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- PDB-4cr6: Crystal structure of the N-acetyl-D-mannosamine dehydrogenase wit... -

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Basic information

Entry
Database: PDB / ID: 4cr6
TitleCrystal structure of the N-acetyl-D-mannosamine dehydrogenase without substrates
ComponentsN-ACYLMANNOSAMINE 1-DEHYDROGENASE
KeywordsOXIDOREDUCTASE / N-ACETYL-D-MANNOSAMINE DEHYDROGENASE / SHORT-CHAIN DEHYDROGENASE/REDUCTASE / SUBSTRATE SELECTIVITY
Function / homology
Function and homology information


N-acylmannosamine 1-dehydrogenase / N-acylmannosamine 1-dehydrogenase activity
Similarity search - Function
short chain dehydrogenase / Short-chain dehydrogenase/reductase, conserved site / Short-chain dehydrogenases/reductases family signature. / Enoyl-(Acyl carrier protein) reductase / Short-chain dehydrogenase/reductase SDR / NAD(P)-binding Rossmann-like Domain / NAD(P)-binding domain superfamily / Rossmann fold / 3-Layer(aba) Sandwich / Alpha Beta
Similarity search - Domain/homology
alpha-D-mannopyranose / N-acylmannosamine 1-dehydrogenase
Similarity search - Component
Biological speciesFLAVOBACTERIUM SP. 141-8 (bacteria)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.9 Å
AuthorsGil-Ortiz, F. / Sola-Carvajal, A. / Garcia-Carmona, F. / Sanchez-Ferrer, A. / Rubio, V.
CitationJournal: Biochem.J. / Year: 2014
Title: Crystal Structures and Functional Studies Clarify Substrate Selectivity and Catalytic Residues for the Unique Orphan Enzyme N-Acetyl-D-Mannosamine Dehydrogenase.
Authors: Sola-Carvajal, A. / Gil-Ortiz, F. / Garcia-Carmona, F. / Rubio, V. / Sanchez-Ferrer, A.
History
DepositionFeb 25, 2014Deposition site: PDBE / Processing site: PDBE
Revision 1.0Jul 9, 2014Provider: repository / Type: Initial release
Revision 1.1Sep 3, 2014Group: Database references / Other
Revision 1.2Jul 29, 2020Group: Advisory / Data collection ...Advisory / Data collection / Derived calculations / Other / Structure summary
Category: chem_comp / database_PDB_caveat ...chem_comp / database_PDB_caveat / entity / pdbx_chem_comp_identifier / pdbx_database_status / pdbx_entity_nonpoly / struct_site / struct_site_gen
Item: _chem_comp.name / _chem_comp.type ..._chem_comp.name / _chem_comp.type / _entity.pdbx_description / _pdbx_database_status.status_code_sf / _pdbx_entity_nonpoly.name
Description: Carbohydrate remediation / Provider: repository / Type: Remediation
Revision 1.3Dec 20, 2023Group: Data collection / Database references ...Data collection / Database references / Refinement description / Structure summary
Category: chem_comp / chem_comp_atom ...chem_comp / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ncs_dom_lim
Item: _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI ..._chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: N-ACYLMANNOSAMINE 1-DEHYDROGENASE
B: N-ACYLMANNOSAMINE 1-DEHYDROGENASE
C: N-ACYLMANNOSAMINE 1-DEHYDROGENASE
D: N-ACYLMANNOSAMINE 1-DEHYDROGENASE
hetero molecules


Theoretical massNumber of molelcules
Total (without water)110,3426
Polymers109,9814
Non-polymers3602
Water3,837213
1


  • Idetical with deposited unit
  • defined by author&software
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area19930 Å2
ΔGint-108.7 kcal/mol
Surface area31490 Å2
MethodPISA
Unit cell
Length a, b, c (Å)59.255, 59.062, 74.206
Angle α, β, γ (deg.)81.13, 73.29, 79.25
Int Tables number1
Space group name H-MP1
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails
11A
21B
31C
41D

NCS domain segments:

