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- PDB-5w5t: Agrobacterium tumefaciens ADP-Glucose Pyrophosphorylase bound to ... -

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Basic information

Entry
Database: PDB / ID: 5w5t
TitleAgrobacterium tumefaciens ADP-Glucose Pyrophosphorylase bound to activator ethyl pyruvate
ComponentsGlucose-1-phosphate adenylyltransferase
KeywordsTRANSFERASE / Glucose-1-phosphate adenylyltransferase / glycogen biosynthesis / starch biosynthesis / allosterism
Function / homology
Function and homology information


glucose-1-phosphate adenylyltransferase / glucose-1-phosphate adenylyltransferase activity / glycogen biosynthetic process / ATP binding
Similarity search - Function
Glucose-1-phosphate adenylyltransferase GlgC, bacterial / ADP-glucose pyrophosphorylase, conserved site / Glucose-1-phosphate adenylyltransferase / ADP-glucose pyrophosphorylase signature 1. / ADP-glucose pyrophosphorylase signature 2. / ADP-glucose pyrophosphorylase signature 3. / Nucleotidyl transferase domain / Nucleotidyl transferase / Hexapeptide repeat proteins / UDP N-Acetylglucosamine Acyltransferase; domain 1 ...Glucose-1-phosphate adenylyltransferase GlgC, bacterial / ADP-glucose pyrophosphorylase, conserved site / Glucose-1-phosphate adenylyltransferase / ADP-glucose pyrophosphorylase signature 1. / ADP-glucose pyrophosphorylase signature 2. / ADP-glucose pyrophosphorylase signature 3. / Nucleotidyl transferase domain / Nucleotidyl transferase / Hexapeptide repeat proteins / UDP N-Acetylglucosamine Acyltransferase; domain 1 / Trimeric LpxA-like superfamily / 3 Solenoid / Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A / Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A / Nucleotide-diphospho-sugar transferases / Alpha-Beta Complex / Mainly Beta / Alpha Beta
Similarity search - Domain/homology
ethyl 2-oxopropanoate / Glucose-1-phosphate adenylyltransferase
Similarity search - Component
Biological speciesRhizobium radiobacter (bacteria)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.76 Å
AuthorsMascarenhas, R.N. / Hill, B.L. / Ballicora, M.A. / Liu, D.
Funding support United States, 1items
OrganizationGrant numberCountry
National Science Foundation (NSF, United States)MCB1616851 United States
CitationJournal: J. Biol. Chem. / Year: 2019
Title: Structural analysis reveals a pyruvate-binding activator site in theAgrobacterium tumefaciensADP-glucose pyrophosphorylase.
Authors: Hill, B.L. / Mascarenhas, R. / Patel, H.P. / Asencion Diez, M.D. / Wu, R. / Iglesias, A.A. / Liu, D. / Ballicora, M.A.
History
DepositionJun 15, 2017Deposition site: RCSB / Processing site: RCSB
Revision 1.0Nov 14, 2018Provider: repository / Type: Initial release
Revision 1.1Nov 21, 2018Group: Data collection / Database references / Category: citation / citation_author
Item: _citation.journal_abbrev / _citation.pdbx_database_id_DOI ..._citation.journal_abbrev / _citation.pdbx_database_id_DOI / _citation.pdbx_database_id_PubMed / _citation.title / _citation_author.identifier_ORCID / _citation_author.name
Revision 1.2Feb 20, 2019Group: Author supporting evidence / Data collection / Category: pdbx_audit_support / Item: _pdbx_audit_support.funding_organization
Revision 1.3Nov 27, 2019Group: Author supporting evidence / Database references / Category: citation / pdbx_audit_support
Item: _citation.journal_volume / _citation.page_first ..._citation.journal_volume / _citation.page_first / _citation.page_last / _citation.year / _pdbx_audit_support.funding_organization
Revision 2.0Mar 31, 2021Group: Atomic model / Data collection / Refinement description
Category: atom_site / pdbx_nonpoly_scheme ...atom_site / pdbx_nonpoly_scheme / pdbx_refine_tls_group / refine / refine_hist / refine_ls_restr / refine_ls_shell
Item: _atom_site.Cartn_x / _pdbx_nonpoly_scheme.auth_mon_id ..._atom_site.Cartn_x / _pdbx_nonpoly_scheme.auth_mon_id / _pdbx_nonpoly_scheme.auth_seq_num / _pdbx_refine_tls_group.beg_auth_asym_id / _pdbx_refine_tls_group.beg_auth_seq_id / _pdbx_refine_tls_group.end_auth_asym_id / _pdbx_refine_tls_group.end_auth_seq_id / _pdbx_refine_tls_group.selection_details / _refine.B_iso_max / _refine.B_iso_mean / _refine.B_iso_min / _refine.ls_R_factor_R_free / _refine.ls_R_factor_R_work / _refine.ls_R_factor_obs / _refine.ls_d_res_high / _refine.ls_number_reflns_R_work / _refine.ls_percent_reflns_obs / _refine_hist.cycle_id / _refine_hist.d_res_high / _refine_hist.number_atoms_total / _refine_hist.pdbx_B_iso_mean_ligand / _refine_hist.pdbx_B_iso_mean_solvent / _refine_hist.pdbx_number_atoms_ligand / _refine_hist.pdbx_number_residues_total / _refine_ls_restr.dev_ideal / _refine_ls_restr.number / _refine_ls_restr.type / _refine_ls_shell.R_factor_R_free_error / _refine_ls_shell.number_reflns_all / _refine_ls_shell.pdbx_total_number_of_bins_used
Revision 2.1Mar 13, 2024Group: Data collection / Database references / Category: chem_comp_atom / chem_comp_bond / database_2
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Glucose-1-phosphate adenylyltransferase
B: Glucose-1-phosphate adenylyltransferase
C: Glucose-1-phosphate adenylyltransferase
D: Glucose-1-phosphate adenylyltransferase
E: Glucose-1-phosphate adenylyltransferase
F: Glucose-1-phosphate adenylyltransferase
G: Glucose-1-phosphate adenylyltransferase
H: Glucose-1-phosphate adenylyltransferase
I: Glucose-1-phosphate adenylyltransferase
J: Glucose-1-phosphate adenylyltransferase
K: Glucose-1-phosphate adenylyltransferase
L: Glucose-1-phosphate adenylyltransferase
M: Glucose-1-phosphate adenylyltransferase
N: Glucose-1-phosphate adenylyltransferase
O: Glucose-1-phosphate adenylyltransferase
P: Glucose-1-phosphate adenylyltransferase
Q: Glucose-1-phosphate adenylyltransferase
R: Glucose-1-phosphate adenylyltransferase
Z: Glucose-1-phosphate adenylyltransferase
T: Glucose-1-phosphate adenylyltransferase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)941,950151
Polymers929,34820
Non-polymers12,602131
Water202,79511257
1
A: Glucose-1-phosphate adenylyltransferase
B: Glucose-1-phosphate adenylyltransferase
C: Glucose-1-phosphate adenylyltransferase
D: Glucose-1-phosphate adenylyltransferase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)188,55632
Polymers185,8704
Non-polymers2,68628
Water724
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area18210 Å2
ΔGint-251 kcal/mol
Surface area61370 Å2
MethodPISA
2
Q: Glucose-1-phosphate adenylyltransferase
R: Glucose-1-phosphate adenylyltransferase
hetero molecules

