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データを開く
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基本情報
登録情報 | データベース: PDB / ID: 5l7b | ||||||
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タイトル | Solution structure of the human SNF5/INI1 domain | ||||||
![]() | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 | ||||||
![]() | DNA BINDING PROTEIN / SNF5/INI1 NMR structure | ||||||
機能・相同性 | ![]() single stranded viral RNA replication via double stranded DNA intermediate / positive regulation of glucose mediated signaling pathway / positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter / blastocyst hatching / bBAF complex / positive regulation of transcription of nucleolar large rRNA by RNA polymerase I / npBAF complex / Tat protein binding / brahma complex / nBAF complex ...single stranded viral RNA replication via double stranded DNA intermediate / positive regulation of glucose mediated signaling pathway / positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter / blastocyst hatching / bBAF complex / positive regulation of transcription of nucleolar large rRNA by RNA polymerase I / npBAF complex / Tat protein binding / brahma complex / nBAF complex / regulation of G0 to G1 transition / nucleosome disassembly / regulation of nucleotide-excision repair / hepatocyte differentiation / XY body / RSC-type complex / RNA polymerase I preinitiation complex assembly / positive regulation by host of viral transcription / regulation of mitotic metaphase/anaphase transition / SWI/SNF complex / positive regulation of double-strand break repair / germ cell nucleus / positive regulation of T cell differentiation / nuclear chromosome / positive regulation of stem cell population maintenance / RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known / regulation of G1/S transition of mitotic cell cycle / positive regulation of myoblast differentiation / transcription initiation-coupled chromatin remodeling / positive regulation of cell differentiation / fibrillar center / kinetochore / RMTs methylate histone arginines / positive regulation of DNA-binding transcription factor activity / nuclear matrix / DNA integration / p53 binding / nervous system development / transcription coactivator activity / chromatin remodeling / cell cycle / negative regulation of cell population proliferation / intracellular membrane-bounded organelle / chromatin / nucleolus / regulation of transcription by RNA polymerase II / positive regulation of transcription by RNA polymerase II / protein-containing complex / DNA binding / nucleoplasm / identical protein binding / nucleus 類似検索 - 分子機能 | ||||||
生物種 | ![]() | ||||||
手法 | 溶液NMR / torsion angle dynamics | ||||||
![]() | Allen, M.D. / Zinzalla, G. / Bycroft, M. | ||||||
![]() | ![]() タイトル: The structure of INI1/hSNF5 RPT1 and its interactions with the c-MYC:MAX heterodimer provide insights into the interplay between MYC and the SWI/SNF chromatin remodeling complex. 著者: Sammak, S. / Allen, M.D. / Hamdani, N. / Bycroft, M. / Zinzalla, G. | ||||||
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構造の表示
構造ビューア | 分子: ![]() ![]() |
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ダウンロードとリンク
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ダウンロード
PDBx/mmCIF形式 | ![]() | 465.5 KB | 表示 | ![]() |
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PDB形式 | ![]() | 389.2 KB | 表示 | ![]() |
PDBx/mmJSON形式 | ![]() | ツリー表示 | ![]() | |
その他 | ![]() |
-検証レポート
文書・要旨 | ![]() | 400.1 KB | 表示 | ![]() |
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文書・詳細版 | ![]() | 529.6 KB | 表示 | |
XML形式データ | ![]() | 28.7 KB | 表示 | |
CIF形式データ | ![]() | 45.8 KB | 表示 | |
アーカイブディレクトリ | ![]() ![]() | HTTPS FTP |
-関連構造データ
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リンク
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集合体
登録構造単位 | ![]()
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NMR アンサンブル |
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要素
#1: タンパク質 | 分子量: 8821.944 Da / 分子数: 1 / 由来タイプ: 組換発現 / 由来: (組換発現) ![]() ![]() ![]() |
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-実験情報
-実験
実験 | 手法: 溶液NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR実験 |
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試料調製
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試料 |
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試料状態 | 詳細: 1.5mM protein in the standard buffer / イオン強度: 120 mM / Label: standard conditions / pH: 6.5 / 圧: 1 atm / 温度: 293 K |
-NMR測定
NMRスペクトロメーター |
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解析
NMR software |
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精密化 | 手法: torsion angle dynamics / ソフトェア番号: 2 | |||||||||||||||
代表構造 | 選択基準: closest to the average | |||||||||||||||
NMRアンサンブル | コンフォーマー選択の基準: all calculated structures submitted 計算したコンフォーマーの数: 20 / 登録したコンフォーマーの数: 20 |