Ens-ID: 1

Dom-IDComponent-IDBeg auth comp-IDBeg label comp-IDEnd auth comp-IDEnd label comp-IDRefine codeAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11GLYGLYMETMET3AA11 - 4511 - 45
21GLYGLYMETMET3BB11 - 4511 - 45
31GLYGLYMETMET3CC11 - 4511 - 45
41GLYGLYMETMET3DD11 - 4511 - 45
12ASPASPGLYGLY4AA46 - 8646 - 86
22ASPASPGLYGLY4BB46 - 8646 - 86
32ASPASPGLYGLY4CC46 - 8646 - 86
42ASPASPGLYGLY4DD46 - 8646 - 86
13GLYGLYASNASN3AA87 - 11987 - 119
23GLYGLYASNASN3BB87 - 11987 - 119
33GLYGLYASNASN3CC87 - 11987 - 119
43GLYGLYASNASN3DD87 - 11987 - 119
14THRTHRARGARG3AA121 - 128121 - 128
24THRTHRARGARG3BB121 - 128121 - 128
34THRTHRARGARG3CC121 - 128121 - 128
44THRTHRARGARG3DD121 - 128121 - 128
15ALAALAALAALA3AA129 - 146129 - 146
25ALAALAALAALA3BB129 - 146129 - 146
35ALAALAALAALA3CC129 - 146129 - 146
45ALAALAALAALA3DD129 - 146129 - 146
16ARGARGPROPRO3AA147 - 198147 - 198
26ARGARGPROPRO3BB147 - 198147 - 198
36ARGARGPROPRO3CC147 - 198147 - 198
46ARGARGPROPRO3DD147 - 198147 - 198
17VALVALGLUGLU3AA199 - 215199 - 215
27VALVALGLUGLU3BB199 - 215199 - 215
37VALVALGLUGLU3CC199 - 215199 - 215
47VALVALGLUGLU3DD199 - 215199 - 215
18GLNGLNGLYGLY3AA216 - 227216 - 227
28GLNGLNGLYGLY3BB216 - 227216 - 227
38GLNGLNGLYGLY3CC216 - 227216 - 227
48GLNGLNGLYGLY3DD216 - 227216 - 227
19LEULEUALAALA3AA228 - 233228 - 233
29LEULEUALAALA3BB228 - 233228 - 233
39LEULEUALAALA3CC228 - 233228 - 233
49LEULEUALAALA3DD228 - 233228 - 233
110THRTHRARGARG3AA234 - 267234 - 267
210THRTHRARGARG3BB234 - 267234 - 267
310THRTHRARGARG3CC234 - 267234 - 267
410THRTHRARGARG3DD234 - 267234 - 267
111GLUGLUARGARG3AA268 - 271268 - 271
211GLUGLUARGARG3BB268 - 271268 - 271
311GLUGLUARGARG3CC268 - 271268 - 271
411GLUGLUARGARG3DD268 - 271268 - 271

NCS oper:
IDCodeMatrixVector
1given(-1, 0.007452, 0.000862), (-0.000749, -1, 0.004132), (0.000859, 0.004133, 1)40.29, 14.29, -0.07727
2given(-0.1872, -0.9823, 0.001515), (-0.9823, 0.1872, -0.002177), (0.001855, -0.001896, -1)31.04, 25.89, 136.7
3given(0.1871, 0.9823, -0.001409), (0.9823, -0.1871, -0.003052), (-0.003262, -0.000813, -1)9.339, -10.87, 136.8

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Components

#1: Protein
N-ACYLMANNOSAMINE 1-DEHYDROGENASE / / NAMDH / N-ACETYL-D-MANNOSAMINE DEHYDROGENASE


Mass: 27495.346 Da / Num. of mol.: 4
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) FLAVOBACTERIUM SP. 141-8 (bacteria) / Production host: ESCHERICHIA COLI BL21(DE3) (bacteria) / Variant (production host): ROSETTA
References: UniProt: P22441, N-acylmannosamine 1-dehydrogenase
#2: Sugar ChemComp-MAN / alpha-D-mannopyranose / alpha-D-mannose / D-mannose / mannose / Mannose


Type: D-saccharide, alpha linking / Mass: 180.156 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
Formula: C6H12O6
IdentifierTypeProgram
DManpaCONDENSED IUPAC CARBOHYDRATE SYMBOLGMML 1.0
a-D-mannopyranoseCOMMON NAMEGMML 1.0
a-D-ManpIUPAC CARBOHYDRATE SYMBOLPDB-CARE 1.0
ManSNFG CARBOHYDRATE SYMBOLGMML 1.0
#3: Water ChemComp-HOH / water / Water


