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- PDB-4qij: Crystal structure of MenB from Mycobacteria tuberculosis in compl... -

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Basic information

Entry
Database: PDB / ID: 4qij
TitleCrystal structure of MenB from Mycobacteria tuberculosis in complex with 1-HNA-CoA
Components1,4-Dihydroxy-2-naphthoyl-CoA synthase
KeywordsLYASE / 1 / 4-dihydroxy-2-naphthoyl-coenzyme A synthase / MenB / 1-HNA-CoA
Function / homology
Function and homology information


1,4-dihydroxy-2-naphthoyl-CoA synthase / 1,4-dihydroxy-2-naphthoyl-CoA synthase activity / menaquinone biosynthetic process / protein hexamerization / plasma membrane / cytosol
Similarity search - Function
1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB / Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 / Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 / Enoyl-CoA hydratase, C-terminal / Enoyl-CoA hydratase/isomerase / Enoyl-CoA hydratase/isomerase / 2-enoyl-CoA Hydratase; Chain A, domain 1 / 2-enoyl-CoA Hydratase; Chain A, domain 1 / ClpP/crotonase-like domain superfamily / Alpha-Beta Complex ...1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB / Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 / Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 / Enoyl-CoA hydratase, C-terminal / Enoyl-CoA hydratase/isomerase / Enoyl-CoA hydratase/isomerase / 2-enoyl-CoA Hydratase; Chain A, domain 1 / 2-enoyl-CoA Hydratase; Chain A, domain 1 / ClpP/crotonase-like domain superfamily / Alpha-Beta Complex / Orthogonal Bundle / Mainly Alpha / Alpha Beta
Similarity search - Domain/homology
1-hydroxy-2-naphthoyl-CoA / 1,4-dihydroxy-2-naphthoyl-CoA synthase
Similarity search - Component
Biological speciesMycobacterium tuberculosis H37Rv (bacteria)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.2 Å
AuthorsSong, H.G. / Sung, H.P. / Tse, Y.S. / Guo, Z.H.
CitationJournal: Acta Crystallogr.,Sect.D / Year: 2014
Title: Ligand-dependent active-site closure revealed in the crystal structure of Mycobacterium tuberculosis MenB complexed with product analogues
Authors: Song, H. / Sung, H.P. / Tse, Y.S. / Jiang, M. / Guo, Z.H.
History
DepositionMay 31, 2014Deposition site: RCSB / Processing site: PDBJ
Revision 1.0Nov 19, 2014Provider: repository / Type: Initial release
Revision 1.1Nov 8, 2023Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description
Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ref_seq_dif / struct_site
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ref_seq_dif.details / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
B: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
C: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
D: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
E: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
F: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
G: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
H: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
I: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
J: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
K: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
L: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)454,09224
Polymers442,84012
Non-polymers11,25212
Water45,2362511
1
A: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
B: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
C: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
D: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
E: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
F: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)227,04612
Polymers221,4206
Non-polymers5,6266
Water1086
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area41940 Å2
ΔGint-185 kcal/mol
Surface area50300 Å2
MethodPISA
2
G: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
H: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
I: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
J: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
K: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
L: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)227,04612
Polymers221,4206
Non-polymers5,6266
Water1086
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area41910 Å2
ΔGint-185 kcal/mol
Surface area50390 Å2
MethodPISA
Unit cell
Length a, b, c (Å)91.498, 148.315, 140.999
Angle α, β, γ (deg.)90.00, 103.47, 90.00
Int Tables number4
Space group name H-MP1211

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Components

#1: Protein
1,4-Dihydroxy-2-naphthoyl-CoA synthase / DHNA-CoA synthase


Mass: 36903.301 Da / Num. of mol.: 12
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Mycobacterium tuberculosis H37Rv (bacteria)
Plasmid: pET-28a / Production host: Escherichia coli BL21(DE3) (bacteria)
References: UniProt: P9WNP5, 1,4-dihydroxy-2-naphthoyl-CoA synthase
#2: Chemical
ChemComp-1HA / 1-hydroxy-2-naphthoyl-CoA


Mass: 937.698 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: C32H42N7O18P3S
#3: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 2511 / Source method: isolated from a natural source / Formula: H2O

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.1 Å3/Da / Density % sol: 41.46 %
Crystal growTemperature: 295 K / Method: vapor diffusion, hanging drop / pH: 8
Details: 0.3M NaCl, 0.1M Tris-HCl pH 8.0, 25% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 295K

