25871540.19432700X-RAY DIFFRACTION98
2.8069-2.88280.27641570.20562729X-RAY DIFFRACTION98
2.8828-2.96760.29371400.1982698X-RAY DIFFRACTION98
2.9676-3.06340.26711410.19342682X-RAY DIFFRACTION98
3.0634-3.17290.25311430.18682741X-RAY DIFFRACTION98
3.1729-3.29990.26561490.18162694X-RAY DIFFRACTION98
3.2999-3.45010.2111450.16782745X-RAY DIFFRACTION99
3.4501-3.6320.20041320.15062796X-RAY DIFFRACTION99
3.632-3.85950.16831640.13412715X-RAY DIFFRACTION100
3.8595-4.15740.19221520.13982762X-RAY DIFFRACTION99
4.1574-4.57570.1441420.11372762X-RAY DIFFRACTION100
4.5757-5.23760.16491560.12112801X-RAY DIFFRACTION100
5.2376-6.59780.20991510.16672781X-RAY DIFFRACTION100
6.5978-65.18570.19551460.16492855X-RAY DIFFRACTION99
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
15.25732.84711.50016.97620.86891.8150.1103-0.1284-0.439-0.107-0.0245-0.0654-0.12830.2134-0.12150.31640.03410.01670.1747-0.0110.1142116.2632-227.8296280.9708
21.682-0.3701-0.87090.14160.25452.81220.12030.0794-0.1776-0.02650.1111-0.23070.33860.2547-0.23410.17710.0541-0.0210.1345-0.00120.1526125.5804-223.9407263.2898
31.62840.58710.04473.04550.76781.57960.0978-0.2949-0.26090.35710.0533-0.54210.22760.2586-0.17430.20890.0587-0.04920.19540.01640.1704123.2878-225.939271.5926
40.707-0.17180.26661.95391.1210.84570.10470.10170.0077-0.27230.1239-0.1173-0.22280.0393-0.20550.17210.00310.02660.1360.01620.0896116.2492-216.7291266.8943
53.13410.445-0.44673.08890.012.339-0.0068-0.47190.12670.19930.0819-0.18920.41770.0734-0.05090.18490.0549-0.01490.1875-0.00870.0973118.1188-221.5209277.9369
63.07622.038-1.66661.85310.08333.72-0.1376-0.3446-0.56410.05520.067-0.17330.40290.45550.02290.20480.1250.01470.30250.0670.1889130.1315-231.8151268.471
73.8238-1.3445-0.04973.94451.31912.28190.0199-0.43470.01820.3335-0.0755-0.1272-0.23280.09230.06830.2570.00820.03750.16630.01180.0963113.5557-221.7887281.6223
83.5123-0.9354-2.10171.14390.39253.3269-0.05610.58030.2734-0.2563-0.1722-0.0423-0.2021-0.13630.12520.3353-0.06290.01330.24380.08210.1597120.4466-202.7119235.5414
94.60641.1444-1.73083.9268-1.13242.2075-0.09280.2010.44940.09780.05240.3747-0.5254-0.2272-0.0050.20240.0548-0.01010.13440.01220.1383101.491-204.4794244.7212
106.15341.4008-0.58912.3944-1.75171.3174-0.07810.29030.1413-0.59750.12250.10580.0311-0.0791-0.07190.2507-0.0026-0.00940.17580.03830.0973102.0082-208.1145241.6515
111.12550.51070.38671.2897-1.18621.8807-0.18340.12980.3284-0.10490.03650.2606-0.23740.0333-0.14060.7717-0.2125-0.24510.2860.31480.7479111.684-190.2905240.0463
121.94690.55130.28041.95550.36060.83730.01840.18560.2315-0.13590.08310.0705-0.16060.124-0.07240.2107-0.01970.030.09210.00920.1518111.4568-206.7039244.2026
133.41860.4845-2.22480.7755-0.59983.3328-0.06430.50950.2128-0.3899-0.0240.0924-0.1375-0.3760.01780.3244-0.0764-0.03030.50990.1530.2402104.7933-206.2998230.7248
