- PDB-4esq: Crystal structure of the extracellular domain of PknH from Mycoba... -
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基本情報
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データベース: PDB / ID: 4esq
タイトル
Crystal structure of the extracellular domain of PknH from Mycobacterium tuberculosis
要素
Serine/threonine protein kinase
キーワード
TRANSFERASE / Receptor Kinase / Membrane
機能・相同性
機能・相同性情報
regulation of lipid biosynthetic process / negative regulation of growth / negative regulation of catalytic activity / response to host immune response / cell wall / positive regulation of catalytic activity / plasma membrane => GO:0005886 / positive regulation of DNA binding / protein autophosphorylation / membrane => GO:0016020 ...regulation of lipid biosynthetic process / negative regulation of growth / negative regulation of catalytic activity / response to host immune response / cell wall / positive regulation of catalytic activity / plasma membrane => GO:0005886 / positive regulation of DNA binding / protein autophosphorylation / membrane => GO:0016020 / non-specific serine/threonine protein kinase / protein kinase activity / protein serine/threonine kinase activity / positive regulation of DNA-templated transcription / ATP binding / plasma membrane 類似検索 - 分子機能
PknH-like extracellular domain / PknH-like extracellular domain / PknH-like extracellular domain superfamily / PknH-like extracellular domain / Protein Transport Mog1p; Chain A / Serine/threonine-protein kinase, active site / Serine/Threonine protein kinases active-site signature. / Protein kinase domain / Serine/Threonine protein kinases, catalytic domain / Protein kinase, ATP binding site ...PknH-like extracellular domain / PknH-like extracellular domain / PknH-like extracellular domain superfamily / PknH-like extracellular domain / Protein Transport Mog1p; Chain A / Serine/threonine-protein kinase, active site / Serine/Threonine protein kinases active-site signature. / Protein kinase domain / Serine/Threonine protein kinases, catalytic domain / Protein kinase, ATP binding site / Protein kinases ATP-binding region signature. / Protein kinase domain profile. / Protein kinase domain / Protein kinase-like domain superfamily / 3-Layer(aba) Sandwich / Alpha Beta 類似検索 - ドメイン・相同性
TERBIUM(III) ION / Non-specific serine/threonine protein kinase / Serine/threonine-protein kinase PknH 類似検索 - 構成要素
モノクロメーター: Double flat crystal, Si(111) / プロトコル: SINGLE WAVELENGTH / 単色(M)・ラウエ(L): M / 散乱光タイプ: x-ray
放射波長
波長: 1.1159 Å / 相対比: 1
Reflection
冗長度: 3.8 % / Av σ(I) over netI: 17.44 / 数: 69365 / Rmerge(I) obs: 0.061 / Χ2: 1.01 / D res high: 1.7 Å / D res low: 50 Å / Num. obs: 18089 / % possible obs: 98.8
Diffraction reflection shell
最高解像度 (Å)
最低解像度 (Å)
% possible obs (%)
ID
Rmerge(I) obs
Chi squared
Redundancy
3.66
50
99.7
1
0.04
0.98
3.8
2.91
3.66
99.9
1
0.055
0.96
3.8
2.54
2.91
99.7
1
0.061
1.081
3.9
2.31
2.54
99.6
1
0.068
1.026
3.9
2.14
2.31
99.1
1
0.073
1.077
3.9
2.02
2.14
98.9
1
0.086
1.064
3.9
1.91
2.02
98.2
1
0.108
1.01
3.9
1.83
1.91
97.7
1
0.148
1.005
3.8
1.76
1.83
97.5
1
0.198
1.017
3.8
1.7
1.76
98.1
1
0.253
0.927
3.8
反射
解像度: 1.7→50 Å / Num. obs: 34200 / % possible obs: 98.8 % / 冗長度: 3.8 % / Rmerge(I) obs: 0.061 / Χ2: 1.015 / Net I/σ(I): 17.1