- PDB-4d71: Crystal structure of a family 98 glycoside hydrolase catalytic mo... -
+
データを開く
IDまたはキーワード:
読み込み中...
-
基本情報
登録情報
データベース: PDB / ID: 4d71
タイトル
Crystal structure of a family 98 glycoside hydrolase catalytic module (Sp3GH98) in complex with the type 2 blood group A-tetrasaccharide (E558A X02 mutant)
SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS BELOW ... SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL.
BETA-D-GALACTOSE (GAL): PART OF THE A-TETRASACCHARIDE SUBSTRATE ALPHA-L-FUCOSE (FUC): PART OF THE A- ...BETA-D-GALACTOSE (GAL): PART OF THE A-TETRASACCHARIDE SUBSTRATE ALPHA-L-FUCOSE (FUC): PART OF THE A-TETRASACCHARIDE SUBSTRATE N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE (A2G): PART OF THE A-TETRASACCHARIDE SUBSTRATE N-ACETYL-D-GLUCOSAMINE (NAG): PART OF THE A-TETRASACCHARIDE SUBSTRATE
解像度: 1.77→30.31 Å / Cor.coef. Fo:Fc: 0.959 / Cor.coef. Fo:Fc free: 0.94 / SU B: 1.991 / SU ML: 0.064 / 交差検証法: THROUGHOUT / ESU R: 0.109 / ESU R Free: 0.108 / 立体化学のターゲット値: MAXIMUM LIKELIHOOD / 詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
Rfactor
反射数
%反射
Selection details
Rfree
0.20107
3399
5 %
RANDOM
Rwork
0.16261
-
-
-
obs
0.16453
63921
98.88 %
-
溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.4 Å / 溶媒モデル: MASK