- PDB-5kwa: complete structure of the Mycobacterium tuberculosis proteasomal ... -
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Basic information
Entry
Database: PDB / ID: 5kwa
Title
complete structure of the Mycobacterium tuberculosis proteasomal ATPase Mpa
Components
Proteasome-associated ATPase
Keywords
HYDROLASE / Proteasomal ATPase
Function / homology
Function and homology information
ubiquitin-like protein reader activity / symbiont defense to host-produced reactive oxygen species / proteasome-activating nucleotidase complex / symbiont-mediated perturbation of host defenses / response to nitrosative stress / proteasomal ubiquitin-independent protein catabolic process / ATP-dependent peptidase activity / protein unfolding / cellular response to nitric oxide / proteasomal protein catabolic process ...ubiquitin-like protein reader activity / symbiont defense to host-produced reactive oxygen species / proteasome-activating nucleotidase complex / symbiont-mediated perturbation of host defenses / response to nitrosative stress / proteasomal ubiquitin-independent protein catabolic process / ATP-dependent peptidase activity / protein unfolding / cellular response to nitric oxide / proteasomal protein catabolic process / proteasome complex / peptidoglycan-based cell wall / modification-dependent protein catabolic process / ATP hydrolysis activity / ATP binding / identical protein binding / plasma membrane Similarity search - Function
Proteasome ATPase / Proteasomal ATPase, N-terminal OB domain / Proteasomal ATPase OB N-terminal domain / Proteasomal ATPase OB C-terminal domain / Proteasomal ATPase OB C-terminal domain / : / ATPase, AAA-type, conserved site / AAA-protein family signature. / ATPase family associated with various cellular activities (AAA) / ATPase, AAA-type, core ...Proteasome ATPase / Proteasomal ATPase, N-terminal OB domain / Proteasomal ATPase OB N-terminal domain / Proteasomal ATPase OB C-terminal domain / Proteasomal ATPase OB C-terminal domain / : / ATPase, AAA-type, conserved site / AAA-protein family signature. / ATPase family associated with various cellular activities (AAA) / ATPase, AAA-type, core / ATPases associated with a variety of cellular activities / AAA+ ATPase domain / Nucleic acid-binding, OB-fold / P-loop containing nucleoside triphosphate hydrolase Similarity search - Domain/homology
Resolution: 2.9→43.45 Å / Cor.coef. Fo:Fc: 0.92 / Cor.coef. Fo:Fc free: 0.889 / SU B: 20.441 / SU ML: 0.353 / Cross valid method: THROUGHOUT / ESU R: 1.285 / ESU R Free: 0.384 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.26883
1543
4.8 %
RANDOM
Rwork
0.22786
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obs
0.22974
30678
99.89 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK