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Open data
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Basic information
Entry | Database: PDB / ID: 4b2v | ||||||
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Title | S64, a spider venom toxin peptide from Sicarius dolichocephalus | ||||||
![]() | S64 | ||||||
![]() | TOXIN / SPIDER VENOM PEPTIDE / ICK | ||||||
Function / homology | extracellular region / U1-sicaritoxin-Sdo1a![]() | ||||||
Biological species | ![]() | ||||||
Method | SOLUTION NMR / CNS | ||||||
![]() | Loening, N.M. / Wilson, Z.N. / Zobel-Thropp, P.A. / Binford, G.J. | ||||||
![]() | ![]() Title: Solution Structures of Two Homologous Venom Peptides from Sicarius Dolichocephalus Authors: Loening, N.M. / Wilson, Z.N. / Zobel-Thropp, P.A. / Binford, G.J. | ||||||
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 176.2 KB | Display | ![]() |
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PDB format | ![]() | 153.1 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 394.9 KB | Display | ![]() |
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Full document | ![]() | 470.9 KB | Display | |
Data in XML | ![]() | 11.6 KB | Display | |
Data in CIF | ![]() | 18.6 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein/peptide | Mass: 3570.006 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() Description: TRANSCRIPT IDENTIFIED FROM CDNA LIBRARY CONSTRUCTED FROM VENOM GLAND MRNA Organ: VENOM GLAND / Plasmid: PLICC / Production host: ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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NMR details | Text: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C, 15N-LABELED SAMPLES. STRUCTURES CREATED BY ARIA2 WITH WATER REFINEMENT. |
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Sample preparation
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Sample conditions | Ionic strength: 0.02 M / pH: 7.4 / Pressure: 1.0 atm / Temperature: 300.0 K |
-NMR measurement
NMR spectrometer |
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Processing
NMR software |
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Refinement | Method: CNS / Software ordinal: 1 Details: REFINEMENT DETAILS CAN BE FOUND IN THE PLOS ONE CITATION ABOVE. | ||||||||||||||||
NMR ensemble | Conformer selection criteria: TOTAL ENERGY / Conformers calculated total number: 100 / Conformers submitted total number: 20 |