Entry | Database: PDB / ID: 5a3f |
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Title | Crystal structure of the dynamin tetramer |
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Components | DYNAMIN 3 |
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Keywords | ENDOCYTOSIS / MEMBRANE REMODELING / GTPASE |
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Function / homology | Function and homology information
type 1 metabotropic glutamate receptor binding / basal tubulobulbar complex / postsynaptic endocytic zone membrane / apical tubulobulbar complex / positive regulation of synaptic vesicle recycling / structural constituent of postsynapse / negative regulation of dendritic spine morphogenesis / dynamin GTPase / postsynaptic neurotransmitter receptor internalization / Toll Like Receptor 4 (TLR4) Cascade ...type 1 metabotropic glutamate receptor binding / basal tubulobulbar complex / postsynaptic endocytic zone membrane / apical tubulobulbar complex / positive regulation of synaptic vesicle recycling / structural constituent of postsynapse / negative regulation of dendritic spine morphogenesis / dynamin GTPase / postsynaptic neurotransmitter receptor internalization / Toll Like Receptor 4 (TLR4) Cascade / Retrograde neurotrophin signalling / filopodium assembly / type 5 metabotropic glutamate receptor binding / positive regulation of filopodium assembly / dendritic spine head / nitric-oxide synthase binding / Recycling pathway of L1 / synaptic vesicle endocytosis / synaptic cleft / protein serine/threonine kinase binding / synapse assembly / MHC class II antigen presentation / receptor internalization / endocytosis / presynapse / Clathrin-mediated endocytosis / microtubule binding / microtubule / dendritic spine / postsynaptic density / axon / GTPase activity / glutamatergic synapse / GTP binding / perinuclear region of cytoplasm / extracellular exosome / identical protein binding / plasma membrane / cytoplasmSimilarity search - Function Dynamin, middle domain / Dynamin GTPase effector / Dynamin GTPase effector domain / Dynamin GTPase effector domain / Dynamin, GTPase region, conserved site / Dynamin-type guanine nucleotide-binding (G) domain signature. / Dynamin stalk domain / Dynamin central region / GTPase effector domain / GED domain profile. ...Dynamin, middle domain / Dynamin GTPase effector / Dynamin GTPase effector domain / Dynamin GTPase effector domain / Dynamin, GTPase region, conserved site / Dynamin-type guanine nucleotide-binding (G) domain signature. / Dynamin stalk domain / Dynamin central region / GTPase effector domain / GED domain profile. / Dynamin, GTPase domain / Dynamin, GTPase / Dynamin / Dynamin-type guanine nucleotide-binding (G) domain / Dynamin-type guanine nucleotide-binding (G) domain profile. / Dynamin, N-terminal / Dynamin family / Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) / PH-domain like / PH domain / Four Helix Bundle (Hemerythrin (Met), subunit A) / PH domain profile. / Pleckstrin homology domain. / Pleckstrin homology domain / PH-like domain superfamily / Roll / Up-down Bundle / P-loop containing nucleoside triphosphate hydrolase / Mainly Beta / Mainly AlphaSimilarity search - Domain/homology |
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Biological species | HOMO SAPIENS (human) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.7 Å |
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Authors | Reubold, T.F. / Faelber, K. / Plattner, N. / Posor, Y. / Branz, K. / Curth, U. / Schlegel, J. / Anand, R. / Manstein, D.J. / Noe, F. ...Reubold, T.F. / Faelber, K. / Plattner, N. / Posor, Y. / Branz, K. / Curth, U. / Schlegel, J. / Anand, R. / Manstein, D.J. / Noe, F. / Haucke, V. / Daumke, O. / Eschenburg, S. |
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Citation | Journal: Nature / Year: 2015 Title: Crystal Structure of the Dynamin Tetramer Authors: Reubold, T.F. / Faelber, K. / Plattner, N. / Posor, Y. / Ketel, K. / Curth, U. / Schlegel, J. / Anand, R. / Manstein, D.J. / Noe, F. / Haucke, V. / Daumke, O. / Eschenburg, S. |
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History | Deposition | May 29, 2015 | Deposition site: PDBE / Processing site: PDBE |
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Revision 1.0 | Aug 26, 2015 | Provider: repository / Type: Initial release |
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Revision 1.1 | Sep 2, 2015 | Group: Database references |
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Revision 1.2 | Sep 23, 2015 | Group: Database references |
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Revision 1.3 | Jan 10, 2024 | Group: Data collection / Database references ...Data collection / Database references / Other / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_database_status / pdbx_initial_refinement_model Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.status_code_sf |
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Remark 650 | HELIX DETERMINATION METHOD: AUTHOR PROVIDED. |
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Remark 700 | SHEET DETERMINATION METHOD: AUTHOR PROVIDED. |
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