- PDB-5oyk: Outer-membrane expressed OmpT of Vibrio cholerae -
+
Open data
ID or keywords:
Loading...
-
Basic information
Entry
Database: PDB / ID: 5oyk
Title
Outer-membrane expressed OmpT of Vibrio cholerae
Components
Gram-negative porin family protein
Keywords
MEMBRANE PROTEIN / Outer membrane protein / Porin / OmpF or OmpC ortholog / ion-transport / membrane beta barrel / ion-channel
Function / homology
Gram-negative porin / Porin domain, Gram-negative type / : / Porin domain superfamily / porin activity / pore complex / monoatomic ion transport / cell outer membrane / OmpT protein
Resolution: 3.2→46.41 Å / Cor.coef. Fo:Fc: 0.872 / Cor.coef. Fo:Fc free: 0.863 / SU B: 18.991 / SU ML: 0.332 / Cross valid method: THROUGHOUT / ESU R Free: 0.597 / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.24435
323
4.9 %
RANDOM
Rwork
0.21227
-
-
-
obs
0.21381
6206
59.26 %
-
Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å