Entry | Database: PDB / ID: 5o9i |
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Title | Crystal structure of transcription factor IIB Mvu mini-intein |
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Components | Transcription initiation factor IIB,Transcription initiation factor IIB |
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Keywords | TRANSCRIPTION / Transcription factor IIB / Mini-intein / HINT fold |
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Function / homology | Function and homology information
transcription preinitiation complex assembly / intein-mediated protein splicing / TBP-class protein binding / endonuclease activity / DNA-binding transcription factor activity / zinc ion bindingSimilarity search - Function Transcription initiation factor TFIIB, archaea / Endonuclease - Pi-scei; Chain A, domain 1 / Hedgehog/Intein (Hint) domain / Intein splicing domain / Intein / Intein DOD homing endonuclease / Intein DOD-type homing endonuclease domain profile. / Intein C-terminal splicing region / Intein C-terminal splicing motif profile. / Hint domain C-terminal ...Transcription initiation factor TFIIB, archaea / Endonuclease - Pi-scei; Chain A, domain 1 / Hedgehog/Intein (Hint) domain / Intein splicing domain / Intein / Intein DOD homing endonuclease / Intein DOD-type homing endonuclease domain profile. / Intein C-terminal splicing region / Intein C-terminal splicing motif profile. / Hint domain C-terminal / Hint (Hedgehog/Intein) domain C-terminal region / Intein N-terminal splicing region / Intein N-terminal splicing motif profile. / Transcription factor TFIIB, cyclin-like domain / Transcription factor TFIIB, conserved site / Transcription factor TFIIB repeat / Transcription factor TFIIB repeat signature. / Hint domain N-terminal / Hint (Hedgehog/Intein) domain N-terminal region / Transcription factor TFIIB / Zinc finger TFIIB-type profile. / Hint domain superfamily / Zinc finger, TFIIB-type / TFIIB zinc-binding / Cyclin-like / domain present in cyclins, TFIIB and Retinoblastoma / Cyclin-like superfamily / Beta Complex / Mainly BetaSimilarity search - Domain/homology |
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Biological species | Methanocaldococcus vulcanius (archaea) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.5 Å |
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Authors | Mikula, K.M. / Iwai, H. / Li, M. / Wlodawer, A. |
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Funding support | Finland, United States, 3items Organization | Grant number | Country |
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Academy of Finland | 1131413 | Finland | Academy of Finland | 137995 | Finland | National Institutes of Health/National Cancer Institute (NIH/NCI) | HHSN261200800001E | United States |
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Citation | Journal: J. Mol. Biol. / Year: 2017 Title: Structural Basis for the Persistence of Homing Endonucleases in Transcription Factor IIB Inteins. Authors: Iwai, H. / Mikula, K.M. / Oeemig, J.S. / Zhou, D. / Li, M. / Wlodawer, A. |
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History | Deposition | Jun 19, 2017 | Deposition site: PDBE / Processing site: PDBE |
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Revision 1.0 | Nov 1, 2017 | Provider: repository / Type: Initial release |
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Revision 1.1 | Dec 6, 2017 | Group: Database references / Category: citation Item: _citation.journal_volume / _citation.page_first ..._citation.journal_volume / _citation.page_first / _citation.page_last / _citation.title |
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Revision 1.2 | Mar 30, 2022 | Group: Author supporting evidence / Database references / Category: database_2 / pdbx_audit_support Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_audit_support.funding_organization |
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Revision 1.3 | Jun 19, 2024 | Group: Data collection / Category: chem_comp_atom / chem_comp_bond |
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