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Data collection

DiffractionMean temperature: 100 K
Diffraction sourceSource: SYNCHROTRON / Site: SSRF / Beamline: BL17U / Wavelength: 0.9792 Å
DetectorType: ADSC QUANTUM 315r / Detector: CCD / Date: Oct 15, 2012
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.9792 Å / Relative weight: 1
ReflectionResolution: 2.2→46.58 Å / Num. obs: 175673 / Biso Wilson estimate: 18 Å2

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Processing

Software
NameVersionClassification
HKL-2000data collection
PHASERphasing
PHENIX(phenix.refine: 1.8.4_1496)refinement
MOSFLMdata reduction
SCALAdata scaling
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: 1Q52
Resolution: 2.2→46.58 Å / SU ML: 0.19 / σ(F): 1.35 / Phase error: 18.36 / Stereochemistry target values: ML
RfactorNum. reflection% reflection
Rfree0.1843 8822 5.02 %
Rwork0.1271 --
obs0.13 175649 94.93 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Refinement stepCycle: LAST / Resolution: 2.2→46.58 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms28074 0 732 2511 31317
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.00829545
X-RAY DIFFRACTIONf_angle_d1.08440191
X-RAY DIFFRACTIONf_dihedral_angle_d16.04110685
X-RAY DIFFRACTIONf_chiral_restr0.0464163
X-RAY DIFFRACTIONf_plane_restr0.0065282
LS refinement shell