147.44060.35040.18814.1277-1.36230.4681-0.14940.64840.1807-0.57680.16640.0997-0.0043-0.03170.05760.2536-0.0278-0.03530.3560.14610.207599.898-202.576234.0997
151.465-1.6506-0.5362.30160.07572.9613-0.09630.33190.6492-0.24470.1023-0.3918-0.75250.4659-0.04420.2712-0.06620.02470.20340.04760.2186122.9004-200.9449242.4694
162.11151.1295-0.98085.6611.50631.64270.0706-0.1395-0.02980.05370.0837-0.7961-0.05990.6003-0.1260.12750.04010.01080.3883-0.01560.2783136.7996-219.9158257.5006
172.5934-0.14420.58820.5789-1.0652.8535-0.01150.3947-0.1496-0.33170.1465-0.2548-0.15080.2157-0.07760.2256-0.04150.05490.2414-0.00430.1151122.9807-212.287244.4815
180.8202-0.06040.37393.02711.21652.3665-0.1372-0.0417-0.1378-0.34280.1847-0.5484-0.22080.6622-0.05910.2271-0.05430.04950.25120.00330.1634130.2594-214.8575248.9613
190.88591.86410.78433.94571.66120.70.0206-0.20860.1295-0.0532-0.19840.1025-0.2875-0.06970.15210.2293-0.02220.00390.1384-0.0070.1231120.7464-211.9447256.5646
204.2776-2.5026-1.02871.8873-0.12091.5017-0.01890.02850.20330.08570.1421-0.3681-0.16520.397-0.14150.1998-0.1219-0.01080.29240.01480.1596132.6727-213.9594257.8706
210.5072-0.14761.31473.4259-1.49433.83670.03220.1557-0.0693-0.1106-0.0878-0.23560.15210.51350.06950.2185-0.03830.0790.2991-0.00080.1736131.6015-215.7439239.5512
221.8705-1.8321-1.96123.87890.42323.1383-0.1621-0.46670.15160.48650.1836-0.3070.00660.8171-0.07770.1727-0.02710.00940.4022-0.00830.1848134.0543-216.2331262.794
234.15682.61031.94586.3173.47365.3240.111-0.274-0.28630.4318-0.07080.47220.1684-0.76410.07480.15030.01840.05820.21020.03460.193987.2917-216.5928273.2975
243.1747-1.2401-0.45910.5526-0.1812.0261-0.047-0.0916-0.11750.1278-0.060.10680.0633-0.07950.08790.24050.02690.02620.09490.0130.1083105.888-224.7852273.3314
250.81910.01330.90366.74034.80344.8040.175-0.00680.02020.5531-0.14710.23010.3388-0.15140.02890.3710.10450.09310.3936-0.12040.190297.0179-213.3236285.5092
261.4593-0.29471.06140.083-0.31861.2469-0.0352-0.175-0.24920.21280.0740.00580.1393-0.1863-0.02110.37680.0177-0.00740.13360.0270.155798.3782-227.2924268.4651
270.20660.29570.28740.93261.12041.3967-0.026-0.05170.0631-0.34380.1199-0.1425-0.16810.0091-0.09130.23380.03180.00080.0808-0.00340.165104.0924-214.2136267.4637
281.306-0.82830.81822.4439-0.29970.5449-0.1371-0.3519-0.13990.37630.19630.33120.0091-0.3774-0.04440.28190.0450.05890.20910.02730.143696.9901-223.8436277.157
294.29931.77360.18885.1406-0.79211.7481-0.0969-0.29560.57560.4121-0.02740.4704-0.5365-0.34070.15120.25780.1105-0.00430.25940.00040.192189.9951-210.112271.5976
301.8361-0.4569-1.00182.98072.71483.9629-0.01590.44010.4899-0.17360.1330.0778-0.2633-0.463-0.0790.26430.024-0.08780.27610.08860.289489.9273-201.12245.0141