E: Glucose-1-phosphate adenylyltransferase
F: Glucose-1-phosphate adenylyltransferase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)188,66433
Polymers185,8704
Non-polymers2,79429
Water724
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
crystal symmetry operation1_545x,y-1,z1
Buried area18880 Å2
ΔGint-298 kcal/mol
Surface area61020 Å2
MethodPISA
3
O: Glucose-1-phosphate adenylyltransferase
P: Glucose-1-phosphate adenylyltransferase
hetero molecules

G: Glucose-1-phosphate adenylyltransferase
H: Glucose-1-phosphate adenylyltransferase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)188,09127
Polymers185,8704
Non-polymers2,22223
Water724
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
crystal symmetry operation1_545x,y-1,z1
Buried area17700 Å2
ΔGint-242 kcal/mol
Surface area60590 Å2
MethodPISA
4
I: Glucose-1-phosphate adenylyltransferase
J: Glucose-1-phosphate adenylyltransferase
M: Glucose-1-phosphate adenylyltransferase
N: Glucose-1-phosphate adenylyltransferase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)188,54832
Polymers185,8704
Non-polymers2,67828
Water724
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area18680 Å2
ΔGint-233 kcal/mol
Surface area61330 Å2
MethodPISA
5
K: Glucose-1-phosphate adenylyltransferase
L: Glucose-1-phosphate adenylyltransferase
Z: Glucose-1-phosphate adenylyltransferase
T: Glucose-1-phosphate adenylyltransferase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)188,09127
Polymers185,8704
Non-polymers2,22223
Water724
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area16680 Å2
ΔGint-242 kcal/mol
Surface area61200 Å2
MethodPISA
Unit cell
Length a, b, c (Å)93.781, 140.145, 228.855
Angle α, β, γ (deg.)107.81, 101.84, 90.06
Int Tables number1
Space group name H-MP1

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Components

#1: Protein
Glucose-1-phosphate adenylyltransferase / ADP-glucose pyrophosphorylase / ADPGlc PPase / ADP-glucose synthase


Mass: 46467.398 Da / Num. of mol.: 20
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Rhizobium radiobacter (bacteria) / Gene: glgC / Production host: Escherichia coli K-12 (bacteria)
References: UniProt: P39669, glucose-1-phosphate adenylyltransferase
#2: Chemical...
ChemComp-SO4 / SULFATE ION


Mass: 96.063 Da / Num. of mol.: 75 / Source method: obtained synthetically / Formula: SO4
#3: Chemical...
ChemComp-GOL / GLYCEROL / GLYCERIN / PROPANE-1,2,3-TRIOL


Mass: 92.094 Da / Num. of mol.: 46 / Source method: obtained synthetically / Formula: C3H8O3
#4: Chemical
ChemComp-9X7 / ethyl 2-oxopropanoate


Mass: 116.115 Da / Num. of mol.: 10 / Source method: obtained synthetically / Formula: C5H8O3
#5: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 11257 / Source method: isolated from a natural source / Formula: H2O

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 3.01 Å3/Da / Density % sol: 59.12 %
Crystal growTemperature: 277 K / Method: vapor diffusion, hanging drop / Details: 50mM HEPES pH7.5, 1.5M LiSO4

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Data collection

DiffractionMean temperature: 80 K
Diffraction sourceSource: SYNCHROTRON / Site: APS / Beamline: 19-ID / Wavelength: 0.98 Å
DetectorType: MARRESEARCH / Detector: CCD / Date: Apr 15, 2016
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.98 Å / Relative weight: 1
Reflection twinOperator: h,-k,-h-l / Fraction: 0.5
ReflectionResolution: 1.76→50 Å / Num. obs: 1035315 / % possible obs: 97.1 % / Redundancy: 2.1 % / Rmerge(I) obs: 0.05 / Rpim(I) all: 0.046 / Rrim(I) all: 0.068 / Χ2: 0.926 / Net I/σ(I): 8.7 / Num. measured all: 2210333
Reflection shell