Refine-ID: X-RAY DIFFRACTION / Total num. of bins used: 30

Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection Rwork% reflection obs (%)
2.2-2.2250.22082880.1378518689
2.225-2.25120.21622410.1414518789
2.2512-2.27860.21292870.1369524489
2.2786-2.30750.21382720.1289532591
2.3075-2.33780.20212820.1261530191
2.3378-2.36990.21242540.1282539992
2.3699-2.40370.20243030.1262544093
2.4037-2.43960.19492780.125540493
2.4396-2.47770.20432850.1311553294
2.4777-2.51830.20673070.1345552695
2.5183-2.56180.20573240.1348553695
2.5618-2.60830.20812970.1343559095
2.6083-2.65850.19662930.1404555896
2.6585-2.71280.22942720.1439559895
2.7128-2.77170.20632710.1403570697
2.7717-2.83620.20442900.1395560496
2.8362-2.90710.19363070.1405562697
2.9071-2.98570.19923250.1432563397
2.9857-3.07360.22432830.1461568797
3.0736-3.17270.21362870.1431569597
3.1727-3.28610.20493120.1375569697
3.2861-3.41760.18513000.1387567397
3.4176-3.57310.17713040.1299566197
3.5731-3.76140.16963150.1153559596
3.7614-3.9970.15233000.1117557095
3.997-4.30540.14282820.0999572597
4.3054-4.73830.1343090.096576298
4.7383-5.4230.16453210.1086581199
5.423-6.8290.1693050.132586399
6.829-46.59170.14853280.1283569495
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
10.04380.01910.01160.04270.00710.0260.0121-0.07910.0260.0218-0.0480.0363-0.0235-0.0871-0.00540.06040.01650.00710.0934-0.00090.064428.9932.2143194.3062
20.0029-00.00270.000900.00160.00880.00420.0094-0.0220.00740.01350.0165-0.03900.0828-0.0251-0.01150.1699-0.01550.133919.302-15.2171184.7302
30.0024-0.00510.00170.0058-0.0010.0028-0.0008-0.0142-0.0184-0.02530.0016-0.0259-0.027-0.010300.0455-0.00190.00830.06190.00010.047339.1801-5.4205188.0026
40.03040.0216-0.01730.0239-0.02120.0222-0.0043-0.0023-0.0058-0.00740.0254-0.02910.0097-0.0433-0.00160.03280.007-0.00470.044-0.00120.045749.9799-9.8901190.7708
50.00950.00040.00140.0016-0.00060.0011-0.00490.02030.0386-0.00810.0182-0.0349-0.0112-0.01850.00160.0641-0.00890.00450.04240.01110.03644.337910.7818187.7535
60.0103-0.0008-0.0049-0.00030.0030.00750.0488-0.0650.0224-0.0181-0.0449-0.0464-0.0675-0.0025-0.00010.15010.00660.020.07810.00750.090841.619119.8038160.8973
70.01110.0120.01030.01260.00760.04770.0410.0042-0.07650.02410.0324-0.04860.05750.09080.00210.10510.0164-0.01830.071-0.02010.130263.6242-37.5357184.1438
80.00060.00190.00420.00420.01140.02380.01290.0244-0.0297-0.0290.0115-0.00540.02360.0160.03870.06530.0181-0.00160.0254-0.05210.063357.426-34.5118175.4969
90.00270.0013-0.00050.00810.00220.00130.007-0.0002-0.0226-0.00090.0258-0.0290.02140.02560.00470.08510.047-0.00840.1196-0.02640.129275.6459-30.2473181.6629
100.00140.00210.00130.0020.00170.00170.02070.0226-0.0215-0.0194-0.01340.00790.02470.032100.17640.03820.01950.1985-0.05660.130176.2811-31.3221163.1314
110.02170.00110.00330.0193-0.00230.03110.0039-0.0042-0.0125-0.00820.0295-0.0210.00870.0380.02770.0410.01320.00060.0554-0.00870.054164.0881-21.2403178.7691
120.00650.0007-0.00340.0021-0.00220.0040.020.00960.00820.0283-0.00020.0186-0.00350.00410.01310.0572-0.00530.0070.028-0.00890.026665.6828-11.0388184.9262
130.0032-0.0016-0.00130.00040.0010.0031-0.0011-0.02170.00040.0233-0.00290.03430.00040.02630.00030.10750.01020.00660.06130.01060.089955.4331-28.3581193.1036
140.0032-0.0024-0.00270.00110.00150.0016-0.02820.0147-0.0319-0.0182-0.01970.0084-0.00010.017700.07090.0125-0.00220.0817-0.01150.087444.3625-20.4255177.9101
150.00130.00170.00130.00150.00140.0006-0.0033-0.00690.00370.0288-0.0087-0.01270.0256-0.0076-00.10210.0263-0.01580.09220.00190.084939.492-22.4195168.4498