311.3108-0.58-0.66223.658-1.87441.7222-0.1562-0.04290.0043-0.10570.21120.49630.0664-0.1788-0.04360.11660.0217-0.03390.15520.01440.171791.0625-214.1263260.8126
325.18885.42860.62076.85923.67587.83660.07920.0140.6056-0.4374-0.15761.1974-0.5317-0.60020.11410.26610.0898-0.08150.2534-0.07360.447685.7948-195.8036259.4145
330.6157-0.4552-0.78551.95210.17031.4547-0.04030.0350.0229-0.12320.08070.0150.0204-0.2072-0.04060.1262-0.0161-0.04970.11840.00140.149796.1557-211.6643254.6861
341.51080.5877-0.45241.6173-1.23712.23410.15380.0740.4305-0.12420.16960.6078-0.0468-0.5799-0.21810.2130.0608-0.03290.26170.03070.269988.5159-205.7662252.0218
353.62930.6402-2.985.6664-2.31243.02340.01350.0718-0.0368-0.35050.17480.55580.1992-0.5698-0.09330.12780.0125-0.03610.28760.02930.190681.4464-213.3378259.9501
362.75810.06430.29680.0061-0.06681.97770.06960.18350.7923-0.2530.08840.2882-0.8506-0.2247-0.03580.45890.08110.00460.20270.07580.351895.3345-197.3939246.7975
370.8027-0.26911.1511.4452-0.29191.71260.15540.2786-0.0999-0.3109-0.0854-0.0960.14680.3327-0.080.24820.01660.06030.1819-0.05330.1713116.0467-185.8147269.5162
382.33331.2581-0.30420.7099-0.21760.13620.00820.232-0.2216-0.40460.1898-0.3805-0.03130.1914-0.12860.3769-0.02960.05990.1899-0.13720.4497106.0044-197.2011266.521
391.14840.46950.49571.3529-0.24280.3876-0.03740.1394-0.0661-0.1944-0.0441-0.1112-0.02040.04840.12560.15410.0110.02030.1247-0.04270.135115.4519-181.4121273.1218
401.9301-0.7186-0.06091.64590.8153.0204-0.16130.1276-0.1432-0.45950.17720.0262-0.0764-0.0593-0.03940.2727-0.0201-0.0410.1117-0.03790.1366105.8463-184.733266.7303
411.2661-0.02641.55392.8642-1.2222.66130.21260.5624-0.3914-0.3524-0.0858-0.35060.3180.8653-0.16060.37110.12690.11540.3046-0.0730.3422123.4025-190.7687264.4638
422.6821-0.6646-0.74991.4079-0.48763.82940.11240.3321-0.3786-0.5176-0.04570.3223-0.1155-0.463-0.05110.26060.0327-0.06170.1936-0.05370.1872101.7571-181.3879265.089
434.1956-1.40760.76452.04170.58023.25990.0685-0.22590.04650.34140.1894-0.26910.0420.1237-0.24130.2124-0.0049-0.10010.19270.05030.2603125.7546-183.6092308.7127
441.3098-0.8042-0.02622.5794-0.70182.91520.0128-0.19590.05690.2392-0.0974-0.1293-0.2940.17240.06810.2098-0.0121-0.01480.1728-0.03580.0726116.4731-166.5391302.3817
450.71781.60520.58255.02821.52430.50710.2192-1.2847-0.14231.1026-0.5434-0.3190.1769-0.1760.12130.4612-0.1877-0.12050.83840.22470.3909112.1701-179.6545315.4278
461.7484-1.50670.39361.79160.66412.1369-0.1922-0.07750.1550.33560.1002-0.2447-0.13930.12290.06420.1644-0.04170.00060.11980.00730.1362125.1178-169.318301.1965
472.50721.0451-1.01010.6708-0.27590.77060.16770.0966-0.11860.10130.0570.096-0.1178-0.1387-0.21890.12310.0087-0.01280.10310.03860.1194113.9555-177.0991296.542