Mass: 18.015 Da / Num. of mol.: 213 / Source method: isolated from a natural source / Formula: H2O

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.21 Å3/Da / Density % sol: 44 % / Description: NONE
Crystal growpH: 8
Details: 0.1 M HEPES, PH 7.5 AND 30% (W/V) PEG [POLY(ETHYLENE GLYCOL)] 300

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Data collection

DiffractionMean temperature: 294 K
Diffraction sourceSource: SYNCHROTRON / Site: ESRF / Beamline: ID23-2 / Wavelength: 0.9393
DetectorType: MARMOSAIC 225 mm CCD / Detector: CCD / Date: May 5, 2011
RadiationMonochromator: CHANEL-CUT / Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.9393 Å / Relative weight: 1
ReflectionResolution: 1.9→12 Å / Num. obs: 63579 / % possible obs: 90.5 % / Observed criterion σ(I): 2 / Redundancy: 1.9 % / Rmerge(I) obs: 0.06 / Net I/σ(I): 6.2
Reflection shellResolution: 1.9→2 Å / Redundancy: 2 % / Rmerge(I) obs: 0.17 / Mean I/σ(I) obs: 3.9 / % possible all: 92.7

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Processing

Software
NameVersionClassification
REFMAC5.5.0109refinement
MOSFLMdata reduction
SCALAdata scaling
MOLREPphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: PDB ENTRY 2D1Y
Resolution: 1.9→12 Å / Cor.coef. Fo:Fc: 0.939 / Cor.coef. Fo:Fc free: 0.928 / SU B: 7.748 / SU ML: 0.103 / Cross valid method: THROUGHOUT / ESU R: 0.195 / ESU R Free: 0.156 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
RfactorNum. reflection% reflectionSelection details
Rfree0.22844 3360 5 %RANDOM
Rwork0.20865 ---
obs0.20966 63579 90.58 %-
Solvent computationIon probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.4 Å / Solvent model: MASK
Displacement parametersBiso mean: 27.924 Å2
Baniso -1Baniso -2Baniso -3
1--0.97 Å2-0.43 Å2-0.98 Å2
2---0.65 Å2-0.07 Å2
3---2.36 Å2
Refinement stepCycle: LAST / Resolution: 1.9→12 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms7170 0 24 213 7407
Refine LS restraints
Refine-IDTypeDev idealDev ideal targetNumber
X-RAY DIFFRACTIONr_bond_refined_d0.0150.0227285
X-RAY DIFFRACTIONr_bond_other_d0.0040.024764
X-RAY DIFFRACTIONr_angle_refined_deg1.3471.9799875
X-RAY DIFFRACTIONr_angle_other_deg1.0533.00211567
X-RAY DIFFRACTIONr_dihedral_angle_1_deg6.01851014
X-RAY DIFFRACTIONr_dihedral_angle_2_deg30.95822.381252
X-RAY DIFFRACTIONr_dihedral_angle_3_deg13.358151090
X-RAY DIFFRACTIONr_dihedral_angle_4_deg11.7691570
X-RAY DIFFRACTIONr_chiral_restr0.1150.21177
X-RAY DIFFRACTIONr_gen_planes_refined0.0050.0218393
X-RAY DIFFRACTIONr_gen_planes_other0.0020.021485
X-RAY DIFFRACTIONr_nbd_refined
X-RAY DIFFRACTIONr_nbd_other
X-RAY DIFFRACTIONr_nbtor_refined
X-RAY DIFFRACTIONr_nbtor_other
X-RAY DIFFRACTIONr_xyhbond_nbd_refined
X-RAY DIFFRACTIONr_xyhbond_nbd_other
X-RAY DIFFRACTIONr_metal_ion_refined
X-RAY DIFFRACTIONr_metal_ion_other
X-RAY DIFFRACTIONr_symmetry_vdw_refined
X-RAY DIFFRACTIONr_symmetry_vdw_other
X-RAY DIFFRACTIONr_symmetry_hbond_refined
X-RAY DIFFRACTIONr_symmetry_hbond_other
X-RAY DIFFRACTIONr_symmetry_metal_ion_refined
X-RAY DIFFRACTIONr_symmetry_metal_ion_other
X-RAY DIFFRACTIONr_mcbond_it0.6641.55003
X-RAY DIFFRACTIONr_mcbond_other0.1841.52146
X-RAY DIFFRACTIONr_mcangle_it1.14727833
X-RAY DIFFRACTIONr_mcangle_other
X-RAY DIFFRACTIONr_scbond_it1.98232282
X-RAY DIFFRACTIONr_scbond_other
X-RAY DIFFRACTIONr_scangle_it3.2264.52040
X-RAY DIFFRACTIONr_scangle_other
X-RAY DIFFRACTIONr_long_range_B_refined
X-RAY DIFFRACTIONr_long_range_B_other
X-RAY DIFFRACTIONr_rigid_bond_restr
X-RAY DIFFRACTIONr_sphericity_free
X-RAY DIFFRACTIONr_sphericity_bonded
Refine LS restraints NCS