Diffraction-ID: 1

Resolution (Å)Redundancy (%)Rmerge(I) obsNum. unique allCC1/2Rpim(I) allRrim(I) allΧ2% possible all
1.76-1.791.90.618487230.7360.5560.8330.89991.5
1.79-1.821.90.509507960.7950.4580.6860.995.3
1.82-1.862.10.44512540.8310.3940.5930.91296
1.86-1.92.20.355513580.8810.3180.4780.9396.4
1.9-1.942.20.28516430.9170.250.3770.94396.6
1.94-1.982.20.232515660.940.2080.3130.96496.7
1.98-2.032.20.182516510.9620.1640.2460.96996.9
2.03-2.092.20.149516940.9740.1340.2010.98497
2.09-2.152.20.128517470.9810.1150.1720.97497.2
2.15-2.222.20.105520750.9870.0940.1410.98197.3
2.22-2.32.20.087518240.990.0780.1180.96497.4
2.3-2.392.20.074520210.9930.0670.10.95697.6
2.39-2.52.20.065521750.9940.0590.0880.93697.8
2.5-2.632.20.054522840.9950.0490.0740.9298
2.63-2.792.20.046523450.9970.0420.0620.90698.2
2.79-3.012.20.037525180.9970.0340.050.89898.4
3.01-3.312.20.034525100.9960.0310.0460.95598.5
3.31-3.792.10.031525480.9960.0290.0421.05298.6
3.79-4.782.10.026526200.9970.0240.0350.86798.7
4.78-502.10.023519630.9980.0210.0310.59497.4

