登録情報 | データベース: PDB / ID: 5nin |
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タイトル | Crystal Structure of AKAP79 calmodulin binding domain peptide in complex with Ca2+/Calmodulin |
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要素 | - A-kinase anchor protein 5
- Calmodulin
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キーワード | SIGNALING PROTEIN / Calmodulin / Calcium / AKAP79 / AKAP150 / AKAP5 / AKAP / EF hand / Ca2+ |
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機能・相同性 | 機能・相同性情報
positive regulation of endosome to plasma membrane protein transport / postsynaptic recycling endosome membrane / protein serine/threonine phosphatase complex / postsynaptic recycling endosome / positive regulation of calcium ion import across plasma membrane / ROBO receptors bind AKAP5 / calcineurin-NFAT signaling cascade / : / GABA receptor binding / positive regulation of calcineurin-NFAT signaling cascade ...positive regulation of endosome to plasma membrane protein transport / postsynaptic recycling endosome membrane / protein serine/threonine phosphatase complex / postsynaptic recycling endosome / positive regulation of calcium ion import across plasma membrane / ROBO receptors bind AKAP5 / calcineurin-NFAT signaling cascade / : / GABA receptor binding / positive regulation of calcineurin-NFAT signaling cascade / establishment of protein localization to mitochondrial membrane / regulation of protein kinase A signaling / negative regulation of adenylate cyclase activity / type 3 metabotropic glutamate receptor binding / protein phosphatase 2B binding / Trafficking of AMPA receptors / CaM pathway / Cam-PDE 1 activation / Sodium/Calcium exchangers / regulation of synaptic vesicle endocytosis / Calmodulin induced events / Reduction of cytosolic Ca++ levels / CREB1 phosphorylation through the activation of CaMKII/CaMKK/CaMKIV cascasde / Activation of Ca-permeable Kainate Receptor / Loss of phosphorylation of MECP2 at T308 / protein kinase A binding / CREB1 phosphorylation through the activation of Adenylate Cyclase / PKA activation / negative regulation of high voltage-gated calcium channel activity / CaMK IV-mediated phosphorylation of CREB / Glycogen breakdown (glycogenolysis) / positive regulation of cyclic-nucleotide phosphodiesterase activity / organelle localization by membrane tethering / negative regulation of calcium ion export across plasma membrane / regulation of synaptic vesicle exocytosis / CLEC7A (Dectin-1) induces NFAT activation / regulation of cardiac muscle cell action potential / mitochondrion-endoplasmic reticulum membrane tethering / autophagosome membrane docking / Activation of RAC1 downstream of NMDARs / response to corticosterone / nitric-oxide synthase binding / positive regulation of ryanodine-sensitive calcium-release channel activity / regulation of cell communication by electrical coupling involved in cardiac conduction / Negative regulation of NMDA receptor-mediated neuronal transmission / negative regulation of peptidyl-threonine phosphorylation / Synthesis of IP3 and IP4 in the cytosol / Unblocking of NMDA receptors, glutamate binding and activation / Phase 0 - rapid depolarisation / protein kinase A regulatory subunit binding / protein phosphatase activator activity / RHO GTPases activate PAKs / positive regulation of phosphoprotein phosphatase activity / Ion transport by P-type ATPases / Long-term potentiation / Uptake and function of anthrax toxins / Calcineurin activates NFAT / Regulation of MECP2 expression and activity / adenylate cyclase binding / excitatory synapse / catalytic complex / DARPP-32 events / detection of calcium ion / regulation of cardiac muscle contraction / negative regulation of ryanodine-sensitive calcium-release channel activity / Smooth Muscle Contraction / RHO GTPases activate IQGAPs / calcium channel inhibitor activity / cellular response to interferon-beta / positive regulation of DNA binding / glutamate receptor binding / regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion / Protein methylation / phosphatidylinositol 3-kinase binding / eNOS activation / Activation of AMPK downstream of NMDARs / regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum / enzyme regulator activity / beta-2 adrenergic receptor binding / Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation / positive regulation of protein dephosphorylation / Ion homeostasis / regulation of calcium-mediated signaling / regulation of ryanodine-sensitive calcium-release channel activity / titin binding / positive regulation of protein autophosphorylation / voltage-gated potassium channel complex / sperm midpiece / dendrite membrane / calcium channel complex / response to amphetamine / activation of adenylate cyclase activity / substantia nigra development / adenylate cyclase activator activity / Ras activation upon Ca2+ influx through NMDA receptor / nitric-oxide synthase regulator activity / adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway / regulation of heart rate / sarcomere / protein serine/threonine kinase activator activity類似検索 - 分子機能 A kinase-anchoring protein AKAP5 and AKAP12, calmodulin (CaM)-binding motif / A-kinase anchor protein 5 / WSK motif / A kinase-anchoring proteins AKAP-5 and AKAP-12 calmodulin (CaM)-binding motif profile. / EF-hand domain pair / EF-hand, calcium binding motif / EF-Hand 1, calcium-binding site / EF-hand calcium-binding domain. / EF-hand calcium-binding domain profile. / EF-hand domain / EF-hand domain pair類似検索 - ドメイン・相同性 Calmodulin-1 / A-kinase anchor protein 5 / Calmodulin-3類似検索 - 構成要素 |
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生物種 | Homo sapiens (ヒト) |
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手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 1.7 Å |
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データ登録者 | Gold, M.G. / Patel, N. |
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資金援助 | 英国, 3件 組織 | 認可番号 | 国 |
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Wellcome Trust | 104194/Z/14/Z | 英国 | Royal Society | 104194/Z/14/Z | 英国 | Biotechnology and Biological Sciences Research Council | BB/N015274/1 | 英国 |
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引用 | ジャーナル: Nat Commun / 年: 2017 タイトル: Molecular basis of AKAP79 regulation by calmodulin. 著者: Patel, N. / Stengel, F. / Aebersold, R. / Gold, M.G. |
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履歴 | 登録 | 2017年3月24日 | 登録サイト: PDBE / 処理サイト: PDBE |
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改定 1.0 | 2017年12月6日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2024年1月17日 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_conn Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.pdbx_dist_value / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id |
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