+Open data
-Basic information
Entry | Database: PDB / ID: 5gnj | ||||||
---|---|---|---|---|---|---|---|
Title | Structure of a transcription factor and DNA complex | ||||||
Components |
| ||||||
Keywords | DNA BINDING PROTEIN/DNA / Transcription factor / DNA / complex / DNA BINDING PROTEIN-DNA complex | ||||||
Function / homology | Function and homology information regulation of tryptophan metabolic process / regulation of defense response to insect / : / regulation of secondary cell wall biogenesis / response to desiccation / response to chitin / positive regulation of flavonoid biosynthetic process / extracellular ATP signaling / stomatal complex development / response to jasmonic acid ...regulation of tryptophan metabolic process / regulation of defense response to insect / : / regulation of secondary cell wall biogenesis / response to desiccation / response to chitin / positive regulation of flavonoid biosynthetic process / extracellular ATP signaling / stomatal complex development / response to jasmonic acid / response to abscisic acid / regulation of DNA-binding transcription factor activity / abscisic acid-activated signaling pathway / kinase binding / response to wounding / protein homotetramerization / sequence-specific DNA binding / protein dimerization activity / transcription cis-regulatory region binding / DNA-binding transcription factor activity / regulation of DNA-templated transcription / positive regulation of DNA-templated transcription / DNA binding / nucleus Similarity search - Function | ||||||
Biological species | Arabidopsis thaliana (thale cress) synthetic construct (others) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.7 Å | ||||||
Authors | Lian, T. / Xu, Y. / Su, X. | ||||||
Funding support | China, 1items
| ||||||
Citation | Journal: Cell Rep / Year: 2017 Title: Crystal Structure of Tetrameric Arabidopsis MYC2 Reveals the Mechanism of Enhanced Interaction with DNA. Authors: Lian, T.F. / Xu, Y.P. / Li, L.F. / Su, X.D. | ||||||
History |
|
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
---|
-Downloads & links
-Download
PDBx/mmCIF format | 5gnj.cif.gz | 367.4 KB | Display | PDBx/mmCIF format |
---|---|---|---|---|
PDB format | pdb5gnj.ent.gz | 297.2 KB | Display | PDB format |
PDBx/mmJSON format | 5gnj.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 5gnj_validation.pdf.gz | 531.9 KB | Display | wwPDB validaton report |
---|---|---|---|---|
Full document | 5gnj_full_validation.pdf.gz | 542.2 KB | Display | |
Data in XML | 5gnj_validation.xml.gz | 25 KB | Display | |
Data in CIF | 5gnj_validation.cif.gz | 36 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/gn/5gnj ftp://data.pdbj.org/pub/pdb/validation_reports/gn/5gnj | HTTPS FTP |
-Related structure data
Similar structure data |
---|
-Links
-Assembly
Deposited unit |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Unit cell |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Component-ID: 1
|