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Processing

Software
NameVersionClassification
PHENIX1.9_1692refinement
HKL-3000data scaling
PDB_EXTRACT3.22data extraction
HKL-3000data reduction
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT / Resolution: 1.76→41.26 Å / Cross valid method: FREE R-VALUE / σ(F): 1.96 / Phase error: 23.89 / Stereochemistry target values: TWIN_LSQ_F
RfactorNum. reflection% reflection
Rfree0.207 50673 5.2 %
Rwork0.163 --
obs0.166 974344 91.1 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 25.64 Å2
Refinement stepCycle: LAST / Resolution: 1.76→41.26 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms64362 0 731 11257 76350
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.00766593
X-RAY DIFFRACTIONf_angle_d1.10690425
X-RAY DIFFRACTIONf_dihedral_angle_d13.60424222
X-RAY DIFFRACTIONf_chiral_restr0.0439789
X-RAY DIFFRACTIONf_plane_restr0.00511798
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
1.7629-1.79330.28969560.261720078X-RAY DIFFRACTION38
1.7933-1.82590.281414390.247227952X-RAY DIFFRACTION52
1.8259-1.8610.252920350.235539001X-RAY DIFFRACTION73
1.861-1.8990.256223930.222346186X-RAY DIFFRACTION87
1.899-1.94030.255725100.208148749X-RAY DIFFRACTION91
1.9403-1.98540.237526820.201448843X-RAY DIFFRACTION92
1.9854-2.0350.236825060.193949368X-RAY DIFFRACTION92
2.035-2.090.218526730.189449092X-RAY DIFFRACTION92
2.09-2.15150.225125270.187449322X-RAY DIFFRACTION92
2.1515-2.2210.221526320.183649540X-RAY DIFFRACTION92
2.221-2.30030.216725190.175449465X-RAY DIFFRACTION93
2.3003-2.39240.228626340.172749493X-RAY DIFFRACTION93
2.3924-2.50130.217326530.173549638X-RAY DIFFRACTION93
2.5013-2.63310.215927270.169249657X-RAY DIFFRACTION93
2.6331-2.7980.208328050.164549704X-RAY DIFFRACTION93
2.798-3.01390.203226500.152849965X-RAY DIFFRACTION93
3.0139-3.3170.200125280.145650057X-RAY DIFFRACTION94
3.317-3.79650.173523710.124750308X-RAY DIFFRACTION94
3.7965-4.78130.154725240.109450113X-RAY DIFFRACTION94
4.7813-35.16910.210225130.183749508X-RAY DIFFRACTION93
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
10.0131-0.01030.00180.01980.00150.00580.0530.008-0.022-0.05880.02260.023-0.015-0.01060.03080.15260.029-0.01360.08310.02160.0446-43.4698-28.497558.6602
20.0027-0.0029-0.00030.011-0.00440.00610.04340.0072-0.0246-0.05920.040.04880.0304-0.01620.02210.14510.0303-0.0260.0910.01580.0766-46.3526-36.989259.5297
30.014-0.00530.00830.0027-0.00330.00370.00060.0072-0.0033-0.0089-0.00390.0153-0.0029-0.0106-0.01170.1990.0954-0.14620.20190.12490.2338-65.3987-22.462151.9597
40.00290.0010.0021-0.00020.00170.00050.0050.0329-0.0072-0.01860.02570.02410.0132-0.01230.00620.17410.0157-0.13940.18590.04410.1629-59.5309-36.982649.8996
50.0029-0.0008-0.0050.00480.00430.01450.0097-0.00490.0097-0.02850.01720.0257-0.01560.00470.00310.12060.03610.03140.08890.02940.0997-46.8203-15.622866.4138
60.04610.0276-0.00620.0135-0.010.01-0.00710.06540.0507-0.06370.0123-0.0177-0.01840.0231-0.01890.1297-0.02810.20410.0320.08130.0432-28.6786-4.675360.1127
70.0020.00240.00510.00990.00160.0094-0.0057-0.0031-0.00740.02750.0489-0.0503-0.00790.00040.02440.0715-0.00630.00490.0923-0.02540.0898-20.9901-31.043688.2973
80.00020.00040.00020.0004-0.00040.0003-0.0158-0.0109-0.0090.00910.0067-0.00140.011-0.0092-00.14780.0044-0.05710.1145-0.03880.0998-19.1909-42.245497.1781
90.00170.0011-0.00160.0009-0.00360.0107-0.0148-0.00630.01140.029-0.0101-0.0377-0.01030.0203-0.03370.0253-0.0406-0.09380.0838-0.160.241-0.2984-26.651192.486
100.0043-0.0023-0.00120.0007-0.00090.002-0.0056-0.01490.01070.02690.0149-0.03180.01550.0161-0.00040.1390.035-0.09780.1524-0.09350.2235-3.0326-37.50398.7055
110.0064-0.0006-0.00990.0023-0.00060.03590.0085-0.01050.0368-0.01370.0308-0.0624-0.0475-0.02490.00690.0859-0.01120.04320.0797-0.02850.1473-22.4487-12.259280.7074
120.0063-0.0006-0.00190.0148-0.00150.0036-0.004-0.02190.01580.01780.0065-0.0099-0.0131-0.02850.0010.10520.03740.09360.116-0.06240.0954-34.5406-5.209688.5767
130.00040.0003-0.00050.0006-0.00010.001-0.0015-0.01310.00590.01450.0144-0.0062-0.0024-0.012400.22580.0480.01510.2091-0.08690.146-31.5016-5.4529102.4974
