- PDB-4c2x: Human N-myristoyltransferase isoform 2 (NMT2) -
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Open data
ID or keywords:
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Basic information
Entry
Database: PDB / ID: 4c2x
Title
Human N-myristoyltransferase isoform 2 (NMT2)
Components
GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 2
Keywords
TRANSFERASE / MYRISTOYLATION
Function / homology
Function and homology information
intracellular transport of virus / peptidyl-lysine N6-myristoyltransferase activity / N-terminal peptidyl-glycine N-myristoylation / regulation of opsin-mediated signaling pathway / glycylpeptide N-tetradecanoyltransferase / glycylpeptide N-tetradecanoyltransferase activity / Transferases; Acyltransferases; Transferring groups other than aminoacyl groups / Membrane binding and targetting of GAG proteins / Inactivation, recovery and regulation of the phototransduction cascade / host cell ...intracellular transport of virus / peptidyl-lysine N6-myristoyltransferase activity / N-terminal peptidyl-glycine N-myristoylation / regulation of opsin-mediated signaling pathway / glycylpeptide N-tetradecanoyltransferase / glycylpeptide N-tetradecanoyltransferase activity / Transferases; Acyltransferases; Transferring groups other than aminoacyl groups / Membrane binding and targetting of GAG proteins / Inactivation, recovery and regulation of the phototransduction cascade / host cell / Golgi apparatus / plasma membrane / cytoplasm / cytosol Similarity search - Function
Resolution: 2.33→61.17 Å / Cor.coef. Fo:Fc: 0.949 / Cor.coef. Fo:Fc free: 0.915 / SU B: 11.2 / SU ML: 0.267 / Cross valid method: THROUGHOUT / ESU R: 0.47 / ESU R Free: 0.299 / Stereochemistry target values: MAXIMUM LIKELIHOOD Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.28812
940
5.1 %
RANDOM
Rwork
0.21823
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obs
0.22173
17427
99.77 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK