Entry Database : PDB / ID : 5owp Structure visualization Downloads & linksTitle Crystal structure of glycopeptide "GVTSAfPDT*RPAP" in complex with scFv-SM3 Components5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINE Ig heavy chain V-III region J606,Ig lambda-1 chain V region H2020 DetailsKeywords IMMUNE SYSTEMFunction / homology Function and homology informationFunction Domain/homology Component
immunoglobulin complex / immunoglobulin mediated immune response / antigen binding / adaptive immune response / immune response / extracellular space Similarity search - Function : / Immunoglobulin V-Type / Immunoglobulin V-set domain / Immunoglobulin V-set domain / Immunoglobulin subtype / Immunoglobulin / Ig-like domain profile. / Immunoglobulin-like domain / Immunoglobulin-like domain superfamily / Immunoglobulins ... : / Immunoglobulin V-Type / Immunoglobulin V-set domain / Immunoglobulin V-set domain / Immunoglobulin subtype / Immunoglobulin / Ig-like domain profile. / Immunoglobulin-like domain / Immunoglobulin-like domain superfamily / Immunoglobulins / Immunoglobulin-like fold / Immunoglobulin-like / Sandwich / Mainly Beta Similarity search - Domain/homologyBiological species Mus musculus (house mouse)synthetic construct (others) Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 1.85 Å DetailsAuthors Bermejo, I.A. / Albuquerque, I.S. / Somovilla, V.J. / Martinez-Saez, N. / Castro-Lopez, J. / Garcia-Martin, F. / Hinou, H. / Nishimura, S. / Jimenez-Barbero, J. / Asensio, J.L. ...Bermejo, I.A. / Albuquerque, I.S. / Somovilla, V.J. / Martinez-Saez, N. / Castro-Lopez, J. / Garcia-Martin, F. / Hinou, H. / Nishimura, S. / Jimenez-Barbero, J. / Asensio, J.L. / Avenoza, A. / Busto, J.H. / Hurtado-Guerrero, R. / Peregrina, J.M. / Bernardes, G.J. / Corzana, F. CitationJournal : J. Am. Chem. Soc. / Year : 2017Title : The Use of Fluoroproline in MUC1 Antigen Enables Efficient Detection of Antibodies in Patients with Prostate Cancer.Authors: Somovilla, V.J. / Bermejo, I.A. / Albuquerque, I.S. / Martinez-Saez, N. / Castro-Lopez, J. / Garcia-Martin, F. / Companon, I. / Hinou, H. / Nishimura, S.I. / Jimenez-Barbero, J. / Asensio, J. ... Authors : Somovilla, V.J. / Bermejo, I.A. / Albuquerque, I.S. / Martinez-Saez, N. / Castro-Lopez, J. / Garcia-Martin, F. / Companon, I. / Hinou, H. / Nishimura, S.I. / Jimenez-Barbero, J. / Asensio, J.L. / Avenoza, A. / Busto, J.H. / Hurtado-Guerrero, R. / Peregrina, J.M. / Bernardes, G.J.L. / Corzana, F. History Deposition Sep 2, 2017 Deposition site : PDBE / Processing site : PDBERevision 1.0 Dec 13, 2017 Provider : repository / Type : Initial releaseRevision 1.1 Dec 27, 2017 Group : Database references / Category : citation / citation_authorItem : _citation.journal_volume / _citation.page_first ... _citation.journal_volume / _citation.page_first / _citation.page_last / _citation.title / _citation_author.name Revision 2.0 Jul 29, 2020 Group : Atomic model / Data collection ... Atomic model / Data collection / Derived calculations / Structure summary Category : atom_site / chem_comp ... atom_site / chem_comp / entity / pdbx_chem_comp_identifier / pdbx_entity_nonpoly / struct_conn / struct_site / struct_site_gen Item : _atom_site.auth_atom_id / _atom_site.label_atom_id ... _atom_site.auth_atom_id / _atom_site.label_atom_id / _chem_comp.name / _chem_comp.type / _entity.pdbx_description / _pdbx_entity_nonpoly.name / _struct_conn.pdbx_role Description : Carbohydrate remediation / Provider : repository / Type : RemediationRevision 2.1 Jan 17, 2024 Group : Data collection / Database references ... Data collection / Database references / Derived calculations / Refinement description / Structure summary Category : chem_comp / chem_comp_atom ... chem_comp / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_conn Item : _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI ... _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.pdbx_leaving_atom_flag
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