140.01130.0029-0.00120.0171-0.00110.01440.025-0.01040.0060.03860.04220.0444-0.0005-0.01010.04370.05510.0021-0.00160.07110.01420.0717-40.2805-44.584888.924
15-0.00010.00020.00010.00080.00070.001-0.0056-0.01160.00560.00470.004-0.0006-0.00370.009800.2298-0.00930.05120.17260.01380.1349-41.9549-34.0092100.2534
160.0077-0.0017-0.00080.00730.0040.0025-0.0095-0.004700.01150.00430.03710.0013-0.0134-0.01170.0401-0.00140.04690.10490.0710.172-57.455-46.699391.0706
170.0061-0.0005-0.0040.0028-0.00160.00280.0161-0.0267-0.01060.01730.0070.0228-0.0076-0.04890.00620.0915-0.03070.15130.11870.08450.2066-61.8228-46.20599.6455
180.00160.00080.0007-0.00030.00130.00280.0029-0.0089-0.00250.02660.01030.0244-0.0146-0.00660.00320.16180.00290.09930.16050.06040.1702-58.6463-42.5281101.7695
190.0034-0.0037-0.00050.00420.00130.00040.00450.0015-0.0269-0.01110.02760.0165-0.0010.01580.0070.0238-0.0184-0.00380.06490.02750.1215-46.0285-60.088383.1835
200.0136-0.0031-0.00360.00420.00030.00790.0003-0.0444-0.0420.00590.00610.00530.02030.0297-0.010.05560.0238-0.05370.08380.02850.1104-26.6336-71.056283.7849
210.00360.0020.00310.0010.00120.00250.0029-0.0065-0.00780.01330.00890.00860.00530.01080.00480.17360.0467-0.02260.1540.07640.1019-29.0427-71.0823101.4486
220.012-0.00890.01590.0145-0.01760.03080.05390.00880.0309-0.05470.0246-0.02410.00690.03050.06810.15610.03950.06380.0729-0.03530.0646-20.4212-46.897457.4856
230.00850.0032-0.00690.0017-0.00210.00590.0345-0.00020.0185-0.0240.0075-0.0015-0.00350.00710.010.14430.03270.01870.1026-0.01450.083-26.1628-38.296958.9622
240.00990.0055-0.0010.0108-0.00380.00360.00620.01810.0056-0.0221-0.0027-0.0282-0.01630.0066-0.01020.11680.04820.15510.0485-0.03510.1101-8.2477-42.6355.6463
250.0013-0.0009-0.00050.00030.00030.00030.00190.00580.0063-0.00080.0026-0.0092-0.00110.0031-0.00110.19070.08130.11040.1971-0.03210.19533.9758-52.675147.0855
260.000700.0002000.00180.00170.01030.0043-0.00310.0072-0.0039-0.00070.0079-0.0040.19370.03150.1140.12130.00650.1799-6.4731-38.195849.8077
270.0013-0.0007-0.0003-0.0001-0.00030.00040.00240.0076-0.0032-0.01430.0006-0.0097-0.0041-0.001700.20210.03250.11420.189-0.00150.1874-4.3775-41.777645.7944
280.00630.00230.00120.0039-0.00010.00020.02160.0011-0.0106-0.00990.001-0.01330.00980.0030.00940.13040.02230.02440.0946-0.02940.1006-14.4242-61.532163.9863
290.0075-0.0031-0.00930.01150.01040.01390.0224-0.0004-0.0217-0.01020.02090.00230.0191-0.00620.02680.04680.0099-0.06010.0428-0.00320.0885-34.2456-67.291570.7247
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1210.0117-0.0019-0.0050.002-0.00160.008-0.0022-0.02150.01590.0134-0.0017-0.0003-0.009-0.0186-0.0060.11130.04040.1050.0846-0.04820.082311.2105-75.024245.6731
122-00-0.00030.00070.00110.00090.0063-0.01240.00350.01230.0167-0.0015-0.0064-0.0122-00.2480.03190.04510.1907-0.06920.13413.4615-74.763858.7032
1230.0037-0.00370.00040.02260.00730.01180.04170.026-0.0358-0.04710.03930.03720.00740.00340.04240.06690.0121-0.00640.08790.01370.06776.6199-101.0912101.9768
124-0-0.0001-0.00030.00030.00060.0004-0.00510.0125-0.012-0.0124-0.00190.00090.00750.0103-0.00240.18330.0441-0.05350.1433-0.01440.1165.4097-112.129393.3822
1250.01560.0067-0.00340.0029-0.00050.00640.01050.0325-0.0141-0.03970.00490.05870.0155-0.0433-0.0030.03360.0543-0.17950.05270.08220.1341-12.8038-99.824895.0945
1260.0015-0.0002-0.00120.00010.00220.00410.00620.0150.0005-0.02280.01060.02370.0111-0.00240.00290.15520.0074-0.09860.17030.04320.1501-11.3457-104.108588.3479
1270.0035-0.00190.00110.00260.000200.01340.00740.02230.00640.00120.019-0.00320.006300.0880.0052-0.00480.11910.03570.1255-1.2527-84.4168106.7461
1280.00860.00330.01350.0216-0.00520.01460.02990.04680.0562-0.02450.0307-0.0098-0.02080.02180.01550.0587-0.01090.05020.08890.01280.095219.2652-76.8077107.1888
1290.0028-0.0027-0.00240.0020.00130.0017-0.00060.00520.003-0.01690.00980.0008-0.00940.01310.00210.1559-0.01770.04440.16440.07740.069118.0233-75.25889.1705
1300.0220.0043-0.00850.0443-0.02720.02280.0754-0.0176-0.03780.06050.0467-0.02810.00530.00990.08030.0743-0.024-0.02560.0778-0.02080.053424.4752-101.5638131.5515
131-0.00020.00020.00020.0026-0.00220.00080.02-0.0195-0.02250.02820.0143-0.01780.0276-0.00030.01380.1189-0.0364-0.07990.089-0.01090.069129.9902-108.3435138.443
