[English] 日本語
Yorodumi- PDB-5udv: LarE, a sulfur transferase involved in synthesis of the cofactor ... -
+Open data
-Basic information
Entry | Database: PDB / ID: 5udv | ||||||
---|---|---|---|---|---|---|---|
Title | LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, in complex with iron | ||||||
Components | Lactate racemization operon protein LarE | ||||||
Keywords | TRANSFERASE / Lar / sulfur transferase / LarE / AMPylation / hexamer / trimer / PP-loop / ATP pyrophophatase domain / lactate / lactate racemization / lactate racemase | ||||||
Function / homology | Function and homology information pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase / sulfurtransferase activity / lyase activity / ATP binding Similarity search - Function | ||||||
Biological species | Lactobacillus plantarum (bacteria) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / molecular replacement / Resolution: 2.621 Å | ||||||
Authors | Fellner, M. / Desguin, B. / Hausinger, R.P. / Hu, J. | ||||||
Funding support | United States, 1items
| ||||||
Citation | Journal: Proc. Natl. Acad. Sci. U.S.A. / Year: 2017 Title: Structural insights into the catalytic mechanism of a sacrificial sulfur insertase of the N-type ATP pyrophosphatase family, LarE. Authors: Fellner, M. / Desguin, B. / Hausinger, R.P. / Hu, J. | ||||||
History |
|
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
---|
-Downloads & links
-Download
PDBx/mmCIF format | 5udv.cif.gz | 593.7 KB | Display | PDBx/mmCIF format |
---|---|---|---|---|
PDB format | pdb5udv.ent.gz | 493.4 KB | Display | PDB format |
PDBx/mmJSON format | 5udv.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 5udv_validation.pdf.gz | 505 KB | Display | wwPDB validaton report |
---|---|---|---|---|
Full document | 5udv_full_validation.pdf.gz | 520.4 KB | Display | |
Data in XML | 5udv_validation.xml.gz | 52.4 KB | Display | |
Data in CIF | 5udv_validation.cif.gz | 71.1 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ud/5udv ftp://data.pdbj.org/pub/pdb/validation_reports/ud/5udv | HTTPS FTP |
-Related structure data
Related structure data | 5udqSC 5udrC 5udsC 5udtC 5uduC 5udwC 5udxC 5unmC S: Starting model for refinement C: citing same article (ref.) |
---|---|
Similar structure data |
-Links
-Assembly
Deposited unit |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Unit cell |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
|