160.0027-0.00250.0030.0027-0.00350.0033-0.0483-0.0048-0.0177-0.01130.03930.0222-0.0198-0.0172-00.1122-0.0138-0.010.06280.01970.16121.0848-25.9361163.1863
170.0593-0.02840.02040.02860.00790.0615-0.00020.02150.1105-0.005-0.016-0.0438-0.1010.0859-0.03270.0743-0.14070.0853-0.02620.0760.004276.963416.1075176.2404
180.0037-0.00050.00210.00230.00160.0027-0.0392-0.01350.0441-0.0502-0.0372-0.0034-0.00030.0086-0.00010.2269-0.02810.020.0970.02750.112360.941929.3421168.5244
190.0061-0.004-0.00470.0137-0.00120.00560.00050.03570.0221-0.0220.02480.0301-0.02090.00340.02290.0952-0.02580.00040.06410.00620.080667.02299.1328178.8746
200.01830.00320.00750.0047-0.00330.0087-0.01330.03830.0078-0.01240.00460.0081-0.02450.0245-0.00650.0489-0.00690.00870.0502-0.00810.044153.60257.4366180.7295
210.0107-0.0149-0.00330.0254-0.00690.0056-0.00330.0015-0.0173-0.0277-0.0106-0.0066-0.00990.0235-0.0020.083-0.01730.01360.0971-0.00020.074571.3946-0.0274181.5584
220.0015-0.00170.00210.0018-0.0020.0034-0.005-0.01230.00230.01770.00850.0146-0.01760.012500.1059-0.0191-0.00750.08460.01140.103965.7081-5.7356159.672
230.00520.00720.00550.00590.00560.00470.015-0.0398-0.0506-0.02420.0113-0.02180.01640.0015-00.1895-0.03270.05580.1903-0.04040.11874.3317-18.3204144.2367
240.03870.0144-0.03510.0053-0.01340.02880.01330.08020.0728-0.01830.03620.0195-0.07350.02470.07210.197-0.06110.08880.11390.07610.031366.245615.68138.9597
250.0045-00.00150.00160.00230.00050.02080.03350.039-0.00310.0388-0.026-0.02640.0292-00.1542-0.03410.02140.10940.00930.073865.490314.8513148.8278
260.00680.00990.00460.01390.00780.004-0.0010.0396-0.0045-0.01050.0187-0.0559-0.01780.00240.00010.2256-0.04950.05570.27480.00620.105969.75372.1643134.2291
270.0018-0.00190.00080.00240.0010.00240.0035-0.00410.0045-0.01540.0109-0.00770.00670.0107-00.23460.00180.02210.3052-0.05070.249682.0351-0.8987147.744
280.005-0.0010.00250.00540.00170.0023-0.02280.02750.0074-0.0149-0.0089-0.0009-0.01780.0036-0.00520.1713-0.02480.02280.15590.01430.07360.66484.9242148.0054
290.00690.0089-0.00070.0118-0.00060.00270.00490.0325-0.0059-0.04620.00750.0001-0.01360.01590.01220.1378-0.01080.02140.1112-0.01260.061156.6259-5.6351144.2402
300.0617-0.04080.00170.07430.02430.0386-0.02750.07610.0526-0.0308-0.02180.0069-0.04020.0225-0.0840.139300.01930.04260.0602-0.009749.57917.8497143.5225
310.00170.00180.00150.00090.0010.0006-0.01250.0133-0.0166-0.0214-0.015-0.0032-0.02-0.002400.1291-0.0150.00530.1280.02210.116352.436511.096166.5585
320.00280.0023-0.00160.00070.00120.0010.03-0.02650.05940.00250.02010.0209-0.0253-0.0437-00.15660.00330.00570.069600.090446.729926.395180.8877
330.0022-0.0002-0.00250.00830.00220.0028-0.0140.0452-0.0268-0.01420.00940.00530.01520.0137-00.22890.01490.02050.1428-0.05830.143152.3437-39.7432143.7718
340.036-0.0098-0.00790.0121-0.00460.0202-0.02220.0068-0.1111-0.09420.015-0.00890.09650.0201-0.00160.14320.0057-0.00250.0889-0.03010.091445.9152-34.8636149.8523
350.0033-0.0022-0.00020.0016-0.0010.001-0.01170.0148-0.06280.02340.0028-0.00230.00470.0099-00.1317-0.0291-0.01130.14640.03350.201135.3247-39.4014165.6996
360.0029-0.0007-0.00090.00080.0007-0.0001-0.01570.01870.00940.0198-0.00780.00240.0069-0.010800.13320.0049-0.01270.0965-0.0170.107549.9745-25.8203154.5743
370.0092-0.0036-0.00310.00540.00060.00120.01960.013-0.0366-0.04210.0123-0.0153-0.00180.00430.00710.1388-0.0161-0.01510.0797-0.0270.084139.6037-23.2639146.0515
380.0038-0.0024-0.00270.0038-0.00170.0030.0387-0.02360.00470.0175-0.0031-0.0359-0.0221-0.004700.0660.0059-0.01370.0453-0.00730.085236.4249-15.1159155.9994