1320.00590.00190.00780.00010.00330.00770.0074-0.0188-0.01020.0169-0.0151-0.0206-0.00850.0235-0.0110.0685-0.054-0.15620.1079-0.08180.200747.5618-95.1682138.8194
1330.0002-0.0007-0.0002-0.0004-0.0011-0.00020.0201-0.0249-0.010.03220.0164-0.03030.02690.00410.01550.16760.0103-0.1240.1277-0.01510.14741.5277-107.358143.5457
1340.0023-0.00320.0010.0096-0.00370.00090.0162-0.00460.0233-0.00870.0229-0.01090.0003-0.00960.00770.0567-0.0197-0.00320.0821-0.01990.094530.2039-86.0303126.0207
1350.0039-0.00010.00520.0093-0.00550.0150.0048-0.0480.04290.01490.00450.0083-0.0177-0.0209-0.00560.04120.02480.08320.075-0.03840.090710.7989-75.0683126.6922
1360.0020.0025-0.00260.0026-0.00240.0030.0014-0.00960.00550.01650.01570.0003-0.0086-0.01480.00560.16760.01240.04620.1786-0.08340.101413.0209-75.2608144.4118
1370.0018-0.00080.00220.0331-0.02130.01630.0580.0058-0.04030.08930.0371-0.0367-0.02110.02910.03890.1809-0.0181-0.03610.0696-0.02780.0763-21.4383-31.31163.7556
1380.0028-0.0027-0.00160.00450.00120.00170.0007-0.0145-0.00830.01460.0098-0.0140.0192-0.00360.00050.1919-0.0232-0.09330.0808-0.05790.1045-15.8744-38.97878.5965
1390.0034-0.00140.00540.0006-0.00040.00420.0002-0.0118-0.00620.0033-0.0111-0.0039-0.00790.0212-0.0130.1649-0.0522-0.17850.1332-0.09150.211.5661-25.487710.6616
1400.00120.00010.0007-0.0003-0.0009-00.0065-0.0150.00250.02240.0161-0.01590.02090.01370.00030.23630.0036-0.14430.1611-0.03610.2168-3.887-37.846914.9792
1410.001-0.00010.00080.0045-0.0040.00290.0097-0.00070.00830.0320.0274-0.0297-0.016-0.00840.00050.1315-0.0186-0.02050.0787-0.03040.119-16.0495-16.0622-1.6474
1420.0055-0.00220.00030.010.00630.01010.0139-0.02130.0330.0439-0.00310.0201-0.0113-0.0225-0.00430.15070.01590.17140.0723-0.03720.0711-35.3524-5.2243-0.0502
1430.0010.0027-0.0030.0038-0.00470.0062-0.001-0.00820.00730.01270.0088-0.00180.0024-0.01070.00710.2227-0.0140.06320.1612-0.06250.0773-32.6443-5.87117.5968
1440.0093-0.0063-0.00090.00870.00790.01420.01540.0039-0.0226-0.03540.02690.0466-0.0233-0.01240.02180.0935-0.0068-0.02880.08140.04670.1176-42.2022-28.5411-27.0926
1450.00210.00140.00010.0064-0.00160.00280.011-0.0012-0.0041-0.03030.01820.01760.01010.00190.00830.11810.003-0.0350.09710.01890.0884-39.1047-39.2784-27.8768
1460.0027-0.0008-0.0001-0.001-0.00120.001-0.00410.00730.0021-0.022-0.01610.0269-0.0089-0.0209-0.02140.02060.0423-0.15990.08430.14830.2408-60.9009-26.3688-30.6716
1470.0010.00040.00030.00010.00010.0002-0.0040.0147-0.0027-0.0125-0.00250.00550.0011-0.001200.222-0.0356-0.1160.18030.05980.2123-53.8018-40.3458-39.5893
1480.0015-0.00160.00210.0014-0.00170.00150.02940.00690.0061-0.01060.01910.0274-0.0066-0.0064-00.1096-0.0008-0.05280.15780.07950.2359-57.5983-24.0287-27.1591
1490.00130.0001-0.00010.00060.0001-0.0003-0.0076-0.00930.0094-0.00550.00790.0149-0.00690.00700.12480.00380.0030.12470.04230.185-44.7106-12.3477-19.3505
1500.0152-0.0010.0090.0272-0.01640.01030.030.03530.0391-0.03370.05190.0023-0.05120.0260.03550.1074-0.02960.07670.094-0.00040.0913-27.5721-6.4967-19.9214
1510.00370.00140.00070.00780.00510.00390.00360.01170.0068-0.01670.01970.0065-0.00440.00910.00290.22-0.03720.03960.160.0660.0901-29.2967-4.6208-37.9005
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection details
1X-RAY DIFFRACTION1CHAIN 'A' AND (RESID 7 THROUGH 71 )
2X-RAY DIFFRACTION2CHAIN 'A' AND (RESID 72 THROUGH 153 )
3X-RAY DIFFRACTION3CHAIN 'A' AND (RESID 154 THROUGH 209 )
4X-RAY DIFFRACTION4CHAIN 'A' AND (RESID 210 THROUGH 256 )
5X-RAY DIFFRACTION5CHAIN 'A' AND (RESID 257 THROUGH 305 )
6X-RAY DIFFRACTION6CHAIN 'A' AND (RESID 306 THROUGH 419 )
7X-RAY DIFFRACTION7CHAIN 'B' AND (RESID 7 THROUGH 91 )
8X-RAY DIFFRACTION8CHAIN 'B' AND (RESID 92 THROUGH 125 )
9X-RAY DIFFRACTION9CHAIN 'B' AND (RESID 126 THROUGH 209 )
10X-RAY DIFFRACTION10CHAIN 'B' AND (RESID 210 THROUGH 256 )
11X-RAY DIFFRACTION11CHAIN 'B' AND (RESID 257 THROUGH 332 )
12X-RAY DIFFRACTION12CHAIN 'B' AND (RESID 333 THROUGH 393 )
13X-RAY DIFFRACTION13CHAIN 'B' AND (RESID 394 THROUGH 421 )
14X-RAY DIFFRACTION14CHAIN 'C' AND (RESID 7 THROUGH 96 )
15X-RAY DIFFRACTION15CHAIN 'C' AND (RESID 97 THROUGH 125 )