480.9461-0.77581.11213.0310.19023.60040.1057-0.143-0.10830.5296-0.05460.18530.1033-0.08830.00530.1558-0.0157-0.01620.11120.05760.2036118.6513-182.6444306.292
496.7488-1.32370.17383.3340.74012.303-0.0384-0.52440.08020.48220.2183-0.4669-0.16520.1504-0.18450.3353-0.0422-0.09090.2093-0.0370.1439122.3047-165.0553311.015
501.95220.5959-0.24062.22580.39011.7870.1654-0.1536-0.1338-0.05250.2794-0.02130.2004-0.0211-0.24950.1068-0.0288-0.03440.13640.01780.1437121.6714-179.8854302.807
514.4525-0.28310.71343.72450.94822.595-0.0842-0.4477-0.56470.6140.1342-0.01760.30190.0547-0.01840.37-0.0051-0.1050.16390.10120.3436120.0977-192.3058306.5806
521.1970.40920.83031.28660.78582.25240.13820.0138-0.21070.12110.0789-0.30930.33060.1511-0.15460.14640.0336-0.0570.15520.02210.2972125.0855-191.9854291.0972
530.77950.60210.41860.48560.33271.4220.09470.1425-0.19880.05080.04-0.21420.2680.2168-0.10760.14960.0207-0.0650.1283-0.02690.2878124.8152-192.2982285.5713
542.42032.91751.63818.50385.59443.85560.20940.20720.2011-0.5848-0.22110.038-0.6575-0.1135-0.03280.40050.06010.0520.1548-0.00740.236100.794-151.2449276.6985
555.3863.7139-3.05184.4895-4.90925.8106-0.18220.53310.1015-0.4786-0.02370.0468-0.0927-0.19560.07770.26250.0894-0.04330.2458-0.00920.129492.2658-160.103275.1976
560.2418-0.27610.40341.64790.2391.1066-0.01170.1741-0.0442-0.27740.05140.01650.05840.0352-0.04270.26920.0374-0.01970.1296-0.020.0886105.48-173.3765268.6145
576.2422-0.0738-1.11771.79730.02161.97550.06280.69290.4785-0.25110.03310.1843-0.1207-0.3559-0.09230.28940.0553-0.07470.19390.02240.144100.0336-169.3542268.4633
580.5581-0.45460.31740.89040.30540.94510.13310.15590.10030.0898-0.0807-0.1167-0.1041-0.1415-0.01840.24770.00890.03660.12420.00590.0926109.3913-162.843270.0323
592.79731.381-0.56140.9445-0.67130.6861-0.2264-0.1287-0.2545-0.16020.0663-0.14160.0484-0.1050.12670.25180.0184-0.01180.0934-0.01420.1422104.277-171.6784280.0891
601.4461-1.48630.21444.2959-0.88473.63670.190.3322-0.1925-0.19510.15120.2461-0.1016-0.4078-0.24710.16830.0351-0.04250.15-0.02170.104795.6043-163.4511277.3402
611.64030.8169-0.7951.42861.29553.1963-0.03890.40310.0681-0.2911-0.10810.1612-0.1645-0.36490.10790.31540.0544-0.03390.2188-0.01210.1209103.4089-164.7604260.7533
620.35730.18920.04784.5183-0.83214.6349-0.0161-0.0828-0.13830.345-0.01220.468-0.2154-0.5419-0.01880.18780.05380.01520.1875-0.01810.104694.1717-160.2778281.6083
638.43854.133-1.84767.10450.40171.405-0.0438-0.28810.74950.21180.0797-0.0346-0.6382-0.1373-0.07280.4020.0662-0.07640.1592-0.02420.159107.9627-156.6804305.646
640.815-0.37630.60051.24950.57641.11690.0904-0.01670.2493-0.16550.18490.0463-0.15820.0152-0.26010.26390.05560.02640.0948-0.01290.1476102.9626-159.5689285.3964
651.5387-0.9226-0.26071.2535-0.55973.13790.0970.03810.3523-0.20530.0424-0.0662-0.33250.093-0.07360.29930.0012-0.00660.07750.00870.1527106.7657-156.8666285.5463