390.01820.0041-0.00360.01350.00250.00160.00080.04840.0084-0.0610.00290.00690.00160.00040.01660.14670.00650.0010.0664-0.01580.031546.3873-20.2562139.6839
400.0013-0.0008-0.0014-0.00020.00070.0029-0.0026-0.0215-0.00710.0056-0.04540.00880.02570.0203-00.1126-0.00210.01330.0892-0.0080.071462.4969-15.9707158.9046
410.01790.00910.01650.01090.00220.01970.05080.02280.0093-0.03270.045-0.0346-0.00950.02970.00070.09560.00470.04040.1922-0.02150.106984.442-14.4949167.0662
420.0061-0.00170.00050.0004-0.00010.00140.01370.026-0.0069-0.00990.00720.03730.0119-0.036600.1190.02-0.03890.1356-0.00150.155411.09742.6308158.6387
430.0195-0.0017-0.00760.00810.00280.02290.0074-0.01580.0002-0.027-0.02580.0832-0.0548-0.0538-0.01510.12220.0369-0.0310.09220.0090.11319.83267.1666159.2002
44-00.0003-0.00010.00190.00250.00310.0278-0.01320.02460.02430.01710.0105-0.01-0.009600.2230.0148-0.02390.10550.00210.120727.032123.127168.1912
450.00350.0033-0.00150.0031-0.00180.0008-0.0010.02360.0342-0.01440.03210.00080.00920.0043-00.09150.0008-0.01580.0863-0.00160.092928.1880.8349162.4744
460.00140.0074-0.00130.0403-0.01010.0079-0.02140.00840.004-0.06140.00980.03720.0004-0.0002-0.02440.10880.0201-0.05240.04710.0485-0.027835.35725.0065149.6642
470.0343-0.0103-0.01880.0087-0.00240.0228-0.02870.0008-0.0105-0.0124-0.03880.0370.00420.0135-0.03750.08180.0042-0.04210.0668-0.00210.081625.0215-11.0394156.5903
480.00140.00070.00080.00020.00070.00260.01070.00570.023-0.0134-0.0076-0.01580.0054-0.018400.08510.0138-0.020.1076-0.01370.105135.3656-12.9672173.0243
490.0028-0.00260.00290.0018-0.00090.00370.02570.0459-0.05880.01870.027-0.01330.0310.01800.1184-0.016-0.0130.12640.01840.132232.7762-29.093186.9024
500.0348-0.00890.01910.0123-0.01990.0279-0.0145-0.03620.0004-0.00640.0074-0.01940.03790.05380.00090.0440.0643-0.04250.0719-0.01130.182449.3854-24.4889107.1087
510.0512-0.02590.00650.0372-0.00490.04320.01140.01540.0222-0.0062-0.0029-0.0810.03330.0667-0.00370.00390.0364-0.03880.1323-0.02590.205646.8679-18.4959103.7269
520.00710.0063-0.00030.00520.00110.0008-0.00020.0126-0.0004-0.00330.0004-0.0205-0.01030.01940.00110.0516-0.04430.03120.1473-0.03630.207853.6091-6.614290.655
530.0051-0.00860.00270.01390.00140.0110.0077-0.00390.00160.00660.0157-0.03680.01160.03870.0220.04070.013-0.01940.0924-0.00390.113939.2687-10.9538107.1602
540.00270.0028-0.00020.00480.00330.0139-0.0212-0.00850.00270.00910.0145-0.0160.00860.002-0.00050.0280.0022-0.0150.0615-0.01850.100131.0467-0.6915110.145
550.01930.0027-0.03290.00650.00580.0562-0.0379-0.00350.00840.06550.0092-0.01640.03210.0169-0.00760.07160.0172-0.01820.08310.00050.113733.2753-18.3964115.1349
560.003-0.00170.00530.0015-0.00260.00580.02140.00040.04560.00880.0151-0.01420.04030.01400.05980.0062-0.00150.10130.00380.087120.5252-22.009295.5838
570.0067-0.00250.00320.00010.00010.0034-0.0625-0.033-0.03250.01620.02610.01340.0254-0.033-00.1116-0.0116-0.03950.07650.01730.15058.1807-38.20788.0692
580.00560.00030.00020.00750.0050.0022-0.0077-0.00690.00490.01240.0248-0.0324-0.01010.0267-00.148-0.0432-0.01970.103-0.00870.165630.349129.0822114.7049
590.0093-0.0040.00590.0219-0.00130.007-0.0416-0.03250.08750.03490.0193-0.0126-0.09530.0277-00.1039-0.0096-0.01380.0766-0.01110.096422.281523.5756114.2754
600.00350.0007-0.00350.00240.00030.0028-0.02450.03240.0274-0.0254-0.03030.01830.0119-0.0039-00.16080.0174-0.02270.15370.02580.13883.616826.8636109.6325
610.0031-0.0032-0.00130.002-0.00050-0.0326-0.02030.00670.01080.03540.0151-0.0106-0.006-00.0671-0.0023-0.00690.0467-0.00740.080222.503413.4114111.6541
620.0060.0037-0.00570.0077-0.00370.0032-0.01090.01170.02210.02110.01020.0083-0.01370.0385-00.1108-0.0057-0.01590.1199-0.01530.108614.74019.4774118.9323