16X-RAY DIFFRACTION16CHAIN 'C' AND (RESID 126 THROUGH 172 )
17X-RAY DIFFRACTION17CHAIN 'C' AND (RESID 173 THROUGH 226 )
18X-RAY DIFFRACTION18CHAIN 'C' AND (RESID 227 THROUGH 256 )
19X-RAY DIFFRACTION19CHAIN 'C' AND (RESID 257 THROUGH 305 )
20X-RAY DIFFRACTION20CHAIN 'C' AND (RESID 306 THROUGH 393 )
21X-RAY DIFFRACTION21CHAIN 'C' AND (RESID 394 THROUGH 421 )
22X-RAY DIFFRACTION22CHAIN 'D' AND (RESID 7 THROUGH 71 )
23X-RAY DIFFRACTION23CHAIN 'D' AND (RESID 72 THROUGH 110 )
24X-RAY DIFFRACTION24CHAIN 'D' AND (RESID 111 THROUGH 172 )
25X-RAY DIFFRACTION25CHAIN 'D' AND (RESID 173 THROUGH 201 )
26X-RAY DIFFRACTION26CHAIN 'D' AND (RESID 202 THROUGH 226 )
27X-RAY DIFFRACTION27CHAIN 'D' AND (RESID 227 THROUGH 255 )
28X-RAY DIFFRACTION28CHAIN 'D' AND (RESID 256 THROUGH 298 )
29X-RAY DIFFRACTION29CHAIN 'D' AND (RESID 299 THROUGH 340 )
30X-RAY DIFFRACTION30CHAIN 'D' AND (RESID 341 THROUGH 393 )
31X-RAY DIFFRACTION31CHAIN 'D' AND (RESID 394 THROUGH 421 )
32X-RAY DIFFRACTION32CHAIN 'E' AND (RESID 7 THROUGH 97 )
33X-RAY DIFFRACTION33CHAIN 'E' AND (RESID 98 THROUGH 125 )
34X-RAY DIFFRACTION34CHAIN 'E' AND (RESID 126 THROUGH 226 )
35X-RAY DIFFRACTION35CHAIN 'E' AND (RESID 227 THROUGH 305 )
36X-RAY DIFFRACTION36CHAIN 'E' AND (RESID 306 THROUGH 393 )
37X-RAY DIFFRACTION37CHAIN 'E' AND (RESID 394 THROUGH 421 )
38X-RAY DIFFRACTION38CHAIN 'F' AND (RESID 7 THROUGH 81 )
39X-RAY DIFFRACTION39CHAIN 'F' AND (RESID 82 THROUGH 112 )
40X-RAY DIFFRACTION40CHAIN 'F' AND (RESID 113 THROUGH 153 )
41X-RAY DIFFRACTION41CHAIN 'F' AND (RESID 154 THROUGH 209 )
42X-RAY DIFFRACTION42CHAIN 'F' AND (RESID 210 THROUGH 256 )
43X-RAY DIFFRACTION43CHAIN 'F' AND (RESID 257 THROUGH 305 )
44X-RAY DIFFRACTION44CHAIN 'F' AND (RESID 306 THROUGH 393 )
45X-RAY DIFFRACTION45CHAIN 'F' AND (RESID 394 THROUGH 421 )
46X-RAY DIFFRACTION46CHAIN 'G' AND (RESID 7 THROUGH 81 )
47X-RAY DIFFRACTION47CHAIN 'G' AND (RESID 82 THROUGH 125 )
48X-RAY DIFFRACTION48CHAIN 'G' AND (RESID 126 THROUGH 172 )
49X-RAY DIFFRACTION49CHAIN 'G' AND (RESID 173 THROUGH 201 )
50X-RAY DIFFRACTION50CHAIN 'G' AND (RESID 202 THROUGH 226 )
51X-RAY DIFFRACTION51CHAIN 'G' AND (RESID 227 THROUGH 256 )
52X-RAY DIFFRACTION52CHAIN 'G' AND (RESID 257 THROUGH 305 )
53X-RAY DIFFRACTION53CHAIN 'G' AND (RESID 306 THROUGH 393 )
54X-RAY DIFFRACTION54CHAIN 'G' AND (RESID 394 THROUGH 421 )
55X-RAY DIFFRACTION55CHAIN 'H' AND (RESID 7 THROUGH 81 )
56X-RAY DIFFRACTION56CHAIN 'H' AND (RESID 82 THROUGH 125 )
57X-RAY DIFFRACTION57CHAIN 'H' AND (RESID 126 THROUGH 209 )
58X-RAY DIFFRACTION58CHAIN 'H' AND (RESID 210 THROUGH 237 )
59X-RAY DIFFRACTION59CHAIN 'H' AND (RESID 238 THROUGH 273 )
60X-RAY DIFFRACTION60CHAIN 'H' AND (RESID 274 THROUGH 298 )
61X-RAY DIFFRACTION61CHAIN 'H' AND (RESID 299 THROUGH 393 )
62X-RAY DIFFRACTION62CHAIN 'H' AND (RESID 394 THROUGH 421 )
63X-RAY DIFFRACTION63CHAIN 'I' AND (RESID 7 THROUGH 96 )
64X-RAY DIFFRACTION64CHAIN 'I' AND (RESID 97 THROUGH 142 )
65X-RAY DIFFRACTION65CHAIN 'I' AND (RESID 143 THROUGH 209 )
66X-RAY DIFFRACTION66CHAIN 'I' AND (RESID 210 THROUGH 256 )
67X-RAY DIFFRACTION67CHAIN 'I' AND (RESID 257 THROUGH 305 )
68X-RAY DIFFRACTION68CHAIN 'I' AND (RESID 306 THROUGH 393 )
69X-RAY DIFFRACTION69CHAIN 'I' AND (RESID 394 THROUGH 421 )
70X-RAY DIFFRACTION70CHAIN 'J' AND (RESID 7 THROUGH 81 )
71X-RAY DIFFRACTION71CHAIN 'J' AND (RESID 82 THROUGH 110 )
72X-RAY DIFFRACTION72CHAIN 'J' AND (RESID 111 THROUGH 172 )
73X-RAY DIFFRACTION73CHAIN 'J' AND (RESID 173 THROUGH 225 )
74X-RAY DIFFRACTION74CHAIN 'J' AND (RESID 226 THROUGH 255 )
75X-RAY DIFFRACTION75CHAIN 'J' AND (RESID 256 THROUGH 298 )
76X-RAY DIFFRACTION76CHAIN 'J' AND (RESID 299 THROUGH 393 )
77X-RAY DIFFRACTION77CHAIN 'J' AND (RESID 394 THROUGH 421 )
78X-RAY DIFFRACTION78CHAIN 'K' AND (RESID 7 THROUGH 71 )
79X-RAY DIFFRACTION79CHAIN 'K' AND (RESID 72 THROUGH 153 )
80X-RAY DIFFRACTION80CHAIN 'K' AND (RESID 154 THROUGH 209 )
81X-RAY DIFFRACTION81CHAIN 'K' AND (RESID 210 THROUGH 256 )
82X-RAY DIFFRACTION82CHAIN 'K' AND (RESID 257 THROUGH 305 )
83X-RAY DIFFRACTION83CHAIN 'K' AND (RESID 306 THROUGH 388 )
84X-RAY DIFFRACTION84CHAIN 'K' AND (RESID 389 THROUGH 421 )