666.73963.8281-3.91683.1446-2.55422.38740.3010.09960.57110.0010.03960.4092-0.6155-0.1632-0.23540.73470.14360.1360.2690.09740.352892.5893-158.0853300.5001
670.3882-0.32660.60540.3993-0.32861.21820.04040.00230.07740.03450.01620.0062-0.3572-0.07570.01290.3944-0.00960.02460.130.01840.0743112.5444-155.5368290.1753
682.70290.9417-0.80720.3718-0.27930.9980.0294-0.0655-0.2376-0.1016-0.1322-0.07190.1351-0.07340.08370.24340.0177-0.01380.07240.00250.13106.677-168.4968291.8408
691.62630.21241.74472.15551.6832.86860.0111-0.3003-0.03560.14230.01920.1934-0.2826-0.32410.01920.28390.05090.0320.17750.01690.0815104.0671-161.7721301.6802
701.2791-0.04440.72920.6117-0.64351.04280.0908-0.2247-0.01590.44570.1041-0.0217-0.098-0.14120.77760.56510.1115-0.00580.13120.0499-0.1298104.2871-148.3359289.1216
710.99450.1248-0.14910.9249-0.28090.0973-0.2714-0.14640.10490.1311-0.0099-0.0335-0.10670.0480.07230.3550.0205-0.05420.11020.00330.104108.6205-161.2678298.9434
725.32082.80390.35921.82180.12250.0790.1914-0.66490.30350.7652-0.25990.18950.0157-0.36260.03590.36570.0480.01930.3147-0.0370.1287105.0047-164.1774310.8211
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection details
1X-RAY DIFFRACTION1chain 'A' and (resid 22 through 33 )
2X-RAY DIFFRACTION2chain 'A' and (resid 34 through 58 )
3X-RAY DIFFRACTION3chain 'A' and (resid 59 through 81 )
4X-RAY DIFFRACTION4chain 'A' and (resid 82 through 95 )
5X-RAY DIFFRACTION5chain 'A' and (resid 96 through 104 )
6X-RAY DIFFRACTION6chain 'A' and (resid 105 through 120 )
7X-RAY DIFFRACTION7chain 'A' and (resid 121 through 140 )
8X-RAY DIFFRACTION8chain 'B' and (resid 22 through 33 )
9X-RAY DIFFRACTION9chain 'B' and (resid 34 through 45 )
10X-RAY DIFFRACTION10chain 'B' and (resid 46 through 58 )
11X-RAY DIFFRACTION11chain 'B' and (resid 59 through 67 )
12X-RAY DIFFRACTION12chain 'B' and (resid 68 through 104 )
13X-RAY DIFFRACTION13chain 'B' and (resid 105 through 110 )
14X-RAY DIFFRACTION14chain 'B' and (resid 111 through 120 )
15X-RAY DIFFRACTION15chain 'B' and (resid 121 through 139 )
16X-RAY DIFFRACTION16chain 'C' and (resid 22 through 33 )
17X-RAY DIFFRACTION17chain 'C' and (resid 34 through 58 )
18X-RAY DIFFRACTION18chain 'C' and (resid 59 through 81 )
19X-RAY DIFFRACTION19chain 'C' and (resid 82 through 95 )
20X-RAY DIFFRACTION20chain 'C' and (resid 96 through 104 )
21X-RAY DIFFRACTION21chain 'C' and (resid 105 through 120 )
22X-RAY DIFFRACTION22chain 'C' and (resid 121 through 139 )
23X-RAY DIFFRACTION23chain 'D' and (resid 22 through 33 )
24X-RAY DIFFRACTION24chain 'D' and (resid 34 through 58 )
25X-RAY DIFFRACTION25chain 'D' and (resid 59 through 67 )
26X-RAY DIFFRACTION26chain 'D' and (resid 68 through 81 )