630.02390.0077-0.01670.0242-0.0010.0137-0.01840.0021-0.00350.0512-0.0175-0.0314-0.0101-0.0063-0.02930.0294-0.0191-0.01470.02520.00220.030619.67462.0796121.1795
640.00250.00170.00340.03120.00080.00780.00990.00460.0005-0.0060.0014-0.0602-0.01520.0361-0.01740.0441-0.0107-0.04320.0814-0.01940.12435.877510.8801109.9274
650.0028-0.00090.00350.0006-0.00110.0031-0.013-0.00630.00220.00690.0080.0109-0.01710.0139-00.0643-0.0079-0.01220.0924-0.01220.100428.56676.03992.4016
660.00220.00660.00520.01670.0120.00850.01990.0164-0.01010.0123-0.0026-0.050.01310.02880.00150.1-0.04150.04140.1851-0.01580.121241.69916.428575.1388
670.01060.006-0.0010.01180.00340.0089-0.0089-0.0115-0.00370.02340.030.018-0.0011-0.03040.0060.1054-0.0190.03740.13760.00840.0988-6.3267-17.1304128.6898
680.0249-0.01-0.01120.00950.00870.07620.0224-0.0145-0.04220.054-0.00890.06090.034-0.10310.00460.0712-0.0260.0110.0080.03280.0241.3322-22.8897118.3659
690.0205-0.0114-0.00790.00450.0040.0023-0.0252-0.0067-0.03690.05570.0425-0.03690.0405-0.0243-00.06-0.0029-0.00810.06070.01150.067617.1951-18.2677117.9639
700.02420.0209-0.00620.023-0.00390.00160.0270.00350.04360.0463-0.0121-0.01450.03270.02220.00090.0852-0.0064-0.00430.0720.00160.0610.4786-6.5215123.5016
710.00740.0096-0.00580.01380.00460.02290.0419-0.009-0.014-0.0138-0.05230.0181-0.0439-0.0151-00.09030.00610.00930.0906-0.00230.0938-5.96799.099998.0875
720.09570.01240.03120.0172-0.0250.0964-0.0391-0.01560.0859-0.0440.0018-0.041-0.1390.0367-0.05310.0828-0.05840.01060.01870.02080.060515.347724.763978.4641
730.00020.00020.00070.00190.00140.0020.0154-0.02360.00350.0060.0135-0.0184-0.01740.020700.1501-0.07950.01170.2171-0.03020.224236.774222.74783.698
740.01470.011-0.00670.0098-0.00910.0365-0.02420.0078-0.0177-0.03720-0.0224-0.0587-0.0171-0.0180.0443-0.020.01230.07670.01320.057616.012612.401779.3766
750.0016-0.0010.00290.00490.00030.0026-0.00760.01490.00680.023-0.01270.0016-0.0070.019-00.0637-0.00120.00420.0855-0.00420.077123.04590.674579.9467
760.01370.01340.00390.01280.00850.00640.0011-0.0118-0.0348-0.0016-0.01420.0054-0.03410.0095-0.00310.050.00550.00710.05440.01020.04765.92939.582578.9663
770.00090.00120.0010.00230.00330.003-0.04330.0285-0.0108-0.0135-0.0499-0.029-0.00130.015500.0896-0.014-0.00730.09830.01650.13547.67658.6606102.4694
7800.00070.00170.004-0.00310.00320.0498-0.0070.01650.01410.01330.0407-0.0085-0.008100.11610.01140.01440.13670.00670.1241-4.272612.0515119.9373
790.04360.01120.02310.01450.00510.08550.04970.0553-0.0964-0.0540.0031-0.07380.06890.07760.05690.02460.03650.01890.0982-0.04570.122932.8182-24.977471.8828
800.0017-0.00130.00230.0013-0.00190.00270.0035-0.0111-0.02820.0050.0027-0.01910.01350.007900.19180.0441-0.04510.16720.02210.231127.2294-39.719187.5577
810.01130.00080.00220.0066-0.00660.0077-0.0036-0.0515-0.0166-0.0187-0.00590.00380.03730.0205-00.05540.0098-0.00540.0773-0.00660.084821.6309-20.141178.5484
820.0016-0.006-0.00160.03740.01220.0060.00910.01480.01420.02940.0391-0.00650.0016-0.00560.02110.0221-0.00490.01080.04810.00480.03611.2235-14.991176.5349
830.0026-0.0044-0.00080.00650.00210.00020.00560.01370.0277-0.0037-0.0058-0.0345-0.01210.0025-00.0430.00310.01450.08790.00110.085830.4831-6.446773.574
840.0013-0.001-0.00020.00220.00250.0023-0.00880.01760.0049-0.0115-0.0042-0.00270.0410.021300.08590.01960.00450.11620.00110.128533.3974-3.704492.7198
850.0025-0.0049-0.00420.00730.0110.00880.024-0.0045-0.01130.0139-0.0229-0.0909-0.0391-0.00310.00030.0929-0.03970.00160.1712-0.02120.264348.99029.988299.1246