Ens-ID: 1 / Refine-ID: X-RAY DIFFRACTION

Dom-IDAuth asym-IDNumberTypeRms dev position (Å)Weight position
1A1237tight positional0.020.05
2B1237tight positional0.020.05
3C1237tight positional0.020.05
4D1237tight positional0.020.05
1A408medium positional0.020.5
2B408medium positional0.020.5
3C408medium positional0.020.5
4D408medium positional0.010.5
1A1237loose positional0.055
2B1237loose positional0.055
3C1237loose positional0.035
4D1237loose positional0.035
1A1237tight thermal0.120.5
2B1237tight thermal0.110.5
3C1237tight thermal0.10.5
4D1237tight thermal0.10.5
1A408medium thermal0.042
2B408medium thermal0.042
3C408medium thermal0.052
4D408medium thermal0.052
1A1237loose thermal0.1110
2B1237loose thermal0.0910
3C1237loose thermal0.0910
4D1237loose thermal0.0910
LS refinement shellResolution: 1.9→1.948 Å / Total num. of bins used: 20
RfactorNum. reflection% reflection
Rfree0.27 269 -
Rwork0.252 4660 -
obs--92.6 %
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
11.7912-1.22422.00860.9458-1.46452.4874-0.07460.11090.2458-0.0095-0.0097-0.0592-0.18860.07010.08430.2044-0.0060.0130.15920.03740.220328.79483.906937.7059
24.0838-0.9851-0.60091.5611-0.70513.6895-0.06490.0667-0.2594-0.19260.08680.12420.2884-0.1827-0.02190.1460.0025-0.00520.1341-0.02210.133226.2709-8.139444.6378
32.3856-1.00250.78825.496-2.90773.9254-0.0108-0.1277-0.12960.01350.05640.09120.0714-0.094-0.04560.1907-0.00890.00820.2002-0.03450.17829.3744-8.584341.0169
40.82670.2967-0.74352.7275-1.51351.3348-0.0037-0.0266-0.0013-0.02870.05030.1461-0.0144-0.1475-0.04660.29210.00410.00490.2907-0.01750.281228.9162-16.110841.1682
50.8463-1.19620.33612.4559-0.76180.38390.06450.0177-0.1467-0.1795-0.1375-0.1980.23030.14120.0730.25740.05310.02020.21290.02310.247140.2957-9.544346.7201
60.72820.8466-1.30011.2302-1.75092.6389-0.41090.2964-0.1928-0.60330.2639-0.08980.859-0.53560.1470.3053-0.1220.02970.2227-0.05560.168424.8272-12.905461.9589
72.65980.4499-1.44673.4805-1.3456.4661-0.0760.2356-0.0821-0.25780.0143-0.1430.21670.04670.06160.11030.0037-0.01690.1146-0.01050.134429.0443-17.369868.8096
82.97780.519-0.95893.9716-2.19435.5505-0.01690.06090.0313-0.1063-0.075-0.2397-0.06750.2390.09180.10970.0136-0.01660.1071-0.03350.1240.3485-4.318554.9092
92.8785-0.8655-0.68111.16380.46252.1945-0.10450.34880.1852-0.31060.0107-0.2255-0.1010.12160.09380.1812-0.01870.00140.106-0.02840.121930.46081.475452.4168
103.33112.3572-1.96053.4402-1.90582.1951-0.07950.1324-0.0189-0.08720.07950.04950.0644-0.12300.0830.0131-0.0180.0843-0.0130.056227.0584-3.201364.4982
112.72370.4342-1.12862.374-0.7662.44840.00010.0565-0.0654-0.00820.0252-0.1308-0.06270.0664-0.02520.12360.0573-0.00470.0703-0.00430.049728.53211.73954.5041
124.02920.8509-3.29450.3176-0.76942.7879-0.16360.4158-0.2225-0.23290.0321-0.06690.2409-0.24140.13150.30180.038400.21830.00260.22068.7998-16.423253.4424