27X-RAY DIFFRACTION27chain 'D' and (resid 82 through 95 )
28X-RAY DIFFRACTION28chain 'D' and (resid 96 through 120 )
29X-RAY DIFFRACTION29chain 'D' and (resid 121 through 139 )
30X-RAY DIFFRACTION30chain 'E' and (resid 22 through 33 )
31X-RAY DIFFRACTION31chain 'E' and (resid 34 through 58 )
32X-RAY DIFFRACTION32chain 'E' and (resid 59 through 67 )
33X-RAY DIFFRACTION33chain 'E' and (resid 68 through 95 )
34X-RAY DIFFRACTION34chain 'E' and (resid 96 through 110 )
35X-RAY DIFFRACTION35chain 'E' and (resid 111 through 120 )
36X-RAY DIFFRACTION36chain 'E' and (resid 121 through 140 )
37X-RAY DIFFRACTION37chain 'F' and (resid 22 through 58 )
38X-RAY DIFFRACTION38chain 'F' and (resid 59 through 67 )
39X-RAY DIFFRACTION39chain 'F' and (resid 68 through 95 )
40X-RAY DIFFRACTION40chain 'F' and (resid 96 through 104 )
41X-RAY DIFFRACTION41chain 'F' and (resid 105 through 120 )
42X-RAY DIFFRACTION42chain 'F' and (resid 121 through 139 )
43X-RAY DIFFRACTION43chain 'G' and (resid 22 through 33 )
44X-RAY DIFFRACTION44chain 'G' and (resid 34 through 58 )
45X-RAY DIFFRACTION45chain 'G' and (resid 59 through 67 )
46X-RAY DIFFRACTION46chain 'G' and (resid 68 through 81 )
47X-RAY DIFFRACTION47chain 'G' and (resid 82 through 95 )
48X-RAY DIFFRACTION48chain 'G' and (resid 96 through 104 )
49X-RAY DIFFRACTION49chain 'G' and (resid 105 through 120 )
50X-RAY DIFFRACTION50chain 'G' and (resid 121 through 127 )
51X-RAY DIFFRACTION51chain 'G' and (resid 128 through 139 )
52X-RAY DIFFRACTION52chain 'H' and (resid 22 through 67 )
53X-RAY DIFFRACTION53chain 'H' and (resid 68 through 145 )
54X-RAY DIFFRACTION54chain 'I' and (resid 22 through 26 )
55X-RAY DIFFRACTION55chain 'I' and (resid 27 through 33 )
56X-RAY DIFFRACTION56chain 'I' and (resid 34 through 45 )
57X-RAY DIFFRACTION57chain 'I' and (resid 46 through 67 )
58X-RAY DIFFRACTION58chain 'I' and (resid 68 through 81 )
59X-RAY DIFFRACTION59chain 'I' and (resid 82 through 95 )
60X-RAY DIFFRACTION60chain 'I' and (resid 96 through 104 )
61X-RAY DIFFRACTION61chain 'I' and (resid 105 through 120 )
62X-RAY DIFFRACTION62chain 'I' and (resid 121 through 139 )
63X-RAY DIFFRACTION63chain 'J' and (resid 22 through 33 )
64X-RAY DIFFRACTION64chain 'J' and (resid 34 through 45 )
65X-RAY DIFFRACTION65chain 'J' and (resid 46 through 58 )
66X-RAY DIFFRACTION66chain 'J' and (resid 59 through 67 )
67X-RAY DIFFRACTION67chain 'J' and (resid 68 through 81 )
68X-RAY DIFFRACTION68chain 'J' and (resid 82 through 95 )
69X-RAY DIFFRACTION69chain 'J' and (resid 96 through 104 )
70X-RAY DIFFRACTION70chain 'J' and (resid 105 through 120 )
71X-RAY DIFFRACTION71chain 'J' and (resid 121 through 127 )
72X-RAY DIFFRACTION72chain 'J' and (resid 128 through 140 )

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