860.01860.00760.01380.0267-0.0120.0214-0.0223-0.0370.0116-0.01310.04870.05620.0228-0.10120.00160.044-0.0214-0.00120.10010.02480.1128-17.7784-18.960388.4222
870.0194-0.0178-0.02420.03140.04280.0927-0.0006-0.01430.02290.0276-0.01850.08520.0428-0.0503-0.0140.0316-0.0110.00170.08490.01070.0789-13.9573-13.614792.7924
880.003-0.0015-0.00080.0026-0.00180.0052-0.0449-0.03770.0016-0.019-0.03580.008-0.0134-0.0349-0.00040.14120.00880.04640.1871-0.0420.1136-18.33790.451104.7607
890.0032-0.0023-0.00350.0069-0.00530.00740.0379-0.0193-0.0082-0.0013-0.0358-0.00630.0087-0.00830.00840.047-0.0059-0.00330.10550.00910.0744-5.0082-7.55788.7509
900.00350.00220.0060.00430.0020.00390.0025-0.0101-0.0132-0.051-0.00990.0086-0.00410.0001-00.0575-0.01010.01610.0617-0.00270.05780.8043-2.149779.7486
910.00140.00050.00020.001-0.00110.0023-0.02310.0128-0.0255-0.0049-0.0122-0.00250.00380.0106-00.0649-0.0140.00140.0545-0.00690.0422-6.5506-22.81478.6128
920.0034-0.0019-0.00350.00160.00160.0018-0.0177-0.03640.02170.005-0.0145-0.0026-0.00520.014600.05950.00460.00510.07880.00790.08278.492-21.435492.3234
930.00110.002-0.00250.0033-0.00210.0054-0.02590.00120.0066-0.0067-0.0272-0.00010.0252-0.0189-0.00020.0428-0.00950.00460.0868-0.00770.039911.2572-23.8788102.1687
940.02050.00550.01010.00270.0010.0071-0.02570.0118-0.02280.00970.0048-0.0090.03790.0247-0.00010.08610.0118-0.02910.0592-0.00160.127220.9736-38.5636110.5656
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection details
1X-RAY DIFFRACTION1chain 'A' and (resid 14 through 109 )
2X-RAY DIFFRACTION2chain 'A' and (resid 110 through 134 )
3X-RAY DIFFRACTION3chain 'A' and (resid 135 through 199 )
4X-RAY DIFFRACTION4chain 'A' and (resid 200 through 235 )
5X-RAY DIFFRACTION5chain 'A' and (resid 236 through 267 )
6X-RAY DIFFRACTION6chain 'A' and (resid 268 through 314 )
7X-RAY DIFFRACTION7chain 'B' and (resid 14 through 62 )
8X-RAY DIFFRACTION8chain 'B' and (resid 63 through 89 )
9X-RAY DIFFRACTION9chain 'B' and (resid 90 through 109 )
10X-RAY DIFFRACTION10chain 'B' and (resid 110 through 134 )
11X-RAY DIFFRACTION11chain 'B' and (resid 135 through 199 )
12X-RAY DIFFRACTION12chain 'B' and (resid 200 through 235 )
13X-RAY DIFFRACTION13chain 'B' and (resid 236 through 251 )
14X-RAY DIFFRACTION14chain 'B' and (resid 252 through 270 )
15X-RAY DIFFRACTION15chain 'B' and (resid 271 through 288 )
16X-RAY DIFFRACTION16chain 'B' and (resid 289 through 314 )
17X-RAY DIFFRACTION17chain 'C' and (resid 14 through 109 )
18X-RAY DIFFRACTION18chain 'C' and (resid 110 through 134 )
19X-RAY DIFFRACTION19chain 'C' and (resid 135 through 184 )
20X-RAY DIFFRACTION20chain 'C' and (resid 185 through 215 )
21X-RAY DIFFRACTION21chain 'C' and (resid 216 through 267 )
22X-RAY DIFFRACTION22chain 'C' and (resid 268 through 287 )
23X-RAY DIFFRACTION23chain 'C' and (resid 288 through 314 )
24X-RAY DIFFRACTION24chain 'D' and (resid 18 through 62 )
25X-RAY DIFFRACTION25chain 'D' and (resid 63 through 89 )
26X-RAY DIFFRACTION26chain 'D' and (resid 90 through 109 )
27X-RAY DIFFRACTION27chain 'D' and (resid 110 through 134 )
28X-RAY DIFFRACTION28chain 'D' and (resid 135 through 168 )
29X-RAY DIFFRACTION29chain 'D' and (resid 169 through 215 )
30X-RAY DIFFRACTION30chain 'D' and (resid 216 through 267 )
31X-RAY DIFFRACTION31chain 'D' and (resid 268 through 287 )
32X-RAY DIFFRACTION32chain 'D' and (resid 288 through 314 )
33X-RAY DIFFRACTION33chain 'E' and (resid 17 through 42 )
34X-RAY DIFFRACTION34chain 'E' and (resid 43 through 109 )
35X-RAY DIFFRACTION35chain 'E' and (resid 110 through 134 )