131.84790.6871-0.06931.1840.39570.565-0.10660.1782-0.1651-0.11170.0544-0.050.1166-0.08120.05210.1190.005-0.0060.0956-0.00170.094614.0629-0.303755.8266
144.11061.7311-0.5755.03881.34734.7212-0.0368-0.0829-0.20890.2912-0.03560.78560.0665-0.59170.07240.14460.00770.02680.1490.03060.2239-4.385-0.713362.8995
153.7875-0.6648-0.09951.08710.12283.6433-0.05140.2023-0.0657-0.24920.0752-0.069-0.03960.1168-0.02380.13970.00590.0040.14220.0280.133513.647719.048942.2249
161.9563-1.2558-0.78924.74511.95563.073-0.0231-0.21910.25150.02250.1489-0.227-0.22820.1771-0.12590.1942-0.0064-0.0070.22510.030.19411.112925.615942.5704
171.74740.27680.91813.18080.91181.09870.0028-0.00360.0437-0.12320.0465-0.211-0.06230.2263-0.04930.31350.0022-0.01030.30340.01630.294412.153629.221239.4581
181.4673-1.395-0.39351.80320.54640.33570.06930.04850.134-0.1042-0.14360.2281-0.2059-0.18330.07430.26840.0558-0.02410.2344-0.02980.28511.140923.201847.2586
190.15460.05890.12920.14270.15610.2279-0.15950.19950.0955-0.24780.04670.1206-0.34470.14880.11280.5337-0.18-0.15150.27240.07820.202717.525130.133863.6711
203.07680.71941.53973.69331.49345.574-0.00260.19850.0918-0.1732-0.03940.1258-0.1634-0.06330.0420.1193-0.00430.01650.11510.01150.133111.941731.527969.4265
214.80591.06371.73734.21522.06496.2009-0.01920.1848-0.1442-0.1638-0.04030.23370.1575-0.22340.05960.09870.01350.01790.09340.03690.1084-0.20817.558553.8247
225.52992.1113.85422.01441.55166.07670.03370.2815-0.2427-0.10320.11950.02370.17490.0544-0.15310.08160.03210.03330.06790.01820.105114.005313.852456.4276
233.54153.19332.44974.57942.48652.7369-0.11740.13010.0245-0.12430.1015-0.0364-0.09620.1010.01580.06210.02120.01740.06980.00790.053112.083117.612963.9716
242.81050.50391.13252.42730.76652.43550.00280.05140.0626-0.00590.02240.12850.061-0.068-0.02510.12280.05750.00460.06990.0040.049111.974212.565154.5123
250.25570.02010.12640.17430.0330.0678-0.02710.33120.0505-0.24210.01860.0181-0.04790.16620.00850.337-0.0268-0.01280.4360.02940.208431.718930.415552.81
261.5154-0.5396-1.75574.66750.69112.61280.065-0.20790.32720.2075-0.0079-0.2284-0.30860.3246-0.05710.1854-0.034-0.08480.11070.00740.274537.011525.655262.8708
271.95510.75620.14641.1493-0.32370.4832-0.11640.23150.1327-0.1620.08430.0723-0.0850.05430.03210.11890.00890.00640.0966-0.00370.092924.172112.6954.258
283.17281.24410.05670.9169-0.1445.8440.01190.01060.05070.0025-0.0352-0.4107-0.07150.65620.02330.1245-0.00450.00440.13220.01540.436344.740215.105863.7462
291.1819-0.0959-0.17354.444-0.10243.62240.0658-0.23910.0640.1569-0.0403-0.0123-0.11460.0867-0.02550.14240.0069-0.0260.1371-0.00160.125331.3597-1.660493.3242
304.7824-1.5075-2.57462.61661.1873.54120.063-0.04130.0987-0.17930.015-0.2308-0.06880.1954-0.07810.1975-0.01-0.03230.18340.01330.166235.637-4.901394.832
312.17820.70450.37761.4765-0.16911.02620.03630.02550.0325-0.16110.001-0.0631-0.19050.0765-0.03740.29330.0048-0.00650.2870.01830.296840.3382-6.107294.8714
