- PDB-5iio: Crystal structure of the DNA polymerase lambda binary complex -
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基本情報
登録情報
データベース: PDB / ID: 5iio
タイトル
Crystal structure of the DNA polymerase lambda binary complex
要素
DNA (5'-D(*CP*AP*GP*TP*AP*C)-3')
DNA (5'-D(*CP*GP*GP*CP*(8OG)P*GP*TP*AP*CP*TP*G)-3')
DNA (5'-D(P*GP*CP*CP*G)-3')
DNA polymerase lambda
キーワード
TRANSFERASE/DNA / TRANSFERASE-DNA COMPLEX
機能・相同性
機能・相同性情報
DNA biosynthetic process / 付加脱離酵素(リアーゼ); 炭素-酸素リアーゼ類; その他の炭素-酸素リアーゼ / 5'-deoxyribose-5-phosphate lyase activity / somatic hypermutation of immunoglobulin genes / base-excision repair, gap-filling / nucleotide-excision repair / Nonhomologous End-Joining (NHEJ) / double-strand break repair via homologous recombination / double-strand break repair via nonhomologous end joining / site of double-strand break ...DNA biosynthetic process / 付加脱離酵素(リアーゼ); 炭素-酸素リアーゼ類; その他の炭素-酸素リアーゼ / 5'-deoxyribose-5-phosphate lyase activity / somatic hypermutation of immunoglobulin genes / base-excision repair, gap-filling / nucleotide-excision repair / Nonhomologous End-Joining (NHEJ) / double-strand break repair via homologous recombination / double-strand break repair via nonhomologous end joining / site of double-strand break / DNA replication / DNA-directed DNA polymerase / DNA-directed DNA polymerase activity / DNA binding / nucleoplasm / nucleus / metal ion binding 類似検索 - 分子機能
Beta Polymerase; domain 3 / DNA polymerase, thumb domain / DNA polymerase family X, beta-like / DNA polymerase beta, N-terminal domain-like / DNA polymerase beta, palm domain / DNA polymerase beta palm / DNA polymerase lambda, fingers domain / Fingers domain of DNA polymerase lambda / DNA-directed DNA polymerase X / DNA polymerase beta-like, N-terminal domain ...Beta Polymerase; domain 3 / DNA polymerase, thumb domain / DNA polymerase family X, beta-like / DNA polymerase beta, N-terminal domain-like / DNA polymerase beta, palm domain / DNA polymerase beta palm / DNA polymerase lambda, fingers domain / Fingers domain of DNA polymerase lambda / DNA-directed DNA polymerase X / DNA polymerase beta-like, N-terminal domain / Helix-hairpin-helix domain / DNA polymerase X family / DNA polymerase lambda lyase domain superfamily / DNA polymerase family X, binding site / DNA polymerase family X signature. / DNA polymerase family X / DNA polymerase beta, thumb domain / DNA polymerase beta thumb / DNA polymerase, thumb domain superfamily / Beta Polymerase, domain 2 / Beta Polymerase; domain 2 / BRCT domain profile. / BRCT domain / BRCT domain superfamily / Nucleotidyltransferase superfamily / 5' to 3' exonuclease, C-terminal subdomain / DNA polymerase; domain 1 / 2-Layer Sandwich / Orthogonal Bundle / Mainly Alpha / Alpha Beta 類似検索 - ドメイン・相同性
DNA / DNA (> 10) / DNA polymerase lambda 類似検索 - 構成要素
#241 - 2020年1月 20年の分子を振り返って (Twenty Years of Molecules) 類似性 (2)
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B: DNA (5'-D(*CP*GP*GP*CP*(8OG)P*GP*TP*AP*CP*TP*G)-3') C: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3') D: DNA (5'-D(P*GP*CP*CP*G)-3') F: DNA (5'-D(*CP*GP*GP*CP*(8OG)P*GP*TP*AP*CP*TP*G)-3') G: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3') H: DNA (5'-D(P*GP*CP*CP*G)-3') J: DNA (5'-D(*CP*GP*GP*CP*(8OG)P*GP*TP*AP*CP*TP*G)-3') K: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3') L: DNA (5'-D(P*GP*CP*CP*G)-3') N: DNA (5'-D(*CP*GP*GP*CP*(8OG)P*GP*TP*AP*CP*TP*G)-3') O: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3') P: DNA (5'-D(P*GP*CP*CP*G)-3') A: DNA polymerase lambda E: DNA polymerase lambda I: DNA polymerase lambda M: DNA polymerase lambda ヘテロ分子
B: DNA (5'-D(*CP*GP*GP*CP*(8OG)P*GP*TP*AP*CP*TP*G)-3') C: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3') D: DNA (5'-D(P*GP*CP*CP*G)-3') A: DNA polymerase lambda ヘテロ分子
F: DNA (5'-D(*CP*GP*GP*CP*(8OG)P*GP*TP*AP*CP*TP*G)-3') G: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3') H: DNA (5'-D(P*GP*CP*CP*G)-3') E: DNA polymerase lambda ヘテロ分子
J: DNA (5'-D(*CP*GP*GP*CP*(8OG)P*GP*TP*AP*CP*TP*G)-3') K: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3') L: DNA (5'-D(P*GP*CP*CP*G)-3') I: DNA polymerase lambda ヘテロ分子
N: DNA (5'-D(*CP*GP*GP*CP*(8OG)P*GP*TP*AP*CP*TP*G)-3') O: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3') P: DNA (5'-D(P*GP*CP*CP*G)-3') M: DNA polymerase lambda ヘテロ分子