Entry Database : PDB / ID : 5t4x Structure visualization Downloads & linksTitle CRYSTAL STRUCTURE OF PDE6D IN APO-STATE ComponentsRetinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta Details Keywords TRANSPORT PROTEIN / IMMUNOGLOBULIN-LIKE BETA SANDWITCH / PDE6 DELTA / FARNESYL / LIPID BINDING PROTEIN / PRENYL BINDING PROTEIN / GERANYLGERANYL / PHOSPHODIESTERASE 6 / RHODOPSIN / MEMBRANE DISSOCIATION / APO-STATE / MEMBRANE TRAFFICKING / CELLULAR TRAFFICKING / RHODOPSIN KINASE / RAS-GTPASEFunction / homology Function and homology informationFunction Domain/homology Component
ARL13B-mediated ciliary trafficking of INPP5E / RAS processing / GTPase inhibitor activity / phototransduction / 3',5'-cyclic-GMP phosphodiesterase activity / visual perception / cell projection / cytoplasmic vesicle membrane / small GTPase binding / cytoplasmic vesicle ... ARL13B-mediated ciliary trafficking of INPP5E / RAS processing / GTPase inhibitor activity / phototransduction / 3',5'-cyclic-GMP phosphodiesterase activity / visual perception / cell projection / cytoplasmic vesicle membrane / small GTPase binding / cytoplasmic vesicle / cytoskeleton / cytoplasm / cytosol Similarity search - Function GMP phosphodiesterase, delta subunit / Retinal rod rhodopsin-sensitive cGMP 3', 5'-cyclic phosphodiesterase, delta subunit / GMP phosphodiesterase, delta subunit / GMP phosphodiesterase, delta subunit superfamily / GMP-PDE, delta subunit / Coagulation Factor XIII; Chain A, domain 1 / Distorted Sandwich / Immunoglobulin E-set / Mainly Beta Similarity search - Domain/homologyBiological species Mus musculus (house mouse)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 1.81 Å DetailsAuthors Qureshi, B.M. / Schmidt, A. / Scheerer, P. CitationJournal : Nat Commun / Year : 2018Title : Mechanistic insights into the role of prenyl-binding protein PrBP/ delta in membrane dissociation of phosphodiesterase 6.Authors : Qureshi, B.M. / Schmidt, A. / Behrmann, E. / Burger, J. / Mielke, T. / Spahn, C.M.T. / Heck, M. / Scheerer, P. History Deposition Aug 30, 2016 Deposition site : PDBE / Processing site : PDBERevision 1.0 Jan 10, 2018 Provider : repository / Type : Initial releaseRevision 1.1 Jan 17, 2018 Group : Database references / Category : citation / citation_authorItem : _citation.journal_volume / _citation.page_first ... _citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_PubMed / _citation.title Revision 1.2 Jan 17, 2024 Group : Data collection / Database references / Refinement descriptionCategory : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession
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