320.9058-1.0331-0.27981.80910.25780.3188-0.1702-0.1291-0.2420.14180.1114-0.09430.2370.23090.05880.26360.08320.02370.27770.02480.29431.6636-15.078590.1574
330.16380.0652-0.19190.1379-0.13350.30110.0643-0.2997-0.08770.1695-0.1494-0.1059-0.18460.41830.08510.2461-0.1968-0.0740.6110.12110.164941.3229-0.052774.1362
343.7840.4596-1.61552.9575-1.18545.3467-0.0427-0.1839-0.14950.1926-0.01-0.07230.10390.16270.05280.1067-0.0054-0.01460.1129-0.01520.124642.6562-5.481667.0258
354.58641.0024-2.30974.0995-1.06185.5479-0.0303-0.1755-0.17330.2924-0.03250.25260.1183-0.27370.06280.11870.0088-0.050.1076-0.00890.118525.6536-14.639983.4858
362.15721.8-2.13373.6868-2.85375.46550.0786-0.0656-0.00060.19250.03550.1789-0.0417-0.1412-0.1140.07340.0196-0.01890.0787-0.02020.096526.45760.162679.2234
376.1922.9753-2.9732.4503-1.87872.72020.1102-0.17130.02350.1129-0.12-0.0364-0.10180.10870.00970.08660.0194-0.01190.0633-0.01440.061929.1663-2.552872.3488
382.49290.3715-0.91862.402-1.01762.57830.02720.0218-0.13830.06520.0159-0.03840.0585-0.0841-0.04310.09370.0664-0.00240.1008-0.00640.053824.0393-1.904981.9703
390.90831.8158-1.59494.2558-3.53893.02270.0592-0.2558-0.09510.3336-0.1848-0.1781-0.17230.25270.12560.22040.04130.00460.267200.218145.444614.126882.646
404.3845-1.1512-0.4171.84591.86542.612-0.00280.21430.1549-0.19980.0639-0.3686-0.25730.357-0.06110.1081-0.01450.01340.19320.07960.280241.55220.22473.5336
411.38580.89160.29291.7194-0.18380.44150.0941-0.1929-0.08890.2033-0.1206-0.1108-0.04440.0830.02650.10220.01210.00260.1173-0.00720.094326.431210.047182.1989
421.4511.6020.46922.73380.28475.8554-0.03890.01120.38990.01570.0104-0.1238-0.59740.17280.02850.1297-0.0049-0.01240.1255-0.00350.432332.615129.780372.6734
430.9039-0.14520.10324.1274-0.04153.63490.0567-0.2367-0.06880.1743-0.0329-0.01860.1099-0.0646-0.02390.14930.00570.02570.14380.00010.1369.416516.025993.91
444.428-1.79421.8922.6811-1.20323.20910.12940.0018-0.1726-0.25030.00230.29330.1143-0.254-0.13160.2237-0.01220.03030.1994-0.01290.19423.74719.631893.8908
452.66010.49050.47011.61420.59211.1430.0305-0.0657-0.1506-0.06670.00890.04690.2083-0.0522-0.03950.2940.00310.01180.3006-0.01090.28750.266519.671596.8314
462.0803-1.42690.80121.1806-0.54260.4558-0.1519-0.15390.20250.06810.090.075-0.1834-0.21710.06190.23250.0605-0.02140.2472-0.01540.25137.518630.085989.5508
470.18580.08010.23450.14570.15110.42270.0763-0.32190.06660.1333-0.1570.14230.2455-0.48290.08070.2358-0.21460.06860.6049-0.1010.17351.345915.48374.5648
483.63040.28651.70532.46581.07516.60930.0058-0.27480.15790.2264-0.06840.0535-0.0875-0.20530.06270.11880.00320.0140.1130.01370.1383-2.298520.399367.7022
494.80731.14942.58414.49481.37276.3963-0.0459-0.13140.20080.2009-0.0101-0.181-0.19120.2080.05590.10950.01360.04090.10620.01060.119313.785329.228282.6496