36X-RAY DIFFRACTION36chain 'E' and (resid 135 through 156 )
37X-RAY DIFFRACTION37chain 'E' and (resid 157 through 184 )
38X-RAY DIFFRACTION38chain 'E' and (resid 185 through 215 )
39X-RAY DIFFRACTION39chain 'E' and (resid 216 through 254 )
40X-RAY DIFFRACTION40chain 'E' and (resid 255 through 287 )
41X-RAY DIFFRACTION41chain 'E' and (resid 288 through 314 )
42X-RAY DIFFRACTION42chain 'F' and (resid 17 through 42 )
43X-RAY DIFFRACTION43chain 'F' and (resid 43 through 109 )
44X-RAY DIFFRACTION44chain 'F' and (resid 110 through 134 )
45X-RAY DIFFRACTION45chain 'F' and (resid 135 through 156 )
46X-RAY DIFFRACTION46chain 'F' and (resid 157 through 235 )
47X-RAY DIFFRACTION47chain 'F' and (resid 236 through 267 )
48X-RAY DIFFRACTION48chain 'F' and (resid 268 through 288 )
49X-RAY DIFFRACTION49chain 'F' and (resid 289 through 314 )
50X-RAY DIFFRACTION50chain 'G' and (resid 18 through 62 )
51X-RAY DIFFRACTION51chain 'G' and (resid 63 through 109 )
52X-RAY DIFFRACTION52chain 'G' and (resid 110 through 134 )
53X-RAY DIFFRACTION53chain 'G' and (resid 135 through 197 )
54X-RAY DIFFRACTION54chain 'G' and (resid 198 through 215 )
55X-RAY DIFFRACTION55chain 'G' and (resid 216 through 267 )
56X-RAY DIFFRACTION56chain 'G' and (resid 268 through 287 )
57X-RAY DIFFRACTION57chain 'G' and (resid 288 through 314 )
58X-RAY DIFFRACTION58chain 'H' and (resid 17 through 42 )
59X-RAY DIFFRACTION59chain 'H' and (resid 43 through 109 )
60X-RAY DIFFRACTION60chain 'H' and (resid 110 through 134 )
61X-RAY DIFFRACTION61chain 'H' and (resid 135 through 175 )
62X-RAY DIFFRACTION62chain 'H' and (resid 176 through 199 )
63X-RAY DIFFRACTION63chain 'H' and (resid 200 through 235 )
64X-RAY DIFFRACTION64chain 'H' and (resid 236 through 267 )
65X-RAY DIFFRACTION65chain 'H' and (resid 268 through 287 )
66X-RAY DIFFRACTION66chain 'H' and (resid 288 through 314 )
67X-RAY DIFFRACTION67chain 'I' and (resid 17 through 42 )
68X-RAY DIFFRACTION68chain 'I' and (resid 43 through 154 )
69X-RAY DIFFRACTION69chain 'I' and (resid 155 through 215 )
70X-RAY DIFFRACTION70chain 'I' and (resid 216 through 267 )
71X-RAY DIFFRACTION71chain 'I' and (resid 268 through 314 )
72X-RAY DIFFRACTION72chain 'J' and (resid 14 through 109 )
73X-RAY DIFFRACTION73chain 'J' and (resid 110 through 134 )
74X-RAY DIFFRACTION74chain 'J' and (resid 135 through 184 )
75X-RAY DIFFRACTION75chain 'J' and (resid 185 through 215 )
76X-RAY DIFFRACTION76chain 'J' and (resid 216 through 267 )
77X-RAY DIFFRACTION77chain 'J' and (resid 268 through 288 )
78X-RAY DIFFRACTION78chain 'J' and (resid 289 through 314 )
79X-RAY DIFFRACTION79chain 'K' and (resid 14 through 109 )
80X-RAY DIFFRACTION80chain 'K' and (resid 110 through 134 )
81X-RAY DIFFRACTION81chain 'K' and (resid 135 through 197 )
82X-RAY DIFFRACTION82chain 'K' and (resid 198 through 235 )
83X-RAY DIFFRACTION83chain 'K' and (resid 236 through 267 )
84X-RAY DIFFRACTION84chain 'K' and (resid 268 through 287 )
85X-RAY DIFFRACTION85chain 'K' and (resid 288 through 314 )
86X-RAY DIFFRACTION86chain 'L' and (resid 14 through 62 )
87X-RAY DIFFRACTION87chain 'L' and (resid 63 through 109 )
88X-RAY DIFFRACTION88chain 'L' and (resid 110 through 134 )
89X-RAY DIFFRACTION89chain 'L' and (resid 135 through 199 )
90X-RAY DIFFRACTION90chain 'L' and (resid 200 through 235 )
91X-RAY DIFFRACTION91chain 'L' and (resid 236 through 252 )
92X-RAY DIFFRACTION92chain 'L' and (resid 253 through 270 )
93X-RAY DIFFRACTION93chain 'L' and (resid 271 through 288 )
94X-RAY DIFFRACTION94chain 'L' and (resid 289 through 314 )

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