85X-RAY DIFFRACTION85CHAIN 'L' AND (RESID 7 THROUGH 81 )
86X-RAY DIFFRACTION86CHAIN 'L' AND (RESID 82 THROUGH 125 )
87X-RAY DIFFRACTION87CHAIN 'L' AND (RESID 126 THROUGH 172 )
88X-RAY DIFFRACTION88CHAIN 'L' AND (RESID 173 THROUGH 226 )
89X-RAY DIFFRACTION89CHAIN 'L' AND (RESID 227 THROUGH 256 )
90X-RAY DIFFRACTION90CHAIN 'L' AND (RESID 257 THROUGH 305 )
91X-RAY DIFFRACTION91CHAIN 'L' AND (RESID 306 THROUGH 393 )
92X-RAY DIFFRACTION92CHAIN 'L' AND (RESID 394 THROUGH 421 )
93X-RAY DIFFRACTION93CHAIN 'M' AND (RESID 7 THROUGH 81 )
94X-RAY DIFFRACTION94CHAIN 'M' AND (RESID 82 THROUGH 125 )
95X-RAY DIFFRACTION95CHAIN 'M' AND (RESID 126 THROUGH 209 )
96X-RAY DIFFRACTION96CHAIN 'M' AND (RESID 210 THROUGH 237 )
97X-RAY DIFFRACTION97CHAIN 'M' AND (RESID 238 THROUGH 298 )
98X-RAY DIFFRACTION98CHAIN 'M' AND (RESID 299 THROUGH 393 )
99X-RAY DIFFRACTION99CHAIN 'M' AND (RESID 394 THROUGH 421 )
100X-RAY DIFFRACTION100CHAIN 'N' AND (RESID 7 THROUGH 153 )
101X-RAY DIFFRACTION101CHAIN 'N' AND (RESID 154 THROUGH 209 )
102X-RAY DIFFRACTION102CHAIN 'N' AND (RESID 210 THROUGH 256 )
103X-RAY DIFFRACTION103CHAIN 'N' AND (RESID 257 THROUGH 305 )
104X-RAY DIFFRACTION104CHAIN 'N' AND (RESID 306 THROUGH 393 )
105X-RAY DIFFRACTION105CHAIN 'N' AND (RESID 394 THROUGH 421 )
106X-RAY DIFFRACTION106CHAIN 'O' AND (RESID 7 THROUGH 81 )
107X-RAY DIFFRACTION107CHAIN 'O' AND (RESID 82 THROUGH 125 )
108X-RAY DIFFRACTION108CHAIN 'O' AND (RESID 126 THROUGH 153 )
109X-RAY DIFFRACTION109CHAIN 'O' AND (RESID 154 THROUGH 209 )
110X-RAY DIFFRACTION110CHAIN 'O' AND (RESID 210 THROUGH 237 )
111X-RAY DIFFRACTION111CHAIN 'O' AND (RESID 238 THROUGH 273 )
112X-RAY DIFFRACTION112CHAIN 'O' AND (RESID 274 THROUGH 298 )
113X-RAY DIFFRACTION113CHAIN 'O' AND (RESID 299 THROUGH 354 )
114X-RAY DIFFRACTION114CHAIN 'O' AND (RESID 355 THROUGH 393 )
115X-RAY DIFFRACTION115CHAIN 'O' AND (RESID 394 THROUGH 421 )
116X-RAY DIFFRACTION116CHAIN 'P' AND (RESID 7 THROUGH 96 )
117X-RAY DIFFRACTION117CHAIN 'P' AND (RESID 97 THROUGH 125 )
118X-RAY DIFFRACTION118CHAIN 'P' AND (RESID 126 THROUGH 209 )
119X-RAY DIFFRACTION119CHAIN 'P' AND (RESID 210 THROUGH 237 )
120X-RAY DIFFRACTION120CHAIN 'P' AND (RESID 238 THROUGH 340 )
121X-RAY DIFFRACTION121CHAIN 'P' AND (RESID 341 THROUGH 393 )
122X-RAY DIFFRACTION122CHAIN 'P' AND (RESID 394 THROUGH 421 )
123X-RAY DIFFRACTION123CHAIN 'Q' AND (RESID 7 THROUGH 91 )
124X-RAY DIFFRACTION124CHAIN 'Q' AND (RESID 92 THROUGH 125 )
125X-RAY DIFFRACTION125CHAIN 'Q' AND (RESID 126 THROUGH 226 )
126X-RAY DIFFRACTION126CHAIN 'Q' AND (RESID 227 THROUGH 255 )
127X-RAY DIFFRACTION127CHAIN 'Q' AND (RESID 256 THROUGH 298 )
128X-RAY DIFFRACTION128CHAIN 'Q' AND (RESID 299 THROUGH 393 )
129X-RAY DIFFRACTION129CHAIN 'Q' AND (RESID 394 THROUGH 421 )
130X-RAY DIFFRACTION130CHAIN 'R' AND (RESID 7 THROUGH 96 )
131X-RAY DIFFRACTION131CHAIN 'R' AND (RESID 97 THROUGH 142 )
132X-RAY DIFFRACTION132CHAIN 'R' AND (RESID 143 THROUGH 209 )
133X-RAY DIFFRACTION133CHAIN 'R' AND (RESID 210 THROUGH 256 )
134X-RAY DIFFRACTION134CHAIN 'R' AND (RESID 257 THROUGH 305 )
135X-RAY DIFFRACTION135CHAIN 'R' AND (RESID 306 THROUGH 393 )
136X-RAY DIFFRACTION136CHAIN 'R' AND (RESID 394 THROUGH 421 )
137X-RAY DIFFRACTION137CHAIN 'Z' AND (RESID 7 THROUGH 91 )
138X-RAY DIFFRACTION138CHAIN 'Z' AND (RESID 92 THROUGH 142 )
139X-RAY DIFFRACTION139CHAIN 'Z' AND (RESID 143 THROUGH 209 )
140X-RAY DIFFRACTION140CHAIN 'Z' AND (RESID 210 THROUGH 256 )
141X-RAY DIFFRACTION141CHAIN 'Z' AND (RESID 257 THROUGH 305 )
142X-RAY DIFFRACTION142CHAIN 'Z' AND (RESID 306 THROUGH 393 )
143X-RAY DIFFRACTION143CHAIN 'Z' AND (RESID 394 THROUGH 421 )
144X-RAY DIFFRACTION144CHAIN 'T' AND (RESID 7 THROUGH 71 )
145X-RAY DIFFRACTION145CHAIN 'T' AND (RESID 72 THROUGH 125 )
146X-RAY DIFFRACTION146CHAIN 'T' AND (RESID 126 THROUGH 209 )
147X-RAY DIFFRACTION147CHAIN 'T' AND (RESID 210 THROUGH 237 )
148X-RAY DIFFRACTION148CHAIN 'T' AND (RESID 238 THROUGH 273 )
149X-RAY DIFFRACTION149CHAIN 'T' AND (RESID 274 THROUGH 298 )
150X-RAY DIFFRACTION150CHAIN 'T' AND (RESID 299 THROUGH 393 )
151X-RAY DIFFRACTION151CHAIN 'T' AND (RESID 394 THROUGH 421 )

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