502.16931.81582.13193.71172.8655.46430.0802-0.07010.00360.19590.0317-0.17650.04210.1355-0.11190.07280.01980.0190.07790.02030.095714.009514.268379.2283
515.61642.72262.89592.38571.93542.78020.1008-0.1563-0.03010.0999-0.11110.03120.0965-0.10350.01020.08180.01870.01130.0590.01550.05811.469517.150272.507
522.55330.45970.92732.51451.0242.56240.02660.0220.13810.06340.01620.0364-0.06150.0832-0.04270.09250.06630.00240.09960.00610.052616.428316.345181.9658
531.11311.55031.40562.72052.29381.99150.1205-0.32630.0160.4788-0.17850.12730.3149-0.21460.05790.25860.06380.01180.29170.01570.2228-4.55270.888784.3956
544.334-0.31870.00160.9523-0.80541.1158-0.03980.1917-0.1468-0.1490.11140.35920.1715-0.348-0.07160.1155-0.0107-0.00950.1963-0.07380.2686-1.8264-5.857573.781
551.38020.8823-0.29791.71320.18050.44680.094-0.19290.09110.2033-0.12040.1120.0434-0.08310.02640.10410.0129-0.00290.11830.00760.096614.04194.394482.2248
561.44061.5794-0.57472.717-0.24245.7814-0.04460.0156-0.38740.01320.00990.12470.5936-0.17410.03470.1305-0.00470.00520.12740.00320.43067.8586-15.364772.7529
Refinement TLS group
IDRefine-IDRefine TLS-IDAuth asym-IDAuth seq-ID
1X-RAY DIFFRACTION1A11 - 16
2X-RAY DIFFRACTION2A17 - 35
3X-RAY DIFFRACTION3A36 - 48
4X-RAY DIFFRACTION4A49 - 66
5X-RAY DIFFRACTION5A67 - 90
6X-RAY DIFFRACTION6A91 - 104
7X-RAY DIFFRACTION7A105 - 119
8X-RAY DIFFRACTION8A120 - 136
9X-RAY DIFFRACTION9A137 - 156
10X-RAY DIFFRACTION10A157 - 184
11X-RAY DIFFRACTION11A185 - 200
12X-RAY DIFFRACTION12A201 - 211
13X-RAY DIFFRACTION13A212 - 266
14X-RAY DIFFRACTION14A267 - 271
15X-RAY DIFFRACTION15B10 - 36
16X-RAY DIFFRACTION16B37 - 50
17X-RAY DIFFRACTION17B51 - 66
18X-RAY DIFFRACTION18B67 - 93
19X-RAY DIFFRACTION19B94 - 103
20X-RAY DIFFRACTION20B104 - 119
21X-RAY DIFFRACTION21B120 - 139
22X-RAY DIFFRACTION22B144 - 159
23X-RAY DIFFRACTION23B160 - 184
24X-RAY DIFFRACTION24B185 - 200
25X-RAY DIFFRACTION25B201 - 211
26X-RAY DIFFRACTION26B212 - 218
27X-RAY DIFFRACTION27B219 - 265
28X-RAY DIFFRACTION28B266 - 271
29X-RAY DIFFRACTION29C12 - 35
30X-RAY DIFFRACTION30C36 - 50
31X-RAY DIFFRACTION31C51 - 68
32X-RAY DIFFRACTION32C71 - 92
33X-RAY DIFFRACTION33C93 - 103
34X-RAY DIFFRACTION34C104 - 119
35X-RAY DIFFRACTION35C120 - 139
36X-RAY DIFFRACTION36C144 - 159
37X-RAY DIFFRACTION37C160 - 184
38X-RAY DIFFRACTION38C185 - 200
39X-RAY DIFFRACTION39C201 - 211
40X-RAY DIFFRACTION40C212 - 218
41X-RAY DIFFRACTION41C219 - 265
42X-RAY DIFFRACTION42C266 - 271
43X-RAY DIFFRACTION43D11 - 36
44X-RAY DIFFRACTION44D37 - 50
45X-RAY DIFFRACTION45D51 - 66
46X-RAY DIFFRACTION46D67 - 90
47X-RAY DIFFRACTION47D91 - 104
48X-RAY DIFFRACTION48D105 - 119
49X-RAY DIFFRACTION49D120 - 139
50X-RAY DIFFRACTION50D144 - 159
51X-RAY DIFFRACTION51D160 - 184
52X-RAY DIFFRACTION52D185 - 200
53X-RAY DIFFRACTION53D201 - 210
54X-RAY DIFFRACTION54D211 - 218
55X-RAY DIFFRACTION55D219 - 265
56X-RAY DIFFRACTION56D266 - 271

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